RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 LNPKQ9C0E8 428 aa19.59■□□□□ 0.73
PPP6R1-204ENST00000587457 RGPD1P0DJD0 1748 aa19.59■□□□□ 0.73
PPP6R1-204ENST00000587457 PSME1Q06323 249 aa19.58■□□□□ 0.73
PPP6R1-204ENST00000587457 ZNF428Q96B54 188 aa19.58■□□□□ 0.73
PPP6R1-204ENST00000587457 ZKSCAN5Q9Y2L8 839 aa19.58■□□□□ 0.73
PPP6R1-204ENST00000587457 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
PPP6R1-204ENST00000587457 MRPL50Q8N5N7 158 aaKnown RBP19.58■□□□□ 0.72
PPP6R1-204ENST00000587457 DDX19BQ9UMR2 479 aa19.58■□□□□ 0.72
PPP6R1-204ENST00000587457 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 IGSF1Q8N6C5 1336 aa19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 MTHFSDQ2M296 383 aaKnown RBP19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 LTV1Q96GA3 475 aaPredicted RBP19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 ORAI2Q96SN7 254 aa19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 NUCB1Q02818 461 aa19.57■□□□□ 0.72
PPP6R1-204ENST00000587457 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
PPP6R1-204ENST00000587457 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
PPP6R1-204ENST00000587457 SASS6Q6UVJ0 657 aa19.56■□□□□ 0.72
PPP6R1-204ENST00000587457 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
PPP6R1-204ENST00000587457 KDRP35968 1356 aa19.55■□□□□ 0.72
PPP6R1-204ENST00000587457 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
PPP6R1-204ENST00000587457 LMBRD1Q9NUN5 540 aa19.54■□□□□ 0.72
PPP6R1-204ENST00000587457 MARF1Q9Y4F3 1742 aaKnown RBP19.53■□□□□ 0.72
PPP6R1-204ENST00000587457 CHL1O00533 1208 aa19.53■□□□□ 0.72
PPP6R1-204ENST00000587457 MCM5P33992 734 aa19.53■□□□□ 0.72
PPP6R1-204ENST00000587457 CHD1LQ86WJ1 897 aa19.53■□□□□ 0.72
PPP6R1-204ENST00000587457 CCDC94Q9BW85 323 aaPredicted RBP19.53■□□□□ 0.72
PPP6R1-204ENST00000587457 DMTNQ08495 405 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 BMP2KLQ5H9B9 411 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 ZBTB7CA1YPR0 619 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 KIF24Q5T7B8 1368 aa19.52■□□□□ 0.72
PPP6R1-204ENST00000587457 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
PPP6R1-204ENST00000587457 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
PPP6R1-204ENST00000587457 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
PPP6R1-204ENST00000587457 CRB1P82279 1406 aa19.5■□□□□ 0.71
PPP6R1-204ENST00000587457 TBC1D9Q6ZT07 1266 aa19.5■□□□□ 0.71
PPP6R1-204ENST00000587457 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
PPP6R1-204ENST00000587457 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
PPP6R1-204ENST00000587457 ARHGAP45Q92619 1136 aa19.49■□□□□ 0.71
PPP6R1-204ENST00000587457 AK9Q5TCS8 1911 aa19.49■□□□□ 0.71
PPP6R1-204ENST00000587457 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
PPP6R1-204ENST00000587457 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 NUCB2P80303 420 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 FGD1P98174 961 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 LMOD2Q6P5Q4 547 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 USP54Q70EL1 1684 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 IP6K1Q92551 441 aa19.48■□□□□ 0.71
PPP6R1-204ENST00000587457 PRPF40AO75400 957 aaKnown RBP19.47■□□□□ 0.71
PPP6R1-204ENST00000587457 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
PPP6R1-204ENST00000587457 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
PPP6R1-204ENST00000587457 PKP1Q13835 747 aa19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 GPT2Q8TD30 523 aa19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 CYP2E1P05181 493 aaPredicted RBP19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 KCNH5Q8NCM2 988 aa19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 C19orf44Q9H6X5 657 aa19.46■□□□□ 0.71
PPP6R1-204ENST00000587457 NFAT5O94916 1531 aa19.45■□□□□ 0.7
PPP6R1-204ENST00000587457 ABCC4O15439 1325 aa19.45■□□□□ 0.7
PPP6R1-204ENST00000587457 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 LRSAM1Q6UWE0 723 aa19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 JARID2Q92833 1246 aaPredicted RBP19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 HSPA2P54652 639 aa19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
PPP6R1-204ENST00000587457 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 GCP02774 474 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 SYCE3A1L190 88 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 KRT28Q7Z3Y7 464 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 MYRIPQ8NFW9 859 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
PPP6R1-204ENST00000587457 TMEM63CQ9P1W3 806 aa19.42■□□□□ 0.7
PPP6R1-204ENST00000587457 TMEM94Q12767 1356 aa19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 DNTTIP2Q5QJE6 756 aaKnown RBP19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 RNF214Q8ND24 703 aa19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 TSC1Q92574 1164 aa19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 CBX1P83916 185 aa19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
PPP6R1-204ENST00000587457 PTMAP06454 111 aaKnown RBP19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 KIAA2012Q0VF49 1180 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 RABEP1Q15276 862 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 MSH6P52701 1360 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 ZNF710Q8N1W2 664 aa19.4■□□□□ 0.7
PPP6R1-204ENST00000587457 ATF3P18847 181 aa19.39■□□□□ 0.69
PPP6R1-204ENST00000587457 ARHGEF25Q86VW2 580 aa19.39■□□□□ 0.69
PPP6R1-204ENST00000587457 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
PPP6R1-204ENST00000587457 LTN1O94822 1766 aa19.39■□□□□ 0.69
PPP6R1-204ENST00000587457 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
PPP6R1-204ENST00000587457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.39■□□□□ 0.695e-6■■■■□ 19.3
PPP6R1-204ENST00000587457 CDC45O75419 566 aa19.38■□□□□ 0.69
PPP6R1-204ENST00000587457 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
PPP6R1-204ENST00000587457 CHAMP1Q96JM3 812 aa19.38■□□□□ 0.69
PPP6R1-204ENST00000587457 GCC1Q96CN9 775 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms