RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 FLAD1Q8NFF5 587 aa28.16■■■□□ 2.1
CIRBP-224ENST00000589686 SCN11AQ9UI33 1791 aa28.15■■■□□ 2.1
CIRBP-224ENST00000589686 AK7Q96M32 723 aa28.15■■■□□ 2.1
CIRBP-224ENST00000589686 SGIP1Q9BQI5 828 aa28.15■■■□□ 2.1
CIRBP-224ENST00000589686 C4BP0C0L5 1744 aa28.15■■■□□ 2.1
CIRBP-224ENST00000589686 RNMTO43148 476 aaKnown RBP28.14■■■□□ 2.1
CIRBP-224ENST00000589686 COL23A1Q86Y22 540 aaPredicted RBP28.14■■■□□ 2.1
CIRBP-224ENST00000589686 LINC00116Q8NCU8 138 aa28.14■■■□□ 2.1
CIRBP-224ENST00000589686 GAS2L2Q8NHY3 880 aa28.14■■■□□ 2.1
CIRBP-224ENST00000589686 LGR6Q9HBX8 967 aa28.14■■■□□ 2.1
CIRBP-224ENST00000589686 MSH5O43196 834 aa28.13■■■□□ 2.09
CIRBP-224ENST00000589686 U2AF1L5P0DN76 240 aaPredicted RBP28.13■■■□□ 2.09
CIRBP-224ENST00000589686 U2AF1Q01081 240 aaKnown RBP eCLIP28.13■■■□□ 2.09
CIRBP-224ENST00000589686 ITPK1Q13572 414 aa28.13■■■□□ 2.09
CIRBP-224ENST00000589686 RBM42Q9BTD8 480 aaKnown RBP28.13■■■□□ 2.09
CIRBP-224ENST00000589686 RSPH6AQ9H0K4 717 aa28.13■■■□□ 2.09
CIRBP-224ENST00000589686 SLC52A2Q9HAB3 445 aa28.13■■■□□ 2.09
CIRBP-224ENST00000589686 PRKAR2BP31323 418 aa28.12■■■□□ 2.09
CIRBP-224ENST00000589686 RALBP1Q15311 655 aa28.11■■■□□ 2.09
CIRBP-224ENST00000589686 FCHSD2O94868 740 aa28.1■■■□□ 2.09
CIRBP-224ENST00000589686 ZNF831Q5JPB2 1677 aa28.1■■■□□ 2.09
CIRBP-224ENST00000589686 POLD1P28340 1107 aa28.09■■■□□ 2.09
CIRBP-224ENST00000589686 SLC4A9Q96Q91 983 aa28.09■■■□□ 2.09
CIRBP-224ENST00000589686 ARXQ96QS3 562 aa28.09■■■□□ 2.09
CIRBP-224ENST00000589686 GNAT3A8MTJ3 354 aa28.08■■■□□ 2.09
CIRBP-224ENST00000589686 PHACTR3Q96KR7 559 aa28.08■■■□□ 2.09
CIRBP-224ENST00000589686 MAP3K5Q99683 1374 aa28.08■■■□□ 2.09
CIRBP-224ENST00000589686 MRC1P22897 1456 aa28.08■■■□□ 2.09
CIRBP-224ENST00000589686 ADAMTS7Q9UKP4 1686 aa28.07■■■□□ 2.08
CIRBP-224ENST00000589686 PTCD1O75127 700 aaKnown RBP28.07■■■□□ 2.08
CIRBP-224ENST00000589686 SSFA2P28290 1259 aa28.06■■■□□ 2.08
CIRBP-224ENST00000589686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.05■■■□□ 2.08
CIRBP-224ENST00000589686 AMIGO3Q86WK7 504 aa28.05■■■□□ 2.08
CIRBP-224ENST00000589686 UBR3Q6ZT12 1888 aa28.04■■■□□ 2.08
CIRBP-224ENST00000589686 COL24A1Q17RW2 1714 aa28.04■■■□□ 2.08
CIRBP-224ENST00000589686 GNPATO15228 680 aa28.04■■■□□ 2.08
CIRBP-224ENST00000589686 PHF14O94880 888 aa28.04■■■□□ 2.08
CIRBP-224ENST00000589686 RC3H1Q5TC82 1133 aaKnown RBP28.04■■■□□ 2.08
CIRBP-224ENST00000589686 FHDC1Q9C0D6 1143 aaPredicted RBP28.04■■■□□ 2.08
CIRBP-224ENST00000589686 VIRMAQ69YN4 1812 aaKnown RBP28.03■■■□□ 2.08
CIRBP-224ENST00000589686 IL17REQ8NFR9 667 aa28.02■■■□□ 2.08
CIRBP-224ENST00000589686 CNTNAP4Q9C0A0 1308 aa28.01■■■□□ 2.07
CIRBP-224ENST00000589686 TEFQ10587 303 aa28.01■■■□□ 2.07
CIRBP-224ENST00000589686 SYT17Q9BSW7 474 aa28.01■■■□□ 2.07
CIRBP-224ENST00000589686 SLC39A6Q13433 755 aa28■■■□□ 2.07
CIRBP-224ENST00000589686 SMIM5Q71RC9 77 aa28■■■□□ 2.07
CIRBP-224ENST00000589686 RTCBQ9Y3I0 505 aaKnown RBP28■■■□□ 2.07
CIRBP-224ENST00000589686 MSL1Q68DK7 614 aa27.99■■■□□ 2.07
CIRBP-224ENST00000589686 COL5A3P25940 1745 aaPredicted RBP27.98■■■□□ 2.07
CIRBP-224ENST00000589686 DCAF8L1A6NGE4 600 aa27.97■■■□□ 2.07
CIRBP-224ENST00000589686 NEFMP07197 916 aa27.97■■■□□ 2.07
CIRBP-224ENST00000589686 CEMIPQ8WUJ3 1361 aa27.97■■■□□ 2.07
CIRBP-224ENST00000589686 MYBBP1AQ9BQG0 1328 aaKnown RBP27.96■■■□□ 2.07
CIRBP-224ENST00000589686 RPS6KA4O75676 772 aa27.96■■■□□ 2.07
CIRBP-224ENST00000589686 TRAPPC3LQ5T215 181 aa27.96■■■□□ 2.07
CIRBP-224ENST00000589686 ADRA2BP18089 450 aa27.95■■■□□ 2.06
CIRBP-224ENST00000589686 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.06
CIRBP-224ENST00000589686 RTF1Q92541 710 aaKnown RBP27.95■■■□□ 2.06
CIRBP-224ENST00000589686 PNNQ9H307 717 aaKnown RBP27.95■■■□□ 2.06
CIRBP-224ENST00000589686 CICQ96RK0 1608 aaPredicted RBP27.95■■■□□ 2.06
CIRBP-224ENST00000589686 TTC5Q8N0Z6 440 aa27.94■■■□□ 2.06
CIRBP-224ENST00000589686 KCPQ6ZWJ8 1503 aa27.93■■■□□ 2.06
CIRBP-224ENST00000589686 HTATSF1O43719 755 aaKnown RBP27.93■■■□□ 2.06
CIRBP-224ENST00000589686 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
CIRBP-224ENST00000589686 TJP1Q07157 1748 aa27.92■■■□□ 2.06
CIRBP-224ENST00000589686 DNAJC10Q8IXB1 793 aa27.92■■■□□ 2.06
CIRBP-224ENST00000589686 ZNF790Q6PG37 636 aa27.91■■■□□ 2.06
CIRBP-224ENST00000589686 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
CIRBP-224ENST00000589686 ARHGEF1Q92888 912 aaKnown RBP27.91■■■□□ 2.06
CIRBP-224ENST00000589686 PLEKHF1Q96S99 279 aa27.91■■■□□ 2.06
CIRBP-224ENST00000589686 MYH14Q7Z406 1995 aaKnown RBP27.91■■■□□ 2.06
CIRBP-224ENST00000589686 SIPA1L3O60292 1781 aaPredicted RBP27.89■■■□□ 2.06
CIRBP-224ENST00000589686 RFC4P35249 363 aa27.89■■■□□ 2.06
CIRBP-224ENST00000589686 UBR2Q8IWV8 1755 aa27.88■■■□□ 2.05
CIRBP-224ENST00000589686 CYP19A1P11511 503 aaPredicted RBP27.88■■■□□ 2.05
CIRBP-224ENST00000589686 INTS5Q6P9B9 1019 aaKnown RBP27.88■■■□□ 2.05
CIRBP-224ENST00000589686 MCM10Q7L590 875 aa27.88■■■□□ 2.05
CIRBP-224ENST00000589686 PRKRIP1Q9H875 184 aaPredicted RBP27.88■■■□□ 2.05
CIRBP-224ENST00000589686 CCDC87Q9NVE4 849 aa27.88■■■□□ 2.05
CIRBP-224ENST00000589686 BTBD11A6QL63 1104 aa27.87■■■□□ 2.05
CIRBP-224ENST00000589686 ZNF496Q96IT1 587 aaPredicted RBP27.86■■■□□ 2.05
CIRBP-224ENST00000589686 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
CIRBP-224ENST00000589686 NLGN1Q8N2Q7 840 aa27.85■■■□□ 2.05
CIRBP-224ENST00000589686 DCTN1Q14203 1278 aa27.84■■■□□ 2.05
CIRBP-224ENST00000589686 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
CIRBP-224ENST00000589686 FMNL2Q96PY5 1086 aa27.84■■■□□ 2.05
CIRBP-224ENST00000589686 TEX13AQ9BXU3 409 aaPredicted RBP27.84■■■□□ 2.05
CIRBP-224ENST00000589686 HEG1Q9ULI3 1381 aa27.84■■■□□ 2.05
CIRBP-224ENST00000589686 STARD3NLO95772 234 aa27.83■■■□□ 2.05
CIRBP-224ENST00000589686 CD2APQ9Y5K6 639 aa27.83■■■□□ 2.05
CIRBP-224ENST00000589686 GYS1P13807 737 aa27.82■■■□□ 2.04
CIRBP-224ENST00000589686 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
CIRBP-224ENST00000589686 NLGN2Q8NFZ4 835 aa27.81■■■□□ 2.04
CIRBP-224ENST00000589686 SOS1Q07889 1333 aaPredicted RBP27.81■■■□□ 2.04
CIRBP-224ENST00000589686 MMP10P09238 476 aa27.8■■■□□ 2.04
CIRBP-224ENST00000589686 KCNQ3O43525 872 aa27.79■■■□□ 2.04
CIRBP-224ENST00000589686 TAF7Q15545 349 aaPredicted RBP27.79■■■□□ 2.04
CIRBP-224ENST00000589686 ZBTB1Q9Y2K1 713 aa27.79■■■□□ 2.04
CIRBP-224ENST00000589686 C4AP0C0L4 1744 aa27.78■■■□□ 2.04
CIRBP-224ENST00000589686 USP42Q9H9J4 1324 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms