RNA–Protein interactions for RNA: ENST00000586557.5

PKN1-207, Transcript of protein kinase N1, humanhuman

TSL 5

Gene PKN1, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-207ENST00000586557 RTF1Q92541 710 aaKnown RBP29.36■■■□□ 2.29
PKN1-207ENST00000586557 PALLDQ8WX93 1383 aa29.36■■■□□ 2.29
PKN1-207ENST00000586557 LY75O60449 1722 aa29.35■■■□□ 2.29
PKN1-207ENST00000586557 SMARCC1Q92922 1105 aaPredicted RBP29.35■■■□□ 2.29
PKN1-207ENST00000586557 ASAP1Q9ULH1 1129 aa29.35■■■□□ 2.29
PKN1-207ENST00000586557 MCM10Q7L590 875 aa29.34■■■□□ 2.29
PKN1-207ENST00000586557 ATG3Q9NT62 314 aa29.34■■■□□ 2.29
PKN1-207ENST00000586557 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
PKN1-207ENST00000586557 DCTN1Q14203 1278 aa29.33■■■□□ 2.29
PKN1-207ENST00000586557 MIER1Q8N108 512 aa29.33■■■□□ 2.29
PKN1-207ENST00000586557 RIPK4P57078 832 aa29.32■■■□□ 2.28
PKN1-207ENST00000586557 RRP7AQ9Y3A4 280 aaKnown RBP29.32■■■□□ 2.28
PKN1-207ENST00000586557 TEFQ10587 303 aa29.31■■■□□ 2.28
PKN1-207ENST00000586557 FAM9BQ8IZU0 186 aa29.3■■■□□ 2.28
PKN1-207ENST00000586557 SIPA1L3O60292 1781 aaPredicted RBP29.29■■■□□ 2.28
PKN1-207ENST00000586557 APAF1O14727 1248 aa29.29■■■□□ 2.28
PKN1-207ENST00000586557 SLC27A3Q5K4L6 730 aa29.29■■■□□ 2.28
PKN1-207ENST00000586557 PAPPAQ13219 1627 aa29.28■■■□□ 2.28
PKN1-207ENST00000586557 NEUROD2Q15784 382 aa29.28■■■□□ 2.28
PKN1-207ENST00000586557 LRRC4BQ9NT99 713 aa29.28■■■□□ 2.28
PKN1-207ENST00000586557 CCNL1Q9UK58 526 aaPredicted RBP29.28■■■□□ 2.28
PKN1-207ENST00000586557 LMOD3Q0VAK6 560 aa29.27■■■□□ 2.28
PKN1-207ENST00000586557 KCNQ4P56696 695 aa29.26■■■□□ 2.27
PKN1-207ENST00000586557 THUMPD2Q9BTF0 503 aaKnown RBP29.26■■■□□ 2.27
PKN1-207ENST00000586557 LOC102724428A0A0B4J2F2 783 aa29.25■■■□□ 2.27
PKN1-207ENST00000586557 SIK1P57059 783 aa29.25■■■□□ 2.27
PKN1-207ENST00000586557 SLC39A6Q13433 755 aa29.24■■■□□ 2.27
PKN1-207ENST00000586557 TRIM35Q9UPQ4 493 aa29.24■■■□□ 2.27
PKN1-207ENST00000586557 RBM42Q9BTD8 480 aaKnown RBP29.21■■■□□ 2.27
PKN1-207ENST00000586557 ANO8Q9HCE9 1232 aaPredicted RBP29.21■■■□□ 2.27
PKN1-207ENST00000586557 KCPQ6ZWJ8 1503 aa29.2■■■□□ 2.27
PKN1-207ENST00000586557 BTBD11A6QL63 1104 aa29.2■■■□□ 2.26
PKN1-207ENST00000586557 PTCD1O75127 700 aaKnown RBP29.2■■■□□ 2.26
PKN1-207ENST00000586557 SLC4A9Q96Q91 983 aa29.2■■■□□ 2.26
PKN1-207ENST00000586557 ZNF831Q5JPB2 1677 aa29.19■■■□□ 2.26
PKN1-207ENST00000586557 TAF7Q15545 349 aaPredicted RBP29.19■■■□□ 2.26
PKN1-207ENST00000586557 NBPF14Q5TI25 921 aa29.19■■■□□ 2.26
PKN1-207ENST00000586557 UBR2Q8IWV8 1755 aa29.18■■■□□ 2.26
PKN1-207ENST00000586557 ZNF790Q6PG37 636 aa29.18■■■□□ 2.26
PKN1-207ENST00000586557 C5P01031 1676 aa29.18■■■□□ 2.26
PKN1-207ENST00000586557 ATP6V1AP38606 617 aa29.17■■■□□ 2.26
PKN1-207ENST00000586557 TTC5Q8N0Z6 440 aa29.17■■■□□ 2.26
PKN1-207ENST00000586557 SENP3-EIF4A1A0A087X0R7 540 aa29.16■■■□□ 2.26
PKN1-207ENST00000586557 ITPK1Q13572 414 aa29.16■■■□□ 2.26
PKN1-207ENST00000586557 TAF1LQ8IZX4 1826 aa29.15■■■□□ 2.26
PKN1-207ENST00000586557 KCNQ3O43525 872 aa29.15■■■□□ 2.26
PKN1-207ENST00000586557 ZNF827Q17R98 1081 aa29.15■■■□□ 2.26
PKN1-207ENST00000586557 STK32BQ9NY57 414 aa29.15■■■□□ 2.26
PKN1-207ENST00000586557 CICQ96RK0 1608 aaPredicted RBP29.14■■■□□ 2.26
PKN1-207ENST00000586557 HMGB2P26583 209 aaKnown RBP29.13■■■□□ 2.25
PKN1-207ENST00000586557 LINC00116Q8NCU8 138 aa29.13■■■□□ 2.25
PKN1-207ENST00000586557 AKT1S1Q96B36 256 aa29.13■■■□□ 2.25
PKN1-207ENST00000586557 ZNF496Q96IT1 587 aaPredicted RBP29.13■■■□□ 2.25
PKN1-207ENST00000586557 MIS18AQ9NYP9 233 aa29.13■■■□□ 2.25
PKN1-207ENST00000586557 TJP1Q07157 1748 aa29.12■■■□□ 2.25
PKN1-207ENST00000586557 R3HDM1Q15032 1099 aaKnown RBP29.12■■■□□ 2.25
PKN1-207ENST00000586557 SLC15A2Q16348 729 aa29.12■■■□□ 2.25
PKN1-207ENST00000586557 NCBP3Q53F19 620 aaKnown RBP29.12■■■□□ 2.25
PKN1-207ENST00000586557 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
PKN1-207ENST00000586557 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
PKN1-207ENST00000586557 CCDC27Q2M243 656 aa29.11■■■□□ 2.25
PKN1-207ENST00000586557 PSDA5PKW4 1024 aaPredicted RBP29.1■■■□□ 2.25
PKN1-207ENST00000586557 VSIG10Q8N0Z9 540 aa29.1■■■□□ 2.25
PKN1-207ENST00000586557 FMNL2Q96PY5 1086 aa29.1■■■□□ 2.25
PKN1-207ENST00000586557 HEG1Q9ULI3 1381 aa29.1■■■□□ 2.25
PKN1-207ENST00000586557 COL5A3P25940 1745 aaPredicted RBP29.09■■■□□ 2.25
PKN1-207ENST00000586557 DNAJC10Q8IXB1 793 aa29.08■■■□□ 2.25
PKN1-207ENST00000586557 BABAM1Q9NWV8 329 aa29.08■■■□□ 2.25
PKN1-207ENST00000586557 TSPYL4Q9UJ04 414 aa29.07■■■□□ 2.24
PKN1-207ENST00000586557 CALD1Q05682 793 aaKnown RBP29.06■■■□□ 2.24
PKN1-207ENST00000586557 WWC1Q8IX03 1113 aa29.06■■■□□ 2.24
PKN1-207ENST00000586557 CNTNAP4Q9C0A0 1308 aa29.05■■■□□ 2.24
PKN1-207ENST00000586557 CHL1O00533 1208 aa29.05■■■□□ 2.24
PKN1-207ENST00000586557 AK7Q96M32 723 aa29.05■■■□□ 2.24
PKN1-207ENST00000586557 SALL2Q9Y467 1007 aaPredicted RBP29.05■■■□□ 2.24
PKN1-207ENST00000586557 NGEFQ8N5V2 710 aa29.04■■■□□ 2.24
PKN1-207ENST00000586557 TFCP2L1Q9NZI6 479 aa29.04■■■□□ 2.24
PKN1-207ENST00000586557 LAS1LQ9Y4W2 734 aaKnown RBP29.04■■■□□ 2.24
PKN1-207ENST00000586557 EIF4A1P60842 406 aaKnown RBP29.03■■■□□ 2.24
PKN1-207ENST00000586557 CFAP44Q96MT7 982 aa29.03■■■□□ 2.24
PKN1-207ENST00000586557 TUBGCP6Q96RT7 1819 aa29.03■■■□□ 2.24
PKN1-207ENST00000586557 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
PKN1-207ENST00000586557 ZNF853P0CG23 659 aa29.01■■■□□ 2.23
PKN1-207ENST00000586557 CYP19A1P11511 503 aaPredicted RBP29.01■■■□□ 2.23
PKN1-207ENST00000586557 CRKLP46109 303 aaKnown RBP29.01■■■□□ 2.23
PKN1-207ENST00000586557 RC3H1Q5TC82 1133 aaKnown RBP29.01■■■□□ 2.23
PKN1-207ENST00000586557 IFT57Q9NWB7 429 aa29.01■■■□□ 2.23
PKN1-207ENST00000586557 PNPLA7Q6ZV29 1317 aa29■■■□□ 2.23
PKN1-207ENST00000586557 SNRPA1P09661 255 aaKnown RBP29■■■□□ 2.23
PKN1-207ENST00000586557 TEX13AQ9BXU3 409 aaPredicted RBP29■■■□□ 2.23
PKN1-207ENST00000586557 GNPATO15228 680 aa28.99■■■□□ 2.23
PKN1-207ENST00000586557 GNAI1P63096 354 aa28.99■■■□□ 2.23
PKN1-207ENST00000586557 AMIGO3Q86WK7 504 aa28.99■■■□□ 2.23
PKN1-207ENST00000586557 UBR3Q6ZT12 1888 aa28.99■■■□□ 2.23
PKN1-207ENST00000586557 CASZ1Q86V15 1759 aa28.98■■■□□ 2.23
PKN1-207ENST00000586557 PRAMEF22A3QJZ6 481 aa28.98■■■□□ 2.23
PKN1-207ENST00000586557 INTS5Q6P9B9 1019 aaKnown RBP28.98■■■□□ 2.23
PKN1-207ENST00000586557 PDGFDQ9GZP0 370 aaPredicted RBP28.98■■■□□ 2.23
PKN1-207ENST00000586557 MBIPQ9NS73 344 aa28.98■■■□□ 2.23
PKN1-207ENST00000586557 MYH14Q7Z406 1995 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms