RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
APOC1-204ENST00000589078 U2SURPO15042 1029 aaKnown RBP12.95□□□□□ -0.34
APOC1-204ENST00000589078 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
APOC1-204ENST00000589078 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
APOC1-204ENST00000589078 KDRP35968 1356 aa12.94□□□□□ -0.34
APOC1-204ENST00000589078 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
APOC1-204ENST00000589078 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
APOC1-204ENST00000589078 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
APOC1-204ENST00000589078 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
APOC1-204ENST00000589078 CYP27B1O15528 508 aa12.92□□□□□ -0.34
APOC1-204ENST00000589078 HMOX1P09601 288 aa12.92□□□□□ -0.34
APOC1-204ENST00000589078 C1orf141Q5JVX7 400 aa12.92□□□□□ -0.34
APOC1-204ENST00000589078 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
APOC1-204ENST00000589078 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
APOC1-204ENST00000589078 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
APOC1-204ENST00000589078 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
APOC1-204ENST00000589078 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
APOC1-204ENST00000589078 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
APOC1-204ENST00000589078 KIF3CO14782 793 aa12.9□□□□□ -0.34
APOC1-204ENST00000589078 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
APOC1-204ENST00000589078 PHKG2P15735 406 aa12.9□□□□□ -0.34
APOC1-204ENST00000589078 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
APOC1-204ENST00000589078 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
APOC1-204ENST00000589078 NEFMP07197 916 aa12.89□□□□□ -0.35
APOC1-204ENST00000589078 ITGB4P16144 1822 aa12.89□□□□□ -0.35
APOC1-204ENST00000589078 PCNTO95613 3336 aa12.89□□□□□ -0.35
APOC1-204ENST00000589078 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
APOC1-204ENST00000589078 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
APOC1-204ENST00000589078 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
APOC1-204ENST00000589078 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
APOC1-204ENST00000589078 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
APOC1-204ENST00000589078 PALLDQ8WX93 1383 aa12.88□□□□□ -0.35
APOC1-204ENST00000589078 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
APOC1-204ENST00000589078 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
APOC1-204ENST00000589078 FCHSD2O94868 740 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 APLP1P51693 650 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
APOC1-204ENST00000589078 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
APOC1-204ENST00000589078 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
APOC1-204ENST00000589078 ANP32CO43423 234 aa12.86□□□□□ -0.35
APOC1-204ENST00000589078 PHF14O94880 888 aa12.86□□□□□ -0.35
APOC1-204ENST00000589078 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
APOC1-204ENST00000589078 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
APOC1-204ENST00000589078 N4BP2Q86UW6 1770 aaPredicted RBP12.85□□□□□ -0.35
APOC1-204ENST00000589078 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
APOC1-204ENST00000589078 SMIM5Q71RC9 77 aa12.85□□□□□ -0.35
APOC1-204ENST00000589078 AK7Q96M32 723 aa12.85□□□□□ -0.35
APOC1-204ENST00000589078 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
APOC1-204ENST00000589078 CABP4P57796 275 aa12.84□□□□□ -0.35
APOC1-204ENST00000589078 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
APOC1-204ENST00000589078 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
APOC1-204ENST00000589078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
APOC1-204ENST00000589078 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOC1-204ENST00000589078 PIGBQ92521 554 aa12.83□□□□□ -0.36
APOC1-204ENST00000589078 PXDNLA1KZ92 1463 aa12.83□□□□□ -0.36
APOC1-204ENST00000589078 TOMM70O94826 608 aa12.82□□□□□ -0.36
APOC1-204ENST00000589078 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
APOC1-204ENST00000589078 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
APOC1-204ENST00000589078 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
APOC1-204ENST00000589078 SSFA2P28290 1259 aa12.8□□□□□ -0.36
APOC1-204ENST00000589078 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
APOC1-204ENST00000589078 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
APOC1-204ENST00000589078 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
APOC1-204ENST00000589078 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
APOC1-204ENST00000589078 PHACTR3Q96KR7 559 aa12.79□□□□□ -0.36
APOC1-204ENST00000589078 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
APOC1-204ENST00000589078 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
APOC1-204ENST00000589078 CAPN15O75808 1086 aa12.78□□□□□ -0.36
APOC1-204ENST00000589078 TEFQ10587 303 aa12.78□□□□□ -0.36
APOC1-204ENST00000589078 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
APOC1-204ENST00000589078 C10orf71Q711Q0 1435 aa12.78□□□□□ -0.36
APOC1-204ENST00000589078 LOC102724428A0A0B4J2F2 783 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 GNPATO15228 680 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
APOC1-204ENST00000589078 MMP10P09238 476 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 SIK1P57059 783 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 HTRA3P83110 453 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.37
APOC1-204ENST00000589078 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
APOC1-204ENST00000589078 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
APOC1-204ENST00000589078 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
APOC1-204ENST00000589078 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
APOC1-204ENST00000589078 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
APOC1-204ENST00000589078 ITPK1Q13572 414 aa12.75□□□□□ -0.37
APOC1-204ENST00000589078 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
APOC1-204ENST00000589078 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
APOC1-204ENST00000589078 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
APOC1-204ENST00000589078 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
APOC1-204ENST00000589078 TNRC6CQ9HCJ0 1690 aaKnown RBP12.75□□□□□ -0.37
APOC1-204ENST00000589078 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
APOC1-204ENST00000589078 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms