RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 CCDC9Q9Y3X0 531 aaKnown RBP39.95■■■■□ 3.99
CAPNS1-206ENST00000588815 C8orf58Q8NAV2 365 aa39.94■■■■□ 3.98
CAPNS1-206ENST00000588815 MIS18AQ9NYP9 233 aa39.94■■■■□ 3.98
CAPNS1-206ENST00000588815 BTBD11A6QL63 1104 aa39.94■■■■□ 3.98
CAPNS1-206ENST00000588815 BCAR3O75815 825 aa39.93■■■■□ 3.98
CAPNS1-206ENST00000588815 ERVV-2B6SEH9 535 aa39.92■■■■□ 3.98
CAPNS1-206ENST00000588815 TSPYL6Q8N831 410 aa39.92■■■■□ 3.98
CAPNS1-206ENST00000588815 BRPF1P55201 1214 aaPredicted RBP39.9■■■■□ 3.98
CAPNS1-206ENST00000588815 DDX54Q8TDD1 881 aaKnown RBP39.9■■■■□ 3.98
CAPNS1-206ENST00000588815 TOGARAM1Q9Y4F4 1720 aa39.9■■■■□ 3.98
CAPNS1-206ENST00000588815 ITGB4P16144 1822 aa39.89■■■■□ 3.98
CAPNS1-206ENST00000588815 AFF2P51816 1311 aa39.88■■■■□ 3.98
CAPNS1-206ENST00000588815 SMC4Q9NTJ3 1288 aa39.88■■■■□ 3.97
CAPNS1-206ENST00000588815 SSH1Q8WYL5 1049 aa39.87■■■■□ 3.97
CAPNS1-206ENST00000588815 CHMP4AQ9BY43 222 aa39.87■■■■□ 3.97
CAPNS1-206ENST00000588815 DDB1Q16531 1140 aa39.86■■■■□ 3.97
CAPNS1-206ENST00000588815 CABP4P57796 275 aa39.85■■■■□ 3.97
CAPNS1-206ENST00000588815 KIF16BQ96L93 1317 aa39.84■■■■□ 3.97
CAPNS1-206ENST00000588815 ELL2O00472 640 aaPredicted RBP39.84■■■■□ 3.97
CAPNS1-206ENST00000588815 HOXB7P09629 217 aa39.84■■■■□ 3.97
CAPNS1-206ENST00000588815 FBXO41Q8TF61 875 aa39.84■■■■□ 3.97
CAPNS1-206ENST00000588815 THSD7AQ9UPZ6 1657 aa39.83■■■■□ 3.97
CAPNS1-206ENST00000588815 PAPPAQ13219 1627 aa39.83■■■■□ 3.97
CAPNS1-206ENST00000588815 EIF4A1P60842 406 aaKnown RBP39.83■■■■□ 3.97
CAPNS1-206ENST00000588815 NFATC2IPQ8NCF5 419 aa39.83■■■■□ 3.97
CAPNS1-206ENST00000588815 ATRNO75882 1429 aa39.83■■■■□ 3.97
CAPNS1-206ENST00000588815 KAT6BQ8WYB5 2073 aa39.82■■■■□ 3.97
CAPNS1-206ENST00000588815 GLI3P10071 1580 aa39.81■■■■□ 3.96
CAPNS1-206ENST00000588815 UBR2Q8IWV8 1755 aa39.81■■■■□ 3.96
CAPNS1-206ENST00000588815 PLIN1O60240 522 aa39.81■■■■□ 3.96
CAPNS1-206ENST00000588815 IRX6P78412 446 aaPredicted RBP39.81■■■■□ 3.96
CAPNS1-206ENST00000588815 TRPC5Q9UL62 973 aaPredicted RBP39.81■■■■□ 3.96
CAPNS1-206ENST00000588815 KRT24Q2M2I5 525 aa39.8■■■■□ 3.96
CAPNS1-206ENST00000588815 CANXP27824 592 aaKnown RBP39.79■■■■□ 3.96
CAPNS1-206ENST00000588815 PDE3AQ14432 1141 aa39.79■■■■□ 3.96
CAPNS1-206ENST00000588815 BCL2L13Q9BXK5 485 aa39.79■■■■□ 3.96
CAPNS1-206ENST00000588815 HEG1Q9ULI3 1381 aa39.78■■■■□ 3.96
CAPNS1-206ENST00000588815 ZNF790Q6PG37 636 aa39.78■■■■□ 3.96
CAPNS1-206ENST00000588815 DOT1LQ8TEK3 1739 aa39.77■■■■□ 3.96
CAPNS1-206ENST00000588815 MS4A1P11836 297 aa39.77■■■■□ 3.96
CAPNS1-206ENST00000588815 IPO8O15397 1037 aaKnown RBP39.76■■■■□ 3.96
CAPNS1-206ENST00000588815 GJD4Q96KN9 370 aaPredicted RBP39.76■■■■□ 3.96
CAPNS1-206ENST00000588815 ZKSCAN2Q63HK3 967 aa39.75■■■■□ 3.95
CAPNS1-206ENST00000588815 FAM98CQ17RN3 349 aaKnown RBP39.75■■■■□ 3.95
CAPNS1-206ENST00000588815 MRPL50Q8N5N7 158 aaKnown RBP39.75■■■■□ 3.95
CAPNS1-206ENST00000588815 FRAT1Q92837 279 aaPredicted RBP39.75■■■■□ 3.95
CAPNS1-206ENST00000588815 CCDC30Q5VVM6 783 aa39.72■■■■□ 3.95
CAPNS1-206ENST00000588815 TTC5Q8N0Z6 440 aa39.72■■■■□ 3.95
CAPNS1-206ENST00000588815 ARHGAP45Q92619 1136 aa39.72■■■■□ 3.95
CAPNS1-206ENST00000588815 KCNQ3O43525 872 aa39.71■■■■□ 3.95
CAPNS1-206ENST00000588815 LAMB4A4D0S4 1761 aa39.7■■■■□ 3.95
CAPNS1-206ENST00000588815 TMOD3Q9NYL9 352 aa39.69■■■■□ 3.94
CAPNS1-206ENST00000588815 C5P01031 1676 aa39.68■■■■□ 3.94
CAPNS1-206ENST00000588815 STK31Q9BXU1 1019 aa39.68■■■■□ 3.94
CAPNS1-206ENST00000588815 ONECUT3O60422 494 aaPredicted RBP39.67■■■■□ 3.94
CAPNS1-206ENST00000588815 GIGYF1O75420 1035 aaPredicted RBP39.67■■■■□ 3.94
CAPNS1-206ENST00000588815 ATF7IPQ6VMQ6 1270 aa39.67■■■■□ 3.94
CAPNS1-206ENST00000588815 NOB1Q9ULX3 412 aaKnown RBP39.67■■■■□ 3.94
CAPNS1-206ENST00000588815 SLC39A6Q13433 755 aa39.65■■■■□ 3.94
CAPNS1-206ENST00000588815 FMNL2Q96PY5 1086 aa39.65■■■■□ 3.94
CAPNS1-206ENST00000588815 C20orf194Q5TEA3 1177 aa39.64■■■■□ 3.94
CAPNS1-206ENST00000588815 MARCH10Q8NA82 808 aaPredicted RBP39.64■■■■□ 3.94
CAPNS1-206ENST00000588815 HDGFL1Q5TGJ6 251 aa39.63■■■■□ 3.94
CAPNS1-206ENST00000588815 QTRT2Q9H974 415 aaKnown RBP39.63■■■■□ 3.94
CAPNS1-206ENST00000588815 BCL9O00512 1426 aa39.63■■■■□ 3.93
CAPNS1-206ENST00000588815 ZNF772Q68DY9 489 aaPredicted RBP39.62■■■■□ 3.93
CAPNS1-206ENST00000588815 PTPRCP08575 1304 aa39.61■■■■□ 3.93
CAPNS1-206ENST00000588815 TRIM27P14373 513 aa39.61■■■■□ 3.93
CAPNS1-206ENST00000588815 DZIP1LQ8IYY4 767 aaKnown RBP39.61■■■■□ 3.93
CAPNS1-206ENST00000588815 KCPQ6ZWJ8 1503 aa39.6■■■■□ 3.93
CAPNS1-206ENST00000588815 PPP4R2Q9NY27 417 aa39.6■■■■□ 3.93
CAPNS1-206ENST00000588815 SLC4A2P04920 1241 aa39.59■■■■□ 3.93
CAPNS1-206ENST00000588815 FTSJ3Q8IY81 847 aaKnown RBP39.59■■■■□ 3.93
CAPNS1-206ENST00000588815 ZNF496Q96IT1 587 aaPredicted RBP39.59■■■■□ 3.93
CAPNS1-206ENST00000588815 CRBNQ96SW2 442 aa39.59■■■■□ 3.93
CAPNS1-206ENST00000588815 API5Q9BZZ5 524 aaKnown RBP39.59■■■■□ 3.93
CAPNS1-206ENST00000588815 SNRPA1P09661 255 aaKnown RBP39.58■■■■□ 3.93
CAPNS1-206ENST00000588815 A0A0G2JS52 829 aa39.57■■■■□ 3.93
CAPNS1-206ENST00000588815 TCERG1O14776 1098 aaKnown RBP39.57■■■■□ 3.93
CAPNS1-206ENST00000588815 MYT1Q01538 1121 aa39.57■■■■□ 3.93
CAPNS1-206ENST00000588815 EXOC6Q8TAG9 804 aa39.56■■■■□ 3.92
CAPNS1-206ENST00000588815 PIGBQ92521 554 aa39.56■■■■□ 3.92
CAPNS1-206ENST00000588815 AAMPQ13685 434 aa39.54■■■■□ 3.92
CAPNS1-206ENST00000588815 PANK1Q8TE04 598 aa39.53■■■■□ 3.92
CAPNS1-206ENST00000588815 EIF2S2P20042 333 aaKnown RBP39.52■■■■□ 3.92
CAPNS1-206ENST00000588815 DBF4Q9UBU7 674 aaPredicted RBP39.52■■■■□ 3.92
CAPNS1-206ENST00000588815 N4BP2Q86UW6 1770 aaPredicted RBP39.51■■■■□ 3.92
CAPNS1-206ENST00000588815 SBF2Q86WG5 1849 aa39.51■■■■□ 3.92
CAPNS1-206ENST00000588815 RLBP1P12271 317 aa39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 PRIM1P49642 420 aaKnown RBP39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 CLUAP1Q96AJ1 413 aa39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 VSIG10Q8N0Z9 540 aa39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 NHSQ6T4R5 1651 aa39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 ABCC4O15439 1325 aa39.49■■■■□ 3.91
CAPNS1-206ENST00000588815 BRWD3Q6RI45 1802 aa39.48■■■■□ 3.91
CAPNS1-206ENST00000588815 MVPQ14764 893 aaKnown RBP39.48■■■■□ 3.91
CAPNS1-206ENST00000588815 ATG3Q9NT62 314 aa39.48■■■■□ 3.91
CAPNS1-206ENST00000588815 SEPT12Q8IYM1 358 aa39.47■■■■□ 3.91
CAPNS1-206ENST00000588815 NECTIN2Q92692 538 aa39.47■■■■□ 3.91
CAPNS1-206ENST00000588815 SYTL4Q96C24 671 aaPredicted RBP39.47■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms