RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.63
ATG4D-203ENST00000585752 PHF14O94880 888 aa25.2■■□□□ 1.62
ATG4D-203ENST00000585752 ATG3Q9NT62 314 aa25.2■■□□□ 1.62
ATG4D-203ENST00000585752 UBR3Q6ZT12 1888 aa25.18■■□□□ 1.62
ATG4D-203ENST00000585752 HMOX1P09601 288 aa25.18■■□□□ 1.62
ATG4D-203ENST00000585752 MSL1Q68DK7 614 aa25.18■■□□□ 1.62
ATG4D-203ENST00000585752 GPR162Q16538 588 aa25.17■■□□□ 1.62
ATG4D-203ENST00000585752 KDRP35968 1356 aa25.17■■□□□ 1.62
ATG4D-203ENST00000585752 MAP3K5Q99683 1374 aa25.17■■□□□ 1.62
ATG4D-203ENST00000585752 NPC1L1Q9UHC9 1359 aa25.17■■□□□ 1.62
ATG4D-203ENST00000585752 PELP1Q8IZL8 1130 aaKnown RBP25.16■■□□□ 1.62
ATG4D-203ENST00000585752 VIRMAQ69YN4 1812 aaKnown RBP25.16■■□□□ 1.62
ATG4D-203ENST00000585752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.15■■□□□ 1.62
ATG4D-203ENST00000585752 GNPATO15228 680 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 SSFA2P28290 1259 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 AKAP4Q5JQC9 854 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 LINC00116Q8NCU8 138 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 CHD4Q14839 1912 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 SCN11AQ9UI33 1791 aa25.15■■□□□ 1.62
ATG4D-203ENST00000585752 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
ATG4D-203ENST00000585752 CFAP53Q96M91 514 aa25.14■■□□□ 1.62
ATG4D-203ENST00000585752 NFATC2IPQ8NCF5 419 aa25.13■■□□□ 1.61
ATG4D-203ENST00000585752 KDM6AO15550 1401 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-203ENST00000585752 DDX10Q13206 875 aaKnown RBP25.12■■□□□ 1.61
ATG4D-203ENST00000585752 ITPK1Q13572 414 aa25.12■■□□□ 1.61
ATG4D-203ENST00000585752 ZNF316A6NFI3 1004 aaPredicted RBP25.11■■□□□ 1.61
ATG4D-203ENST00000585752 RTCBQ9Y3I0 505 aaKnown RBP25.11■■□□□ 1.61
ATG4D-203ENST00000585752 ZNF831Q5JPB2 1677 aa25.1■■□□□ 1.61
ATG4D-203ENST00000585752 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
ATG4D-203ENST00000585752 TRAPPC3LQ5T215 181 aa25.09■■□□□ 1.61
ATG4D-203ENST00000585752 SMIM5Q71RC9 77 aa25.06■■□□□ 1.6
ATG4D-203ENST00000585752 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
ATG4D-203ENST00000585752 MTHFSDQ2M296 383 aaKnown RBP25.05■■□□□ 1.6
ATG4D-203ENST00000585752 RC3H1Q5TC82 1133 aaKnown RBP25.05■■□□□ 1.6
ATG4D-203ENST00000585752 COL5A3P25940 1745 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-203ENST00000585752 NLGN2Q8NFZ4 835 aa25.04■■□□□ 1.6
ATG4D-203ENST00000585752 SLC52A2Q9HAB3 445 aa25.04■■□□□ 1.6
ATG4D-203ENST00000585752 CD2APQ9Y5K6 639 aa25.04■■□□□ 1.6
ATG4D-203ENST00000585752 RNMTO43148 476 aaKnown RBP25.03■■□□□ 1.6
ATG4D-203ENST00000585752 RFC4P35249 363 aa25.03■■□□□ 1.6
ATG4D-203ENST00000585752 GAS2L2Q8NHY3 880 aa25.03■■□□□ 1.6
ATG4D-203ENST00000585752 LGR6Q9HBX8 967 aa25.03■■□□□ 1.6
ATG4D-203ENST00000585752 CNTNAP4Q9C0A0 1308 aa25.03■■□□□ 1.6
ATG4D-203ENST00000585752 ADRA2BP18089 450 aa25.02■■□□□ 1.6
ATG4D-203ENST00000585752 AMIGO3Q86WK7 504 aa25.02■■□□□ 1.6
ATG4D-203ENST00000585752 SLC4A9Q96Q91 983 aa25.01■■□□□ 1.59
ATG4D-203ENST00000585752 GRIN3BO60391 1043 aa25■■□□□ 1.59
ATG4D-203ENST00000585752 RPS6KA4O75676 772 aa25■■□□□ 1.59
ATG4D-203ENST00000585752 NLGN1Q8N2Q7 840 aa24.99■■□□□ 1.59
ATG4D-203ENST00000585752 COL3A1P02461 1466 aaPredicted RBP24.98■■□□□ 1.59
ATG4D-203ENST00000585752 TEFQ10587 303 aa24.98■■□□□ 1.59
ATG4D-203ENST00000585752 ARHGEF1Q92888 912 aaKnown RBP24.98■■□□□ 1.59
ATG4D-203ENST00000585752 MYH14Q7Z406 1995 aaKnown RBP24.98■■□□□ 1.59
ATG4D-203ENST00000585752 GNAT3A8MTJ3 354 aa24.97■■□□□ 1.59
ATG4D-203ENST00000585752 PPP2R1AP30153 589 aa24.97■■□□□ 1.59
ATG4D-203ENST00000585752 CRKLP46109 303 aaKnown RBP24.97■■□□□ 1.59
ATG4D-203ENST00000585752 TTC5Q8N0Z6 440 aa24.97■■□□□ 1.59
ATG4D-203ENST00000585752 MMP10P09238 476 aa24.95■■□□□ 1.58
ATG4D-203ENST00000585752 U2AF1L5P0DN76 240 aaPredicted RBP24.95■■□□□ 1.58
ATG4D-203ENST00000585752 U2AF1Q01081 240 aaKnown RBP eCLIP24.95■■□□□ 1.58
ATG4D-203ENST00000585752 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
ATG4D-203ENST00000585752 TJP1Q07157 1748 aa24.95■■□□□ 1.58
ATG4D-203ENST00000585752 NEFMP07197 916 aa24.94■■□□□ 1.58
ATG4D-203ENST00000585752 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
ATG4D-203ENST00000585752 PARP3Q9Y6F1 533 aa24.93■■□□□ 1.58
ATG4D-203ENST00000585752 MRC1P22897 1456 aa24.92■■□□□ 1.58
ATG4D-203ENST00000585752 DNAJC10Q8IXB1 793 aa24.92■■□□□ 1.58
ATG4D-203ENST00000585752 C4AP0C0L4 1744 aa24.92■■□□□ 1.58
ATG4D-203ENST00000585752 CCDC87Q9NVE4 849 aa24.91■■□□□ 1.58
ATG4D-203ENST00000585752 CICQ96RK0 1608 aaPredicted RBP24.9■■□□□ 1.58
ATG4D-203ENST00000585752 ZPR1O75312 459 aa24.9■■□□□ 1.58
ATG4D-203ENST00000585752 RALBP1Q15311 655 aa24.9■■□□□ 1.58
ATG4D-203ENST00000585752 RTF1Q92541 710 aaKnown RBP24.9■■□□□ 1.58
ATG4D-203ENST00000585752 ADAMTS7Q9UKP4 1686 aa24.9■■□□□ 1.58
ATG4D-203ENST00000585752 YBX3P16989 372 aaKnown RBP eCLIP24.89■■□□□ 1.58
ATG4D-203ENST00000585752 GYS1P13807 737 aa24.88■■□□□ 1.57
ATG4D-203ENST00000585752 VSIG10Q8N0Z9 540 aa24.88■■□□□ 1.57
ATG4D-203ENST00000585752 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-203ENST00000585752 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
ATG4D-203ENST00000585752 FCHSD2O94868 740 aa24.87■■□□□ 1.57
ATG4D-203ENST00000585752 STARD3NLO95772 234 aa24.86■■□□□ 1.57
ATG4D-203ENST00000585752 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
ATG4D-203ENST00000585752 IL17REQ8NFR9 667 aa24.86■■□□□ 1.57
ATG4D-203ENST00000585752 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
ATG4D-203ENST00000585752 UBR2Q8IWV8 1755 aa24.85■■□□□ 1.57
ATG4D-203ENST00000585752 INTS5Q6P9B9 1019 aaKnown RBP24.85■■□□□ 1.57
ATG4D-203ENST00000585752 PHACTR3Q96KR7 559 aa24.85■■□□□ 1.57
ATG4D-203ENST00000585752 TEX13AQ9BXU3 409 aaPredicted RBP24.85■■□□□ 1.57
ATG4D-203ENST00000585752 CYP19A1P11511 503 aaPredicted RBP24.84■■□□□ 1.57
ATG4D-203ENST00000585752 SRP68Q9UHB9 627 aaKnown RBP24.84■■□□□ 1.57
ATG4D-203ENST00000585752 KIF13BQ9NQT8 1826 aa24.84■■□□□ 1.57
ATG4D-203ENST00000585752 USP42Q9H9J4 1324 aaKnown RBP24.84■■□□□ 1.57
ATG4D-203ENST00000585752 SIPA1L3O60292 1781 aaPredicted RBP24.83■■□□□ 1.57
ATG4D-203ENST00000585752 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
ATG4D-203ENST00000585752 KCPQ6ZWJ8 1503 aa24.83■■□□□ 1.57
ATG4D-203ENST00000585752 BTBD11A6QL63 1104 aa24.83■■□□□ 1.57
ATG4D-203ENST00000585752 TGFB2P61812 414 aa24.83■■□□□ 1.57
ATG4D-203ENST00000585752 ZNF790Q6PG37 636 aa24.83■■□□□ 1.57
ATG4D-203ENST00000585752 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
ATG4D-203ENST00000585752 USPL1Q5W0Q7 1092 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms