RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 HMOX1P09601 288 aa17.73■□□□□ 0.43
ERBB2-220ENST00000584684 FLAD1Q8NFF5 587 aa17.73■□□□□ 0.43
ERBB2-220ENST00000584684 CABP4P57796 275 aa17.72■□□□□ 0.43
ERBB2-220ENST00000584684 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
ERBB2-220ENST00000584684 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
ERBB2-220ENST00000584684 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
ERBB2-220ENST00000584684 ITPK1Q13572 414 aa17.7■□□□□ 0.42
ERBB2-220ENST00000584684 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
ERBB2-220ENST00000584684 AK7Q96M32 723 aa17.7■□□□□ 0.42
ERBB2-220ENST00000584684 ARXQ96QS3 562 aa17.7■□□□□ 0.42
ERBB2-220ENST00000584684 TJP1Q07157 1748 aa17.69■□□□□ 0.42
ERBB2-220ENST00000584684 SSFA2P28290 1259 aa17.69■□□□□ 0.42
ERBB2-220ENST00000584684 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
ERBB2-220ENST00000584684 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
ERBB2-220ENST00000584684 POLD1P28340 1107 aa17.68■□□□□ 0.42
ERBB2-220ENST00000584684 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
ERBB2-220ENST00000584684 MTHFSDQ2M296 383 aaKnown RBP17.68■□□□□ 0.42
ERBB2-220ENST00000584684 FHDC1Q9C0D6 1143 aaPredicted RBP17.68■□□□□ 0.42
ERBB2-220ENST00000584684 UBR2Q8IWV8 1755 aa17.68■□□□□ 0.42
ERBB2-220ENST00000584684 SIPA1L3O60292 1781 aaPredicted RBP17.67■□□□□ 0.42
ERBB2-220ENST00000584684 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
ERBB2-220ENST00000584684 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
ERBB2-220ENST00000584684 SYT17Q9BSW7 474 aa17.67■□□□□ 0.42
ERBB2-220ENST00000584684 SLC52A2Q9HAB3 445 aa17.67■□□□□ 0.42
ERBB2-220ENST00000584684 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
ERBB2-220ENST00000584684 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
ERBB2-220ENST00000584684 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
ERBB2-220ENST00000584684 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
ERBB2-220ENST00000584684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
ERBB2-220ENST00000584684 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
ERBB2-220ENST00000584684 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
ERBB2-220ENST00000584684 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
ERBB2-220ENST00000584684 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
ERBB2-220ENST00000584684 GNPATO15228 680 aa17.64■□□□□ 0.41
ERBB2-220ENST00000584684 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
ERBB2-220ENST00000584684 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
ERBB2-220ENST00000584684 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
ERBB2-220ENST00000584684 MSH5O43196 834 aa17.63■□□□□ 0.41
ERBB2-220ENST00000584684 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
ERBB2-220ENST00000584684 ADRA2BP18089 450 aa17.62■□□□□ 0.41
ERBB2-220ENST00000584684 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
ERBB2-220ENST00000584684 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
ERBB2-220ENST00000584684 UTRNP46939 3433 aa17.61■□□□□ 0.41
ERBB2-220ENST00000584684 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
ERBB2-220ENST00000584684 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
ERBB2-220ENST00000584684 FCHSD2O94868 740 aa17.61■□□□□ 0.41
ERBB2-220ENST00000584684 PHF14O94880 888 aa17.61■□□□□ 0.41
ERBB2-220ENST00000584684 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
ERBB2-220ENST00000584684 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
ERBB2-220ENST00000584684 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
ERBB2-220ENST00000584684 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
ERBB2-220ENST00000584684 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
ERBB2-220ENST00000584684 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
ERBB2-220ENST00000584684 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
ERBB2-220ENST00000584684 RALBP1Q15311 655 aa17.58■□□□□ 0.4
ERBB2-220ENST00000584684 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
ERBB2-220ENST00000584684 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
ERBB2-220ENST00000584684 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
ERBB2-220ENST00000584684 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
ERBB2-220ENST00000584684 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
ERBB2-220ENST00000584684 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
ERBB2-220ENST00000584684 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
ERBB2-220ENST00000584684 TEFQ10587 303 aa17.55■□□□□ 0.4
ERBB2-220ENST00000584684 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
ERBB2-220ENST00000584684 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
ERBB2-220ENST00000584684 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
ERBB2-220ENST00000584684 CHD4Q14839 1912 aa17.53■□□□□ 0.4
ERBB2-220ENST00000584684 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
ERBB2-220ENST00000584684 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
ERBB2-220ENST00000584684 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
ERBB2-220ENST00000584684 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
ERBB2-220ENST00000584684 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
ERBB2-220ENST00000584684 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
ERBB2-220ENST00000584684 NLGN2Q8NFZ4 835 aa17.53■□□□□ 0.4
ERBB2-220ENST00000584684 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
ERBB2-220ENST00000584684 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
ERBB2-220ENST00000584684 ZNF790Q6PG37 636 aa17.52■□□□□ 0.4
ERBB2-220ENST00000584684 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.4
ERBB2-220ENST00000584684 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
ERBB2-220ENST00000584684 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
ERBB2-220ENST00000584684 SOS1Q07889 1333 aaPredicted RBP17.51■□□□□ 0.39
ERBB2-220ENST00000584684 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
ERBB2-220ENST00000584684 GYS1P13807 737 aa17.51■□□□□ 0.39
ERBB2-220ENST00000584684 RFC4P35249 363 aa17.51■□□□□ 0.39
ERBB2-220ENST00000584684 HEG1Q9ULI3 1381 aa17.51■□□□□ 0.39
ERBB2-220ENST00000584684 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
ERBB2-220ENST00000584684 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
ERBB2-220ENST00000584684 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
ERBB2-220ENST00000584684 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
ERBB2-220ENST00000584684 MMP10P09238 476 aa17.49■□□□□ 0.39
ERBB2-220ENST00000584684 RTF1Q92541 710 aaKnown RBP17.49■□□□□ 0.39
ERBB2-220ENST00000584684 ZNF496Q96IT1 587 aaPredicted RBP17.49■□□□□ 0.39
ERBB2-220ENST00000584684 COL15A1P39059 1388 aa17.49■□□□□ 0.39
ERBB2-220ENST00000584684 NEFMP07197 916 aa17.48■□□□□ 0.39
ERBB2-220ENST00000584684 YY1P25490 414 aa17.48■□□□□ 0.39
ERBB2-220ENST00000584684 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
ERBB2-220ENST00000584684 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
ERBB2-220ENST00000584684 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
ERBB2-220ENST00000584684 STARD3NLO95772 234 aa17.47■□□□□ 0.39
ERBB2-220ENST00000584684 FMNL2Q96PY5 1086 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms