RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 ARXQ96QS3 562 aa27.88■■■□□ 2.05
MBD3-205ENST00000589064 LGR6Q9HBX8 967 aa27.88■■■□□ 2.05
MBD3-205ENST00000589064 SMIM5Q71RC9 77 aa27.86■■■□□ 2.05
MBD3-205ENST00000589064 FHDC1Q9C0D6 1143 aaPredicted RBP27.86■■■□□ 2.05
MBD3-205ENST00000589064 FLAD1Q8NFF5 587 aa27.85■■■□□ 2.05
MBD3-205ENST00000589064 SLC4A9Q96Q91 983 aa27.85■■■□□ 2.05
MBD3-205ENST00000589064 POLD1P28340 1107 aa27.84■■■□□ 2.05
MBD3-205ENST00000589064 AMIGO3Q86WK7 504 aa27.84■■■□□ 2.05
MBD3-205ENST00000589064 RNMTO43148 476 aaKnown RBP27.83■■■□□ 2.05
MBD3-205ENST00000589064 SYT17Q9BSW7 474 aa27.83■■■□□ 2.05
MBD3-205ENST00000589064 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
MBD3-205ENST00000589064 PHF14O94880 888 aa27.83■■■□□ 2.04
MBD3-205ENST00000589064 PTCD1O75127 700 aaKnown RBP27.82■■■□□ 2.04
MBD3-205ENST00000589064 MSL1Q68DK7 614 aa27.81■■■□□ 2.04
MBD3-205ENST00000589064 SLC52A2Q9HAB3 445 aa27.81■■■□□ 2.04
MBD3-205ENST00000589064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.8■■■□□ 2.04
MBD3-205ENST00000589064 GNPATO15228 680 aa27.79■■■□□ 2.04
MBD3-205ENST00000589064 DDX10Q13206 875 aaKnown RBP27.79■■■□□ 2.04
MBD3-205ENST00000589064 U2AF1L5P0DN76 240 aaPredicted RBP27.78■■■□□ 2.04
MBD3-205ENST00000589064 U2AF1Q01081 240 aaKnown RBP eCLIP27.78■■■□□ 2.04
MBD3-205ENST00000589064 C5P01031 1676 aa27.78■■■□□ 2.04
MBD3-205ENST00000589064 PRKAR2BP31323 418 aa27.77■■■□□ 2.04
MBD3-205ENST00000589064 PHACTR3Q96KR7 559 aa27.77■■■□□ 2.04
MBD3-205ENST00000589064 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
MBD3-205ENST00000589064 DCAF8L1A6NGE4 600 aa27.76■■■□□ 2.04
MBD3-205ENST00000589064 SSFA2P28290 1259 aa27.76■■■□□ 2.04
MBD3-205ENST00000589064 KLHL34Q8N239 644 aa27.76■■■□□ 2.04
MBD3-205ENST00000589064 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.04
MBD3-205ENST00000589064 C4BP0C0L5 1744 aa27.76■■■□□ 2.03
MBD3-205ENST00000589064 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
MBD3-205ENST00000589064 TUBGCP6Q96RT7 1819 aa27.74■■■□□ 2.03
MBD3-205ENST00000589064 GNAT3A8MTJ3 354 aa27.74■■■□□ 2.03
MBD3-205ENST00000589064 SLC39A6Q13433 755 aa27.74■■■□□ 2.03
MBD3-205ENST00000589064 RC3H1Q5TC82 1133 aaKnown RBP27.73■■■□□ 2.03
MBD3-205ENST00000589064 IL17REQ8NFR9 667 aa27.73■■■□□ 2.03
MBD3-205ENST00000589064 RTCBQ9Y3I0 505 aaKnown RBP27.72■■■□□ 2.03
MBD3-205ENST00000589064 TAF1LQ8IZX4 1826 aa27.72■■■□□ 2.03
MBD3-205ENST00000589064 FCHSD2O94868 740 aa27.71■■■□□ 2.03
MBD3-205ENST00000589064 TRAPPC3LQ5T215 181 aa27.7■■■□□ 2.03
MBD3-205ENST00000589064 MAP3K5Q99683 1374 aa27.7■■■□□ 2.03
MBD3-205ENST00000589064 CNTNAP4Q9C0A0 1308 aa27.69■■■□□ 2.02
MBD3-205ENST00000589064 RPS6KA4O75676 772 aa27.69■■■□□ 2.02
MBD3-205ENST00000589064 CRKLP46109 303 aaKnown RBP27.67■■■□□ 2.02
MBD3-205ENST00000589064 TEFQ10587 303 aa27.67■■■□□ 2.02
MBD3-205ENST00000589064 ARHGEF1Q92888 912 aaKnown RBP27.67■■■□□ 2.02
MBD3-205ENST00000589064 RALBP1Q15311 655 aa27.66■■■□□ 2.02
MBD3-205ENST00000589064 DNAJC10Q8IXB1 793 aa27.66■■■□□ 2.02
MBD3-205ENST00000589064 SCN11AQ9UI33 1791 aa27.64■■■□□ 2.02
MBD3-205ENST00000589064 MRC1P22897 1456 aa27.64■■■□□ 2.02
MBD3-205ENST00000589064 NLGN2Q8NFZ4 835 aa27.64■■■□□ 2.01
MBD3-205ENST00000589064 ADRA2BP18089 450 aa27.63■■■□□ 2.01
MBD3-205ENST00000589064 INTS5Q6P9B9 1019 aaKnown RBP27.63■■■□□ 2.01
MBD3-205ENST00000589064 RFC4P35249 363 aa27.62■■■□□ 2.01
MBD3-205ENST00000589064 ZEB1P37275 1124 aaPredicted RBP27.62■■■□□ 2.01
MBD3-205ENST00000589064 UBR3Q6ZT12 1888 aa27.61■■■□□ 2.01
MBD3-205ENST00000589064 TTC5Q8N0Z6 440 aa27.61■■■□□ 2.01
MBD3-205ENST00000589064 COL24A1Q17RW2 1714 aa27.61■■■□□ 2.01
MBD3-205ENST00000589064 CYP19A1P11511 503 aaPredicted RBP27.6■■■□□ 2.01
MBD3-205ENST00000589064 RTF1Q92541 710 aaKnown RBP27.6■■■□□ 2.01
MBD3-205ENST00000589064 CCDC87Q9NVE4 849 aa27.59■■■□□ 2.01
MBD3-205ENST00000589064 GPR162Q16538 588 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 ZNF790Q6PG37 636 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 MCM10Q7L590 875 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 VSIG10Q8N0Z9 540 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 NLGN1Q8N2Q7 840 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 ZNF831Q5JPB2 1677 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 CEMIPQ8WUJ3 1361 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 ADAMTS7Q9UKP4 1686 aa27.58■■■□□ 2.01
MBD3-205ENST00000589064 CD2APQ9Y5K6 639 aa27.57■■■□□ 2
MBD3-205ENST00000589064 MMP10P09238 476 aa27.57■■■□□ 2
MBD3-205ENST00000589064 GYS1P13807 737 aa27.57■■■□□ 2
MBD3-205ENST00000589064 DCTN1Q14203 1278 aa27.57■■■□□ 2
MBD3-205ENST00000589064 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
MBD3-205ENST00000589064 ZNF496Q96IT1 587 aaPredicted RBP27.57■■■□□ 2
MBD3-205ENST00000589064 BTBD11A6QL63 1104 aa27.56■■■□□ 2
MBD3-205ENST00000589064 NEFMP07197 916 aa27.56■■■□□ 2
MBD3-205ENST00000589064 YY1P25490 414 aa27.56■■■□□ 2
MBD3-205ENST00000589064 KCNQ3O43525 872 aa27.55■■■□□ 2
MBD3-205ENST00000589064 PLEKHF1Q96S99 279 aa27.55■■■□□ 2
MBD3-205ENST00000589064 SRP68Q9UHB9 627 aaKnown RBP27.55■■■□□ 2
MBD3-205ENST00000589064 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
MBD3-205ENST00000589064 HTATSF1O43719 755 aaKnown RBP27.54■■■□□ 2
MBD3-205ENST00000589064 MYBBP1AQ9BQG0 1328 aaKnown RBP27.52■■■□□ 2
MBD3-205ENST00000589064 ZBTB1Q9Y2K1 713 aa27.51■■■□□ 2
MBD3-205ENST00000589064 COL5A3P25940 1745 aaPredicted RBP27.51■■□□□ 1.99
MBD3-205ENST00000589064 STARD3NLO95772 234 aa27.51■■□□□ 1.99
MBD3-205ENST00000589064 FMNL2Q96PY5 1086 aa27.51■■□□□ 1.99
MBD3-205ENST00000589064 PNNQ9H307 717 aaKnown RBP27.51■■□□□ 1.99
MBD3-205ENST00000589064 MYH14Q7Z406 1995 aaKnown RBP27.5■■□□□ 1.99
MBD3-205ENST00000589064 SOS1Q07889 1333 aaPredicted RBP27.5■■□□□ 1.99
MBD3-205ENST00000589064 CANXP27824 592 aaKnown RBP27.5■■□□□ 1.99
MBD3-205ENST00000589064 HEG1Q9ULI3 1381 aa27.49■■□□□ 1.99
MBD3-205ENST00000589064 TJP1Q07157 1748 aa27.49■■□□□ 1.99
MBD3-205ENST00000589064 USP42Q9H9J4 1324 aaKnown RBP27.49■■□□□ 1.99
MBD3-205ENST00000589064 FKBP8Q14318 412 aa27.49■■□□□ 1.99
MBD3-205ENST00000589064 TEX13AQ9BXU3 409 aaPredicted RBP27.49■■□□□ 1.99
MBD3-205ENST00000589064 ZPR1O75312 459 aa27.47■■□□□ 1.99
MBD3-205ENST00000589064 NFE2L2Q16236 605 aa27.47■■□□□ 1.99
MBD3-205ENST00000589064 PARP3Q9Y6F1 533 aa27.47■■□□□ 1.99
MBD3-205ENST00000589064 YBX3P16989 372 aaKnown RBP eCLIP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms