RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
UBE2O-204ENST00000587127 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 CUL4AQ13619 759 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 ATP7BP35670 1465 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 HMMRO75330 724 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 USP25Q9UHP3 1055 aa13.2□□□□□ -0.3
UBE2O-204ENST00000587127 CSPP1Q1MSJ5 1256 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
UBE2O-204ENST00000587127 EDC4Q6P2E9 1401 aaKnown RBP13.19□□□□□ -0.3
UBE2O-204ENST00000587127 CHMLP26374 656 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 PTPRCP08575 1304 aa13.19□□□□□ -0.3
UBE2O-204ENST00000587127 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
UBE2O-204ENST00000587127 DNTTIP2Q5QJE6 756 aaKnown RBP13.19□□□□□ -0.3
UBE2O-204ENST00000587127 MCM5P33992 734 aa13.18□□□□□ -0.3
UBE2O-204ENST00000587127 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
UBE2O-204ENST00000587127 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
UBE2O-204ENST00000587127 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 MX1P20591 662 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
UBE2O-204ENST00000587127 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 GNAI2P04899 355 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
UBE2O-204ENST00000587127 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
UBE2O-204ENST00000587127 MCCP23508 829 aa13.15□□□□□ -0.3
UBE2O-204ENST00000587127 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
UBE2O-204ENST00000587127 MCM2P49736 904 aa13.15□□□□□ -0.3
UBE2O-204ENST00000587127 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
UBE2O-204ENST00000587127 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
UBE2O-204ENST00000587127 KIAA0232Q92628 1395 aa13.15□□□□□ -0.31
UBE2O-204ENST00000587127 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
UBE2O-204ENST00000587127 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
UBE2O-204ENST00000587127 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
UBE2O-204ENST00000587127 ADCY5O95622 1261 aa13.14□□□□□ -0.31
UBE2O-204ENST00000587127 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
UBE2O-204ENST00000587127 TCHHQ07283 1943 aa13.14□□□□□ -0.31
UBE2O-204ENST00000587127 METP08581 1390 aa13.14□□□□□ -0.31
UBE2O-204ENST00000587127 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
UBE2O-204ENST00000587127 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
UBE2O-204ENST00000587127 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
UBE2O-204ENST00000587127 CRB1P82279 1406 aa13.13□□□□□ -0.31
UBE2O-204ENST00000587127 CPA1P15085 419 aa13.13□□□□□ -0.31
UBE2O-204ENST00000587127 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
UBE2O-204ENST00000587127 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
UBE2O-204ENST00000587127 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
UBE2O-204ENST00000587127 FIBPO43427 364 aa13.12□□□□□ -0.31
UBE2O-204ENST00000587127 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE2O-204ENST00000587127 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
UBE2O-204ENST00000587127 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
UBE2O-204ENST00000587127 ANAPC15P60006 121 aa13.12□□□□□ -0.31
UBE2O-204ENST00000587127 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
UBE2O-204ENST00000587127 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
UBE2O-204ENST00000587127 MLECQ14165 292 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 AP5Z1O43299 807 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 FLIIQ13045 1269 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 PIBF1Q8WXW3 757 aa13.11□□□□□ -0.31
UBE2O-204ENST00000587127 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
UBE2O-204ENST00000587127 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
UBE2O-204ENST00000587127 PHF14O94880 888 aa13.1□□□□□ -0.31
UBE2O-204ENST00000587127 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
UBE2O-204ENST00000587127 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
UBE2O-204ENST00000587127 LARGE1O95461 756 aa13.1□□□□□ -0.31
UBE2O-204ENST00000587127 HSPA4P34932 840 aa13.1□□□□□ -0.31
UBE2O-204ENST00000587127 TTC21BQ7Z4L5 1316 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 SYT1P21579 422 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 AK2P54819 239 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
UBE2O-204ENST00000587127 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
UBE2O-204ENST00000587127 SPC24Q8NBT2 197 aa13.08□□□□□ -0.32
UBE2O-204ENST00000587127 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
UBE2O-204ENST00000587127 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
UBE2O-204ENST00000587127 GNAI3P08754 354 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
UBE2O-204ENST00000587127 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 DLC1Q96QB1 1528 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 ACEP12821 1306 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 STX6O43752 255 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 CBX1P83916 185 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms