RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
TMED1-202ENST00000586835 IFNL2Q8IZJ0 200 aa18.18■□□□□ 0.5
TMED1-202ENST00000586835 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
TMED1-202ENST00000586835 PHKG2P15735 406 aa18.17■□□□□ 0.5
TMED1-202ENST00000586835 NEUROD2Q15784 382 aa18.17■□□□□ 0.5
TMED1-202ENST00000586835 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
TMED1-202ENST00000586835 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
TMED1-202ENST00000586835 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
TMED1-202ENST00000586835 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
TMED1-202ENST00000586835 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
TMED1-202ENST00000586835 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
TMED1-202ENST00000586835 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
TMED1-202ENST00000586835 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
TMED1-202ENST00000586835 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
TMED1-202ENST00000586835 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
TMED1-202ENST00000586835 RNF123Q5XPI4 1314 aa18.13■□□□□ 0.49
TMED1-202ENST00000586835 ITGB4P16144 1822 aa18.12■□□□□ 0.49
TMED1-202ENST00000586835 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
TMED1-202ENST00000586835 GNAI1P63096 354 aa18.12■□□□□ 0.49
TMED1-202ENST00000586835 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
TMED1-202ENST00000586835 LRRC4BQ9NT99 713 aa18.12■□□□□ 0.49
TMED1-202ENST00000586835 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
TMED1-202ENST00000586835 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 PIGBQ92521 554 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 RTF1Q92541 710 aaKnown RBP18.11■□□□□ 0.49
TMED1-202ENST00000586835 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
TMED1-202ENST00000586835 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 LY75O60449 1722 aa18.11■□□□□ 0.49
TMED1-202ENST00000586835 SLC15A2Q16348 729 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 STK32BQ9NY57 414 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
TMED1-202ENST00000586835 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
TMED1-202ENST00000586835 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
TMED1-202ENST00000586835 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
TMED1-202ENST00000586835 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.49
TMED1-202ENST00000586835 ERVV-2B6SEH9 535 aa18.08■□□□□ 0.48
TMED1-202ENST00000586835 C1orf141Q5JVX7 400 aa18.08■□□□□ 0.48
TMED1-202ENST00000586835 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
TMED1-202ENST00000586835 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
TMED1-202ENST00000586835 KCNQ4P56696 695 aa18.07■□□□□ 0.48
TMED1-202ENST00000586835 CCNL1Q9UK58 526 aaPredicted RBP18.07■□□□□ 0.48
TMED1-202ENST00000586835 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
TMED1-202ENST00000586835 LRP5O75197 1615 aa18.06■□□□□ 0.48
TMED1-202ENST00000586835 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
TMED1-202ENST00000586835 CHL1O00533 1208 aa18.06■□□□□ 0.48
TMED1-202ENST00000586835 ERICH6BQ5W0A0 696 aa18.06■□□□□ 0.48
TMED1-202ENST00000586835 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
TMED1-202ENST00000586835 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
TMED1-202ENST00000586835 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
TMED1-202ENST00000586835 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
TMED1-202ENST00000586835 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
TMED1-202ENST00000586835 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
TMED1-202ENST00000586835 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
TMED1-202ENST00000586835 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
TMED1-202ENST00000586835 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
TMED1-202ENST00000586835 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
TMED1-202ENST00000586835 NEFLP07196 543 aa18.02■□□□□ 0.48
TMED1-202ENST00000586835 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
TMED1-202ENST00000586835 CABP4P57796 275 aa18.02■□□□□ 0.48
TMED1-202ENST00000586835 IL17REQ8NFR9 667 aa18.02■□□□□ 0.48
TMED1-202ENST00000586835 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
TMED1-202ENST00000586835 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
TMED1-202ENST00000586835 BRPF1P55201 1214 aaPredicted RBP18■□□□□ 0.47
TMED1-202ENST00000586835 SIK1P57059 783 aa18■□□□□ 0.47
TMED1-202ENST00000586835 MCM10Q7L590 875 aa18■□□□□ 0.47
TMED1-202ENST00000586835 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
TMED1-202ENST00000586835 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
TMED1-202ENST00000586835 LGR6Q9HBX8 967 aa18■□□□□ 0.47
TMED1-202ENST00000586835 SPON1Q9HCB6 807 aa18■□□□□ 0.47
TMED1-202ENST00000586835 MBIPQ9NS73 344 aa18■□□□□ 0.47
TMED1-202ENST00000586835 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
TMED1-202ENST00000586835 RNMTO43148 476 aaKnown RBP17.99■□□□□ 0.47
TMED1-202ENST00000586835 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
TMED1-202ENST00000586835 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
TMED1-202ENST00000586835 TFCP2L1Q9NZI6 479 aa17.99■□□□□ 0.47
TMED1-202ENST00000586835 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
TMED1-202ENST00000586835 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
TMED1-202ENST00000586835 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
TMED1-202ENST00000586835 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
TMED1-202ENST00000586835 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
TMED1-202ENST00000586835 C5P01031 1676 aa17.98■□□□□ 0.47
TMED1-202ENST00000586835 MRC1P22897 1456 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 ZBTB7AO95365 584 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
TMED1-202ENST00000586835 TSR2Q969E8 191 aaKnown RBP17.97■□□□□ 0.47
TMED1-202ENST00000586835 SLC52A2Q9HAB3 445 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 GTF3C3Q9Y5Q9 886 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 PNPLA7Q6ZV29 1317 aa17.97■□□□□ 0.47
TMED1-202ENST00000586835 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
TMED1-202ENST00000586835 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
TMED1-202ENST00000586835 RARSP54136 660 aaKnown RBP17.96■□□□□ 0.47
TMED1-202ENST00000586835 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
TMED1-202ENST00000586835 TEFQ10587 303 aa17.95■□□□□ 0.46
TMED1-202ENST00000586835 ITPK1Q13572 414 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms