RNA–Protein interactions for RNA: ENST00000588216.5

TNPO2-210, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-210ENST00000588216 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
TNPO2-210ENST00000588216 AAMPQ13685 434 aa15.12■□□□□ 0.01
TNPO2-210ENST00000588216 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
TNPO2-210ENST00000588216 ABCC4O15439 1325 aa15.12■□□□□ 0.01
TNPO2-210ENST00000588216 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
TNPO2-210ENST00000588216 DCCP43146 1447 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 BTBD11A6QL63 1104 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 ANXA1P04083 346 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 PRDM11Q9NQV5 511 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 SLIT3O75094 1523 aa15.11■□□□□ 0.01
TNPO2-210ENST00000588216 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
TNPO2-210ENST00000588216 USP54Q70EL1 1684 aa15.1■□□□□ 0.01
TNPO2-210ENST00000588216 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
TNPO2-210ENST00000588216 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
TNPO2-210ENST00000588216 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
TNPO2-210ENST00000588216 NCOA3Q9Y6Q9 1424 aa15.1■□□□□ 0.01
TNPO2-210ENST00000588216 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 PXDNQ92626 1479 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 AMOTQ4VCS5 1084 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
TNPO2-210ENST00000588216 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
TNPO2-210ENST00000588216 RGPD5Q99666 1765 aa15.09■□□□□ 0.01
TNPO2-210ENST00000588216 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0.01
TNPO2-210ENST00000588216 MEIS3Q99687 375 aa15.08■□□□□ 0.01
TNPO2-210ENST00000588216 STRN4Q9NRL3 753 aa15.08■□□□□ 0.01
TNPO2-210ENST00000588216 PRAMEF22A3QJZ6 481 aa15.08■□□□□ 0
TNPO2-210ENST00000588216 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
TNPO2-210ENST00000588216 CCDC30Q5VVM6 783 aa15.08■□□□□ 0
TNPO2-210ENST00000588216 APBB1O00213 710 aa15.08■□□□□ 0
TNPO2-210ENST00000588216 SLC39A6Q13433 755 aa15.08■□□□□ 0
TNPO2-210ENST00000588216 FLIIQ13045 1269 aa15.07■□□□□ 0
TNPO2-210ENST00000588216 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
TNPO2-210ENST00000588216 TATP17735 454 aaPredicted RBP15.07■□□□□ 0
TNPO2-210ENST00000588216 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
TNPO2-210ENST00000588216 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
TNPO2-210ENST00000588216 SEC24BO95487 1268 aa15.06■□□□□ 0
TNPO2-210ENST00000588216 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
TNPO2-210ENST00000588216 TOM1L2Q6ZVM7 507 aa15.06■□□□□ 0
TNPO2-210ENST00000588216 ALS2Q96Q42 1657 aa15.05■□□□□ 0
TNPO2-210ENST00000588216 INTS3Q68E01 1043 aaKnown RBP15.05■□□□□ 0
TNPO2-210ENST00000588216 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ 0
TNPO2-210ENST00000588216 RGS12O14924 1447 aa15.05■□□□□ -0
TNPO2-210ENST00000588216 SMC5Q8IY18 1101 aa15.05■□□□□ -0
TNPO2-210ENST00000588216 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
TNPO2-210ENST00000588216 PANK2Q9BZ23 570 aa15.05■□□□□ -0
TNPO2-210ENST00000588216 PTPRCP08575 1304 aa15.05■□□□□ -0
TNPO2-210ENST00000588216 TPM2P07951 284 aa15.04■□□□□ -0
TNPO2-210ENST00000588216 PDCL3Q9H2J4 239 aa15.04■□□□□ -0
TNPO2-210ENST00000588216 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
TNPO2-210ENST00000588216 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
TNPO2-210ENST00000588216 MRE11P49959 708 aa15.04■□□□□ -0
TNPO2-210ENST00000588216 ESPNB1AK53 854 aa15.02■□□□□ -0
TNPO2-210ENST00000588216 CHMP4BQ9H444 224 aaKnown RBP15.02■□□□□ -0
TNPO2-210ENST00000588216 CYP27B1O15528 508 aa15.02□□□□□ -0.01
TNPO2-210ENST00000588216 EVA1CP58658 441 aa15.02□□□□□ -0.01
TNPO2-210ENST00000588216 MEGF6O75095 1541 aa15.01□□□□□ -0.01
TNPO2-210ENST00000588216 PHKG2P15735 406 aa15.01□□□□□ -0.01
TNPO2-210ENST00000588216 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
TNPO2-210ENST00000588216 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
TNPO2-210ENST00000588216 MCM4P33991 863 aa15.01□□□□□ -0.01
TNPO2-210ENST00000588216 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
TNPO2-210ENST00000588216 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
TNPO2-210ENST00000588216 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
TNPO2-210ENST00000588216 NUCB1Q02818 461 aa15□□□□□ -0.01
TNPO2-210ENST00000588216 PROSER3Q2NL68 480 aa15□□□□□ -0.01
TNPO2-210ENST00000588216 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
TNPO2-210ENST00000588216 IFNL2Q8IZJ0 200 aa15□□□□□ -0.01
TNPO2-210ENST00000588216 AIMP1Q12904 312 aaKnown RBP14.99□□□□□ -0.01
TNPO2-210ENST00000588216 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
TNPO2-210ENST00000588216 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
TNPO2-210ENST00000588216 ARXQ96QS3 562 aa14.99□□□□□ -0.01
TNPO2-210ENST00000588216 PHRF1Q9P1Y6 1649 aaKnown RBP14.99□□□□□ -0.01
TNPO2-210ENST00000588216 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
TNPO2-210ENST00000588216 GIGYF1O75420 1035 aaPredicted RBP14.98□□□□□ -0.01
TNPO2-210ENST00000588216 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
TNPO2-210ENST00000588216 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
TNPO2-210ENST00000588216 SMARCA5O60264 1052 aaPredicted RBP14.98□□□□□ -0.01
TNPO2-210ENST00000588216 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
TNPO2-210ENST00000588216 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
TNPO2-210ENST00000588216 ZNF790Q6PG37 636 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 SLC52A2Q9HAB3 445 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 MYL6BP14649 208 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 GCC1Q96CN9 775 aa14.97□□□□□ -0.01
TNPO2-210ENST00000588216 ANKRD44Q8N8A2 993 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 BTG4Q9NY30 223 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 CAMTA1Q9Y6Y1 1673 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 CPDO75976 1380 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 PIP4K2BP78356 416 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 GRPEL1Q9HAV7 217 aa14.96□□□□□ -0.01
TNPO2-210ENST00000588216 ZNF496Q96IT1 587 aaPredicted RBP14.96□□□□□ -0.02
TNPO2-210ENST00000588216 TBC1D2Q9BYX2 928 aa14.96□□□□□ -0.02
TNPO2-210ENST00000588216 KDM6AO15550 1401 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms