RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 PKD1L3Q7Z443 1732 aa17.28■□□□□ 0.36
DNMT1-205ENST00000585920 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
DNMT1-205ENST00000585920 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
DNMT1-205ENST00000585920 ERVV-2B6SEH9 535 aa17.27■□□□□ 0.36
DNMT1-205ENST00000585920 SOCS7O14512 581 aa17.27■□□□□ 0.36
DNMT1-205ENST00000585920 APBA3O96018 575 aa17.27■□□□□ 0.36
DNMT1-205ENST00000585920 CABP4P57796 275 aa17.26■□□□□ 0.35
DNMT1-205ENST00000585920 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
DNMT1-205ENST00000585920 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
DNMT1-205ENST00000585920 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
DNMT1-205ENST00000585920 HTATSF1O43719 755 aaKnown RBP17.25■□□□□ 0.35
DNMT1-205ENST00000585920 RIPK4P57078 832 aa17.25■□□□□ 0.35
DNMT1-205ENST00000585920 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
DNMT1-205ENST00000585920 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
DNMT1-205ENST00000585920 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
DNMT1-205ENST00000585920 APAF1O14727 1248 aa17.24■□□□□ 0.35
DNMT1-205ENST00000585920 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
DNMT1-205ENST00000585920 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
DNMT1-205ENST00000585920 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
DNMT1-205ENST00000585920 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
DNMT1-205ENST00000585920 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
DNMT1-205ENST00000585920 BAG6P46379 1132 aa17.23■□□□□ 0.35
DNMT1-205ENST00000585920 PIGBQ92521 554 aa17.23■□□□□ 0.35
DNMT1-205ENST00000585920 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
DNMT1-205ENST00000585920 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-205ENST00000585920 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
DNMT1-205ENST00000585920 TEFQ10587 303 aa17.21■□□□□ 0.35
DNMT1-205ENST00000585920 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
DNMT1-205ENST00000585920 MCM10Q7L590 875 aa17.21■□□□□ 0.35
DNMT1-205ENST00000585920 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
DNMT1-205ENST00000585920 PLSCR1O15162 318 aa17.2■□□□□ 0.34
DNMT1-205ENST00000585920 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-205ENST00000585920 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
DNMT1-205ENST00000585920 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
DNMT1-205ENST00000585920 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-205ENST00000585920 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
DNMT1-205ENST00000585920 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
DNMT1-205ENST00000585920 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-205ENST00000585920 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
DNMT1-205ENST00000585920 CAMKK2Q96RR4 588 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
DNMT1-205ENST00000585920 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
DNMT1-205ENST00000585920 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
DNMT1-205ENST00000585920 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
DNMT1-205ENST00000585920 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-205ENST00000585920 TXNRD1Q16881 649 aa17.14■□□□□ 0.33
DNMT1-205ENST00000585920 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
DNMT1-205ENST00000585920 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
DNMT1-205ENST00000585920 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
DNMT1-205ENST00000585920 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
DNMT1-205ENST00000585920 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
DNMT1-205ENST00000585920 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
DNMT1-205ENST00000585920 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
DNMT1-205ENST00000585920 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
DNMT1-205ENST00000585920 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
DNMT1-205ENST00000585920 EP400Q96L91 3159 aa17.12■□□□□ 0.33
DNMT1-205ENST00000585920 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
DNMT1-205ENST00000585920 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
DNMT1-205ENST00000585920 CCNL1Q9UK58 526 aaPredicted RBP17.11■□□□□ 0.33
DNMT1-205ENST00000585920 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 SIK1P57059 783 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
DNMT1-205ENST00000585920 MRC1P22897 1456 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
DNMT1-205ENST00000585920 BTAF1O14981 1849 aa17.1■□□□□ 0.33
DNMT1-205ENST00000585920 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
DNMT1-205ENST00000585920 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
DNMT1-205ENST00000585920 ITGB4P16144 1822 aa17.09■□□□□ 0.33
DNMT1-205ENST00000585920 KCNQ4P56696 695 aa17.08■□□□□ 0.32
DNMT1-205ENST00000585920 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
DNMT1-205ENST00000585920 BABAM1Q9NWV8 329 aa17.08■□□□□ 0.32
DNMT1-205ENST00000585920 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
DNMT1-205ENST00000585920 KCNQ3O43525 872 aa17.07■□□□□ 0.32
DNMT1-205ENST00000585920 NBPF14Q5TI25 921 aa17.07■□□□□ 0.32
DNMT1-205ENST00000585920 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
DNMT1-205ENST00000585920 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
DNMT1-205ENST00000585920 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
DNMT1-205ENST00000585920 CHL1O00533 1208 aa17.05■□□□□ 0.32
DNMT1-205ENST00000585920 GNAI1P63096 354 aa17.05■□□□□ 0.32
DNMT1-205ENST00000585920 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
DNMT1-205ENST00000585920 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
DNMT1-205ENST00000585920 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
DNMT1-205ENST00000585920 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
DNMT1-205ENST00000585920 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
DNMT1-205ENST00000585920 ITPK1Q13572 414 aa17.03■□□□□ 0.32
DNMT1-205ENST00000585920 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
DNMT1-205ENST00000585920 IL16Q14005 1332 aa17.02■□□□□ 0.32
DNMT1-205ENST00000585920 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
DNMT1-205ENST00000585920 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
DNMT1-205ENST00000585920 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms