RNA–Protein interactions for RNA: ENST00000587722.1

BLOC1S3-202, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 BASIC

Gene BLOC1S3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-202ENST00000587722 LINC00116Q8NCU8 138 aa33.78■■■■□ 3
BLOC1S3-202ENST00000587722 COL3A1P02461 1466 aaPredicted RBP33.77■■■■□ 3
BLOC1S3-202ENST00000587722 HMOX1P09601 288 aa33.77■■■■□ 3
BLOC1S3-202ENST00000587722 CABP4P57796 275 aa33.77■■■■□ 3
BLOC1S3-202ENST00000587722 UBR3Q6ZT12 1888 aa33.77■■■■□ 3
BLOC1S3-202ENST00000587722 ATP6V1AP38606 617 aa33.76■■■□□ 2.99
BLOC1S3-202ENST00000587722 ITPK1Q13572 414 aa33.76■■■□□ 2.99
BLOC1S3-202ENST00000587722 AMIGO3Q86WK7 504 aa33.74■■■□□ 2.99
BLOC1S3-202ENST00000587722 ZNF831Q5JPB2 1677 aa33.72■■■□□ 2.99
BLOC1S3-202ENST00000587722 AKAP4Q5JQC9 854 aa33.72■■■□□ 2.99
BLOC1S3-202ENST00000587722 MSL1Q68DK7 614 aa33.72■■■□□ 2.99
BLOC1S3-202ENST00000587722 SCN11AQ9UI33 1791 aa33.71■■■□□ 2.99
BLOC1S3-202ENST00000587722 PHF14O94880 888 aa33.71■■■□□ 2.99
BLOC1S3-202ENST00000587722 KLHL34Q8N239 644 aa33.71■■■□□ 2.99
BLOC1S3-202ENST00000587722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.7■■■□□ 2.99
BLOC1S3-202ENST00000587722 SSFA2P28290 1259 aa33.7■■■□□ 2.99
BLOC1S3-202ENST00000587722 RBM42Q9BTD8 480 aaKnown RBP33.7■■■□□ 2.99
BLOC1S3-202ENST00000587722 NFATC2IPQ8NCF5 419 aa33.69■■■□□ 2.98
BLOC1S3-202ENST00000587722 SLC4A9Q96Q91 983 aa33.69■■■□□ 2.98
BLOC1S3-202ENST00000587722 SMIM5Q71RC9 77 aa33.68■■■□□ 2.98
BLOC1S3-202ENST00000587722 GNPATO15228 680 aa33.67■■■□□ 2.98
BLOC1S3-202ENST00000587722 U2SURPO15042 1029 aaKnown RBP33.65■■■□□ 2.98
BLOC1S3-202ENST00000587722 MTHFSDQ2M296 383 aaKnown RBP33.64■■■□□ 2.98
BLOC1S3-202ENST00000587722 COL5A3P25940 1745 aaPredicted RBP33.64■■■□□ 2.98
BLOC1S3-202ENST00000587722 YY1P25490 414 aa33.63■■■□□ 2.97
BLOC1S3-202ENST00000587722 CFAP53Q96M91 514 aa33.62■■■□□ 2.97
BLOC1S3-202ENST00000587722 MRC1P22897 1456 aa33.62■■■□□ 2.97
BLOC1S3-202ENST00000587722 PTCD1O75127 700 aaKnown RBP33.61■■■□□ 2.97
BLOC1S3-202ENST00000587722 SLC52A2Q9HAB3 445 aa33.61■■■□□ 2.97
BLOC1S3-202ENST00000587722 LGR6Q9HBX8 967 aa33.61■■■□□ 2.97
BLOC1S3-202ENST00000587722 RNMTO43148 476 aaKnown RBP33.6■■■□□ 2.97
BLOC1S3-202ENST00000587722 UTRNP46939 3433 aa33.59■■■□□ 2.97
BLOC1S3-202ENST00000587722 CNTNAP4Q9C0A0 1308 aa33.59■■■□□ 2.97
BLOC1S3-202ENST00000587722 ADAMTS7Q9UKP4 1686 aa33.59■■■□□ 2.97
BLOC1S3-202ENST00000587722 VIRMAQ69YN4 1812 aaKnown RBP33.59■■■□□ 2.97
BLOC1S3-202ENST00000587722 NLGN2Q8NFZ4 835 aa33.59■■■□□ 2.97
BLOC1S3-202ENST00000587722 PPP2R1AP30153 589 aa33.58■■■□□ 2.97
BLOC1S3-202ENST00000587722 RC3H1Q5TC82 1133 aaKnown RBP33.58■■■□□ 2.97
BLOC1S3-202ENST00000587722 RTCBQ9Y3I0 505 aaKnown RBP33.58■■■□□ 2.97
BLOC1S3-202ENST00000587722 CICQ96RK0 1608 aaPredicted RBP33.55■■■□□ 2.96
BLOC1S3-202ENST00000587722 TJP1Q07157 1748 aa33.53■■■□□ 2.96
BLOC1S3-202ENST00000587722 GPR162Q16538 588 aa33.53■■■□□ 2.96
BLOC1S3-202ENST00000587722 TRAPPC3LQ5T215 181 aa33.53■■■□□ 2.96
BLOC1S3-202ENST00000587722 MYH14Q7Z406 1995 aaKnown RBP33.52■■■□□ 2.96
BLOC1S3-202ENST00000587722 ADRA2BP18089 450 aa33.52■■■□□ 2.96
BLOC1S3-202ENST00000587722 GAS2L2Q8NHY3 880 aa33.52■■■□□ 2.96
BLOC1S3-202ENST00000587722 CD2APQ9Y5K6 639 aa33.52■■■□□ 2.96
BLOC1S3-202ENST00000587722 RPS6KA4O75676 772 aa33.51■■■□□ 2.95
BLOC1S3-202ENST00000587722 NUDCQ9Y266 331 aa33.51■■■□□ 2.95
BLOC1S3-202ENST00000587722 GOLGB1Q14789 3259 aaKnown RBP33.49■■■□□ 2.95
BLOC1S3-202ENST00000587722 CRKLP46109 303 aaKnown RBP33.49■■■□□ 2.95
BLOC1S3-202ENST00000587722 RSPH6AQ9H0K4 717 aa33.49■■■□□ 2.95
BLOC1S3-202ENST00000587722 PRKAR2BP31323 418 aa33.48■■■□□ 2.95
BLOC1S3-202ENST00000587722 SLC39A6Q13433 755 aa33.48■■■□□ 2.95
BLOC1S3-202ENST00000587722 PELP1Q8IZL8 1130 aaKnown RBP33.48■■■□□ 2.95
BLOC1S3-202ENST00000587722 ARHGEF1Q92888 912 aaKnown RBP33.48■■■□□ 2.95
BLOC1S3-202ENST00000587722 GNAT3A8MTJ3 354 aa33.47■■■□□ 2.95
BLOC1S3-202ENST00000587722 KCPQ6ZWJ8 1503 aa33.47■■■□□ 2.95
BLOC1S3-202ENST00000587722 CHD4Q14839 1912 aa33.45■■■□□ 2.95
BLOC1S3-202ENST00000587722 PHACTR3Q96KR7 559 aa33.45■■■□□ 2.95
BLOC1S3-202ENST00000587722 C4AP0C0L4 1744 aa33.45■■■□□ 2.94
BLOC1S3-202ENST00000587722 U2AF1L5P0DN76 240 aaPredicted RBP33.44■■■□□ 2.94
BLOC1S3-202ENST00000587722 RFC4P35249 363 aa33.44■■■□□ 2.94
BLOC1S3-202ENST00000587722 U2AF1Q01081 240 aaKnown RBP eCLIP33.44■■■□□ 2.94
BLOC1S3-202ENST00000587722 MMP10P09238 476 aa33.43■■■□□ 2.94
BLOC1S3-202ENST00000587722 DNAJC10Q8IXB1 793 aa33.43■■■□□ 2.94
BLOC1S3-202ENST00000587722 NLGN1Q8N2Q7 840 aa33.43■■■□□ 2.94
BLOC1S3-202ENST00000587722 IL17REQ8NFR9 667 aa33.43■■■□□ 2.94
BLOC1S3-202ENST00000587722 TEFQ10587 303 aa33.41■■■□□ 2.94
BLOC1S3-202ENST00000587722 UBR2Q8IWV8 1755 aa33.41■■■□□ 2.94
BLOC1S3-202ENST00000587722 GYS1P13807 737 aa33.4■■■□□ 2.94
BLOC1S3-202ENST00000587722 INTS5Q6P9B9 1019 aaKnown RBP33.4■■■□□ 2.94
BLOC1S3-202ENST00000587722 YBX3P16989 372 aaKnown RBP eCLIP33.39■■■□□ 2.94
BLOC1S3-202ENST00000587722 CCDC87Q9NVE4 849 aa33.39■■■□□ 2.94
BLOC1S3-202ENST00000587722 FCHSD2O94868 740 aa33.38■■■□□ 2.93
BLOC1S3-202ENST00000587722 SIPA1L3O60292 1781 aaPredicted RBP33.38■■■□□ 2.93
BLOC1S3-202ENST00000587722 CEMIPQ8WUJ3 1361 aa33.37■■■□□ 2.93
BLOC1S3-202ENST00000587722 CYP19A1P11511 503 aaPredicted RBP33.37■■■□□ 2.93
BLOC1S3-202ENST00000587722 TTC5Q8N0Z6 440 aa33.37■■■□□ 2.93
BLOC1S3-202ENST00000587722 VSIG10Q8N0Z9 540 aa33.37■■■□□ 2.93
BLOC1S3-202ENST00000587722 GRIN3BO60391 1043 aa33.35■■■□□ 2.93
BLOC1S3-202ENST00000587722 USP42Q9H9J4 1324 aaKnown RBP33.34■■■□□ 2.93
BLOC1S3-202ENST00000587722 SRP68Q9UHB9 627 aaKnown RBP33.33■■■□□ 2.93
BLOC1S3-202ENST00000587722 SOS1Q07889 1333 aaPredicted RBP33.32■■■□□ 2.93
BLOC1S3-202ENST00000587722 ZNF790Q6PG37 636 aa33.32■■■□□ 2.92
BLOC1S3-202ENST00000587722 KIF13BQ9NQT8 1826 aa33.3■■■□□ 2.92
BLOC1S3-202ENST00000587722 ZNF496Q96IT1 587 aaPredicted RBP33.3■■■□□ 2.92
BLOC1S3-202ENST00000587722 C10orf71Q711Q0 1435 aa33.29■■■□□ 2.92
BLOC1S3-202ENST00000587722 ZNF784Q8NCA9 323 aaPredicted RBP33.29■■■□□ 2.92
BLOC1S3-202ENST00000587722 ZBTB1Q9Y2K1 713 aa33.29■■■□□ 2.92
BLOC1S3-202ENST00000587722 PARP3Q9Y6F1 533 aa33.29■■■□□ 2.92
BLOC1S3-202ENST00000587722 HEG1Q9ULI3 1381 aa33.28■■■□□ 2.92
BLOC1S3-202ENST00000587722 FKBP8Q14318 412 aa33.27■■■□□ 2.92
BLOC1S3-202ENST00000587722 RTF1Q92541 710 aaKnown RBP33.27■■■□□ 2.92
BLOC1S3-202ENST00000587722 COL15A1P39059 1388 aa33.26■■■□□ 2.92
BLOC1S3-202ENST00000587722 STARD3NLO95772 234 aa33.26■■■□□ 2.91
BLOC1S3-202ENST00000587722 PXDNLA1KZ92 1463 aa33.25■■■□□ 2.91
BLOC1S3-202ENST00000587722 ZPR1O75312 459 aa33.25■■■□□ 2.91
BLOC1S3-202ENST00000587722 BTBD11A6QL63 1104 aa33.24■■■□□ 2.91
BLOC1S3-202ENST00000587722 DDX10Q13206 875 aaKnown RBP33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms