RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
SRSF1-208ENST00000584773 SYT17Q9BSW7 474 aa24.38■■□□□ 1.49
SRSF1-208ENST00000584773 SCN11AQ9UI33 1791 aa24.37■■□□□ 1.49
SRSF1-208ENST00000584773 AK7Q96M32 723 aa24.36■■□□□ 1.49
SRSF1-208ENST00000584773 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
SRSF1-208ENST00000584773 VIRMAQ69YN4 1812 aaKnown RBP24.36■■□□□ 1.49
SRSF1-208ENST00000584773 PHF14O94880 888 aa24.35■■□□□ 1.49
SRSF1-208ENST00000584773 ATP6V1AP38606 617 aa24.35■■□□□ 1.49
SRSF1-208ENST00000584773 CABP4P57796 275 aa24.35■■□□□ 1.49
SRSF1-208ENST00000584773 KLHL34Q8N239 644 aa24.35■■□□□ 1.49
SRSF1-208ENST00000584773 RBM42Q9BTD8 480 aaKnown RBP24.34■■□□□ 1.49
SRSF1-208ENST00000584773 U2SURPO15042 1029 aaKnown RBP24.33■■□□□ 1.48
SRSF1-208ENST00000584773 POLD1P28340 1107 aa24.33■■□□□ 1.48
SRSF1-208ENST00000584773 MTHFSDQ2M296 383 aaKnown RBP24.32■■□□□ 1.48
SRSF1-208ENST00000584773 AKAP4Q5JQC9 854 aa24.32■■□□□ 1.48
SRSF1-208ENST00000584773 NFATC2IPQ8NCF5 419 aa24.32■■□□□ 1.48
SRSF1-208ENST00000584773 LGR6Q9HBX8 967 aa24.32■■□□□ 1.48
SRSF1-208ENST00000584773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.31■■□□□ 1.48
SRSF1-208ENST00000584773 COL5A3P25940 1745 aaPredicted RBP24.3■■□□□ 1.48
SRSF1-208ENST00000584773 GNPATO15228 680 aa24.3■■□□□ 1.48
SRSF1-208ENST00000584773 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
SRSF1-208ENST00000584773 UTRNP46939 3433 aa24.28■■□□□ 1.48
SRSF1-208ENST00000584773 ZNF831Q5JPB2 1677 aa24.28■■□□□ 1.48
SRSF1-208ENST00000584773 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
SRSF1-208ENST00000584773 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
SRSF1-208ENST00000584773 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
SRSF1-208ENST00000584773 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
SRSF1-208ENST00000584773 TJP1Q07157 1748 aa24.26■■□□□ 1.47
SRSF1-208ENST00000584773 ADAMTS7Q9UKP4 1686 aa24.26■■□□□ 1.47
SRSF1-208ENST00000584773 NLGN2Q8NFZ4 835 aa24.26■■□□□ 1.47
SRSF1-208ENST00000584773 MYH14Q7Z406 1995 aaKnown RBP24.26■■□□□ 1.47
SRSF1-208ENST00000584773 MRC1P22897 1456 aa24.25■■□□□ 1.47
SRSF1-208ENST00000584773 DCAF8L1A6NGE4 600 aa24.25■■□□□ 1.47
SRSF1-208ENST00000584773 SSFA2P28290 1259 aa24.25■■□□□ 1.47
SRSF1-208ENST00000584773 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
SRSF1-208ENST00000584773 HMGB2P26583 209 aaKnown RBP24.24■■□□□ 1.47
SRSF1-208ENST00000584773 SLC39A6Q13433 755 aa24.23■■□□□ 1.47
SRSF1-208ENST00000584773 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
SRSF1-208ENST00000584773 YY1P25490 414 aa24.2■■□□□ 1.46
SRSF1-208ENST00000584773 PRKAR2BP31323 418 aa24.2■■□□□ 1.46
SRSF1-208ENST00000584773 PHACTR3Q96KR7 559 aa24.2■■□□□ 1.46
SRSF1-208ENST00000584773 RSPH6AQ9H0K4 717 aa24.2■■□□□ 1.46
SRSF1-208ENST00000584773 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
SRSF1-208ENST00000584773 RTCBQ9Y3I0 505 aaKnown RBP24.19■■□□□ 1.46
SRSF1-208ENST00000584773 GOLGB1Q14789 3259 aaKnown RBP24.19■■□□□ 1.46
SRSF1-208ENST00000584773 KCPQ6ZWJ8 1503 aa24.18■■□□□ 1.46
SRSF1-208ENST00000584773 CICQ96RK0 1608 aaPredicted RBP24.18■■□□□ 1.46
SRSF1-208ENST00000584773 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
SRSF1-208ENST00000584773 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
SRSF1-208ENST00000584773 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
SRSF1-208ENST00000584773 CRKLP46109 303 aaKnown RBP24.16■■□□□ 1.46
SRSF1-208ENST00000584773 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.464e-9■■□□□ 14.5
SRSF1-208ENST00000584773 RC3H1Q5TC82 1133 aaKnown RBP24.16■■□□□ 1.46
SRSF1-208ENST00000584773 DNAJC10Q8IXB1 793 aa24.16■■□□□ 1.46
SRSF1-208ENST00000584773 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
SRSF1-208ENST00000584773 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
SRSF1-208ENST00000584773 ARHGEF1Q92888 912 aaKnown RBP24.16■■□□□ 1.46
SRSF1-208ENST00000584773 RPS6KA4O75676 772 aa24.15■■□□□ 1.46
SRSF1-208ENST00000584773 TRAPPC3LQ5T215 181 aa24.15■■□□□ 1.46
SRSF1-208ENST00000584773 SIPA1L3O60292 1781 aaPredicted RBP24.14■■□□□ 1.46
SRSF1-208ENST00000584773 GPR162Q16538 588 aa24.14■■□□□ 1.46
SRSF1-208ENST00000584773 NUDCQ9Y266 331 aa24.14■■□□□ 1.46
SRSF1-208ENST00000584773 UBR2Q8IWV8 1755 aa24.14■■□□□ 1.45
SRSF1-208ENST00000584773 GNAT3A8MTJ3 354 aa24.13■■□□□ 1.45
SRSF1-208ENST00000584773 INTS5Q6P9B9 1019 aaKnown RBP24.11■■□□□ 1.45
SRSF1-208ENST00000584773 MMP10P09238 476 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 SRP68Q9UHB9 627 aaKnown RBP24.1■■□□□ 1.45
SRSF1-208ENST00000584773 CHD4Q14839 1912 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 GYS1P13807 737 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 YBX3P16989 372 aaKnown RBP eCLIP24.1■■□□□ 1.45
SRSF1-208ENST00000584773 ADRA2BP18089 450 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 RFC4P35249 363 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 DDX10Q13206 875 aaKnown RBP24.1■■□□□ 1.45
SRSF1-208ENST00000584773 WWC3Q9ULE0 1092 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 CD2APQ9Y5K6 639 aa24.1■■□□□ 1.45
SRSF1-208ENST00000584773 CYP19A1P11511 503 aaPredicted RBP24.09■■□□□ 1.45
SRSF1-208ENST00000584773 TEFQ10587 303 aa24.09■■□□□ 1.45
SRSF1-208ENST00000584773 CCDC87Q9NVE4 849 aa24.08■■□□□ 1.44
SRSF1-208ENST00000584773 CEMIPQ8WUJ3 1361 aa24.07■■□□□ 1.44
SRSF1-208ENST00000584773 FCHSD2O94868 740 aa24.07■■□□□ 1.44
SRSF1-208ENST00000584773 MCM10Q7L590 875 aa24.06■■□□□ 1.44
SRSF1-208ENST00000584773 TTC5Q8N0Z6 440 aa24.06■■□□□ 1.44
SRSF1-208ENST00000584773 ZBTB1Q9Y2K1 713 aa24.06■■□□□ 1.44
SRSF1-208ENST00000584773 KCNQ3O43525 872 aa24.05■■□□□ 1.44
SRSF1-208ENST00000584773 DCTN1Q14203 1278 aa24.05■■□□□ 1.44
SRSF1-208ENST00000584773 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
SRSF1-208ENST00000584773 SOS1Q07889 1333 aaPredicted RBP24.04■■□□□ 1.44
SRSF1-208ENST00000584773 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
SRSF1-208ENST00000584773 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
SRSF1-208ENST00000584773 NLGN1Q8N2Q7 840 aa24.04■■□□□ 1.44
SRSF1-208ENST00000584773 FKBP8Q14318 412 aa24.03■■□□□ 1.44
SRSF1-208ENST00000584773 KIF13BQ9NQT8 1826 aa24.03■■□□□ 1.44
SRSF1-208ENST00000584773 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
SRSF1-208ENST00000584773 DLG5Q8TDM6 1919 aa24.02■■□□□ 1.44
SRSF1-208ENST00000584773 N4BP2Q86UW6 1770 aaPredicted RBP24.02■■□□□ 1.44
SRSF1-208ENST00000584773 VSIG10Q8N0Z9 540 aa24.02■■□□□ 1.44
SRSF1-208ENST00000584773 HEG1Q9ULI3 1381 aa24.01■■□□□ 1.43
SRSF1-208ENST00000584773 BTBD11A6QL63 1104 aa24■■□□□ 1.43
SRSF1-208ENST00000584773 CANXP27824 592 aaKnown RBP24■■□□□ 1.43
SRSF1-208ENST00000584773 USPL1Q5W0Q7 1092 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms