RNA–Protein interactions for RNA: ENST00000586592.5

ATP5A1-205, Transcript of ATP synthase subunit alpha, mitochondrial, human

TSL 2

Gene ATP5A1, Length 2,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5A1-205	ENST00000586592	CEMIP	Q8WUJ3	1361 aa		28.91	■■■□□ 2.22
ATP5A1-205	ENST00000586592	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.91	■■■□□ 2.22
ATP5A1-205	ENST00000586592	RAB3GAP1	Q15042	981 aa		28.91	■■■□□ 2.22
ATP5A1-205	ENST00000586592	TRAK2	O60296	914 aa		28.9	■■■□□ 2.22
ATP5A1-205	ENST00000586592	KCNH5	Q8NCM2	988 aa		28.9	■■■□□ 2.22
ATP5A1-205	ENST00000586592	PDE1A	P54750	535 aa		28.89	■■■□□ 2.21
ATP5A1-205	ENST00000586592	ATP8B2	P98198	1209 aa		28.89	■■■□□ 2.21
ATP5A1-205	ENST00000586592	MED1	Q15648	1581 aa	Predicted RBP	28.88	■■■□□ 2.21
ATP5A1-205	ENST00000586592	REC8	O95072	547 aa		28.88	■■■□□ 2.21
ATP5A1-205	ENST00000586592	TNPO1	Q92973	898 aa	Known RBP	28.88	■■■□□ 2.21
ATP5A1-205	ENST00000586592	GBP4	Q96PP9	640 aa		28.88	■■■□□ 2.21
ATP5A1-205	ENST00000586592	CHMP4A	Q9BY43	222 aa		28.88	■■■□□ 2.21
ATP5A1-205	ENST00000586592	TRH	P20396	242 aa	Predicted RBP	28.87	■■■□□ 2.21
ATP5A1-205	ENST00000586592	PSME1	Q06323	249 aa		28.87	■■■□□ 2.21
ATP5A1-205	ENST00000586592	USHBP1	Q8N6Y0	703 aa		28.87	■■■□□ 2.21
ATP5A1-205	ENST00000586592	LRRCC1	Q9C099	1032 aa		28.86	■■■□□ 2.21
ATP5A1-205	ENST00000586592	PTMS	P20962	102 aa		28.86	■■■□□ 2.21
ATP5A1-205	ENST00000586592	NECTIN2	Q92692	538 aa		28.86	■■■□□ 2.21
ATP5A1-205	ENST00000586592	HDGFL1	Q5TGJ6	251 aa		28.85	■■■□□ 2.21
ATP5A1-205	ENST00000586592	HOXB7	P09629	217 aa		28.85	■■■□□ 2.21
ATP5A1-205	ENST00000586592	SALL3	Q9BXA9	1300 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	ESCO1	Q5FWF5	840 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	NBPF6	Q5VWK0	638 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	NBPF4	Q96M43	638 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	EXOC6B	Q9Y2D4	811 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	ERC2	O15083	957 aa		28.84	■■■□□ 2.21
ATP5A1-205	ENST00000586592	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.83	■■■□□ 2.21
ATP5A1-205	ENST00000586592	KDM3B	Q7LBC6	1761 aa		28.82	■■■□□ 2.2
ATP5A1-205	ENST00000586592	LMO7	Q8WWI1	1683 aa		28.82	■■■□□ 2.2
ATP5A1-205	ENST00000586592	PNMA6E	A0A0J9YXQ4	647 aa		28.81	■■■□□ 2.2
ATP5A1-205	ENST00000586592	FSD2	A1L4K1	749 aa		28.81	■■■□□ 2.2
ATP5A1-205	ENST00000586592	USP44	Q9H0E7	712 aa		28.81	■■■□□ 2.2
ATP5A1-205	ENST00000586592	GOLGA6L3	A6NEY3	463 aa		28.81	■■■□□ 2.2
ATP5A1-205	ENST00000586592	TUBGCP6	Q96RT7	1819 aa		28.8	■■■□□ 2.2
ATP5A1-205	ENST00000586592	LRRFIP2	Q9Y608	721 aa	Known RBP	28.8	■■■□□ 2.2
ATP5A1-205	ENST00000586592	UBTFL1	P0CB47	393 aa	Predicted RBP	28.79	■■■□□ 2.2
ATP5A1-205	ENST00000586592	EIF4A1	P60842	406 aa	Known RBP	28.79	■■■□□ 2.2
ATP5A1-205	ENST00000586592	SRCIN1	Q9C0H9	1055 aa		28.79	■■■□□ 2.2
ATP5A1-205	ENST00000586592	MX1	P20591	662 aa		28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	AKAP4	Q5JQC9	854 aa		28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	SKOR2	Q2VWA4	1001 aa	Predicted RBP	28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	CLEC17A	Q6ZS10	378 aa		28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	FOXD4L1	Q9NU39	408 aa		28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	SETD1B	Q9UPS6	1966 aa	Known RBP	28.78	■■■□□ 2.2
ATP5A1-205	ENST00000586592	ST18	O60284	1047 aa		28.77	■■■□□ 2.2
ATP5A1-205	ENST00000586592	STAP2	Q9UGK3	403 aa		28.77	■■■□□ 2.2
ATP5A1-205	ENST00000586592	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.77	■■■□□ 2.2
ATP5A1-205	ENST00000586592	RBM33	Q96EV2	1170 aa	Known RBP	28.77	■■■□□ 2.2
ATP5A1-205	ENST00000586592	GZF1	Q9H116	711 aa	Predicted RBP	28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	PHAX	Q9H814	394 aa	Known RBP	28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	LGR6	Q9HBX8	967 aa		28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	SLIT3	O75094	1523 aa		28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	RGPD2	P0DJD1	1756 aa		28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	NCAPD2	Q15021	1401 aa		28.76	■■■□□ 2.19
ATP5A1-205	ENST00000586592	AMOT	Q4VCS5	1084 aa		28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	SSH3	Q8TE77	659 aa		28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	AOX1	Q06278	1338 aa		28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ADAMTSL3	P82987	1691 aa		28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ISY1	Q9ULR0	285 aa	Known RBP	28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	NPHP4	O75161	1426 aa	Predicted RBP	28.75	■■■□□ 2.19
ATP5A1-205	ENST00000586592	RTN4	Q9NQC3	1192 aa	Known RBP	28.74	■■■□□ 2.19
ATP5A1-205	ENST00000586592	OVOS2	A0A0G2JMS6	1433 aa		28.73	■■■□□ 2.19
ATP5A1-205	ENST00000586592	TEF	Q10587	303 aa		28.73	■■■□□ 2.19
ATP5A1-205	ENST00000586592	RAB11FIP3	O75154	756 aa		28.73	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.73	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ARHGEF25	Q86VW2	580 aa		28.73	■■■□□ 2.19
ATP5A1-205	ENST00000586592	GC	P02774	474 aa		28.72	■■■□□ 2.19
ATP5A1-205	ENST00000586592	NUCB2	P80303	420 aa		28.71	■■■□□ 2.19
ATP5A1-205	ENST00000586592	CWC22	Q9HCG8	908 aa	Known RBP	28.71	■■■□□ 2.19
ATP5A1-205	ENST00000586592	EIF2S2	P20042	333 aa	Known RBP	28.71	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ZBTB7C	A1YPR0	619 aa		28.7	■■■□□ 2.19
ATP5A1-205	ENST00000586592	POLA2	Q14181	598 aa		28.7	■■■□□ 2.19
ATP5A1-205	ENST00000586592	ESYT1	Q9BSJ8	1104 aa		28.7	■■■□□ 2.19
ATP5A1-205	ENST00000586592	BTBD11	A6QL63	1104 aa		28.7	■■■□□ 2.18
ATP5A1-205	ENST00000586592	GOLGA6L22	H0YM25	854 aa		28.7	■■■□□ 2.18
ATP5A1-205	ENST00000586592	LRRC59	Q96AG4	307 aa	Known RBP	28.7	■■■□□ 2.18
ATP5A1-205	ENST00000586592	XRCC6	P12956	609 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
ATP5A1-205	ENST00000586592	SSFA2	P28290	1259 aa		28.69	■■■□□ 2.18
ATP5A1-205	ENST00000586592	CHPF2	Q9P2E5	772 aa		28.69	■■■□□ 2.18
ATP5A1-205	ENST00000586592	DNAAF4	Q8WXU2	420 aa		28.68	■■■□□ 2.18
ATP5A1-205	ENST00000586592	CAMTA1	Q9Y6Y1	1673 aa		28.68	■■■□□ 2.18
ATP5A1-205	ENST00000586592	MRE11	P49959	708 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	C1orf141	Q5JVX7	400 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	BEND3	Q5T5X7	828 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	TSHZ3	Q63HK5	1081 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	PPP1R42	Q7Z4L9	355 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	ORAI2	Q96SN7	254 aa		28.67	■■■□□ 2.18
ATP5A1-205	ENST00000586592	RNMT	O43148	476 aa	Known RBP	28.66	■■■□□ 2.18
ATP5A1-205	ENST00000586592	MCC	P23508	829 aa		28.66	■■■□□ 2.18
ATP5A1-205	ENST00000586592	CHML	P26374	656 aa		28.66	■■■□□ 2.18
ATP5A1-205	ENST00000586592	FAM43A	Q8N2R8	423 aa		28.66	■■■□□ 2.18
ATP5A1-205	ENST00000586592	TRIM6-TRIM34	B2RNG4	842 aa		28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	EPB41L2	O43491	1005 aa	Known RBP	28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	KCNQ3	O43525	872 aa		28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	ANAPC15	P60006	121 aa		28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	MPRIP	Q6WCQ1	1025 aa		28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	LMTK3	Q96Q04	1460 aa		28.65	■■■□□ 2.18
ATP5A1-205	ENST00000586592	PI4KAP2	A4QPH2	592 aa		28.64	■■■□□ 2.18
ATP5A1-205	ENST00000586592	CYP2E1	P05181	493 aa	Predicted RBP	28.64	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms