RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
CDK5RAP3-230ENST00000584042 TAF7Q15545 349 aaPredicted RBP21.71■■□□□ 1.07
CDK5RAP3-230ENST00000584042 TSR2Q969E8 191 aaKnown RBP21.71■■□□□ 1.07
CDK5RAP3-230ENST00000584042 BRWD3Q6RI45 1802 aa21.71■■□□□ 1.07
CDK5RAP3-230ENST00000584042 NHSQ6T4R5 1651 aa21.7■■□□□ 1.06
CDK5RAP3-230ENST00000584042 A0A0G2JS52 829 aa21.7■■□□□ 1.06
CDK5RAP3-230ENST00000584042 MYT1Q01538 1121 aa21.7■■□□□ 1.06
CDK5RAP3-230ENST00000584042 TSPYL4Q9UJ04 414 aa21.7■■□□□ 1.06
CDK5RAP3-230ENST00000584042 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
CDK5RAP3-230ENST00000584042 CT47B1P0C2W7 299 aaPredicted RBP21.69■■□□□ 1.06
CDK5RAP3-230ENST00000584042 MARCH10Q8NA82 808 aaPredicted RBP21.69■■□□□ 1.06
CDK5RAP3-230ENST00000584042 SEPT12Q8IYM1 358 aa21.67■■□□□ 1.06
CDK5RAP3-230ENST00000584042 RGS17Q9UGC6 210 aaPredicted RBP21.67■■□□□ 1.06
CDK5RAP3-230ENST00000584042 BTBD11A6QL63 1104 aa21.66■■□□□ 1.06
CDK5RAP3-230ENST00000584042 CABP4P57796 275 aa21.66■■□□□ 1.06
CDK5RAP3-230ENST00000584042 RGS12O14924 1447 aa21.65■■□□□ 1.06
CDK5RAP3-230ENST00000584042 SBF2Q86WG5 1849 aa21.65■■□□□ 1.06
CDK5RAP3-230ENST00000584042 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-230ENST00000584042 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.06
CDK5RAP3-230ENST00000584042 SOS1Q07889 1333 aaPredicted RBP21.64■■□□□ 1.05
CDK5RAP3-230ENST00000584042 KCPQ6ZWJ8 1503 aa21.64■■□□□ 1.05
CDK5RAP3-230ENST00000584042 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
CDK5RAP3-230ENST00000584042 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
CDK5RAP3-230ENST00000584042 RXRBP28702 533 aa21.62■■□□□ 1.05
CDK5RAP3-230ENST00000584042 MIS18AQ9NYP9 233 aa21.62■■□□□ 1.05
CDK5RAP3-230ENST00000584042 C5P01031 1676 aa21.62■■□□□ 1.05
CDK5RAP3-230ENST00000584042 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
CDK5RAP3-230ENST00000584042 RCAN3Q9UKA8 241 aa21.61■■□□□ 1.05
CDK5RAP3-230ENST00000584042 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
CDK5RAP3-230ENST00000584042 HEG1Q9ULI3 1381 aa21.61■■□□□ 1.05
CDK5RAP3-230ENST00000584042 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
CDK5RAP3-230ENST00000584042 EIF4A1P60842 406 aaKnown RBP21.59■■□□□ 1.05
CDK5RAP3-230ENST00000584042 TWISTNBQ3B726 338 aaPredicted RBP21.59■■□□□ 1.05
CDK5RAP3-230ENST00000584042 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
CDK5RAP3-230ENST00000584042 BTAF1O14981 1849 aa21.58■■□□□ 1.05
CDK5RAP3-230ENST00000584042 HOXB7P09629 217 aa21.58■■□□□ 1.05
CDK5RAP3-230ENST00000584042 TTC5Q8N0Z6 440 aa21.58■■□□□ 1.05
CDK5RAP3-230ENST00000584042 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.05
CDK5RAP3-230ENST00000584042 KRT27Q7Z3Y8 459 aa21.57■■□□□ 1.04
CDK5RAP3-230ENST00000584042 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
CDK5RAP3-230ENST00000584042 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
CDK5RAP3-230ENST00000584042 KCNQ3O43525 872 aa21.56■■□□□ 1.04
CDK5RAP3-230ENST00000584042 TSPYL6Q8N831 410 aa21.56■■□□□ 1.04
CDK5RAP3-230ENST00000584042 PIGBQ92521 554 aa21.56■■□□□ 1.04
CDK5RAP3-230ENST00000584042 VAMP4O75379 141 aa21.55■■□□□ 1.04
CDK5RAP3-230ENST00000584042 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
CDK5RAP3-230ENST00000584042 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
CDK5RAP3-230ENST00000584042 KRT24Q2M2I5 525 aa21.55■■□□□ 1.04
CDK5RAP3-230ENST00000584042 CACNA1FO60840 1977 aa21.55■■□□□ 1.04
CDK5RAP3-230ENST00000584042 RARSP54136 660 aaKnown RBP21.54■■□□□ 1.04
CDK5RAP3-230ENST00000584042 ALDH1L2Q3SY69 923 aa21.54■■□□□ 1.04
CDK5RAP3-230ENST00000584042 SYTL4Q96C24 671 aaPredicted RBP21.54■■□□□ 1.04
CDK5RAP3-230ENST00000584042 FMNL2Q96PY5 1086 aa21.54■■□□□ 1.04
CDK5RAP3-230ENST00000584042 TJP1Q07157 1748 aa21.53■■□□□ 1.04
CDK5RAP3-230ENST00000584042 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
CDK5RAP3-230ENST00000584042 RNF123Q5XPI4 1314 aa21.53■■□□□ 1.04
CDK5RAP3-230ENST00000584042 ZNF496Q96IT1 587 aaPredicted RBP21.52■■□□□ 1.04
CDK5RAP3-230ENST00000584042 GIGYF1O75420 1035 aaPredicted RBP21.51■■□□□ 1.03
CDK5RAP3-230ENST00000584042 FAM196AQ6ZSG2 479 aa21.51■■□□□ 1.03
CDK5RAP3-230ENST00000584042 CHMP4AQ9BY43 222 aa21.51■■□□□ 1.03
CDK5RAP3-230ENST00000584042 ATG3Q9NT62 314 aa21.51■■□□□ 1.03
CDK5RAP3-230ENST00000584042 LY75O60449 1722 aa21.51■■□□□ 1.03
CDK5RAP3-230ENST00000584042 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
CDK5RAP3-230ENST00000584042 BRPF1P55201 1214 aaPredicted RBP21.49■■□□□ 1.03
CDK5RAP3-230ENST00000584042 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
CDK5RAP3-230ENST00000584042 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
CDK5RAP3-230ENST00000584042 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 KCNQ2O43526 872 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 SNRPA1P09661 255 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 RRP1P56182 461 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 FAM182BQ5T319 152 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 TNS1Q9HBL0 1735 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 KIF16BQ96L93 1317 aa21.48■■□□□ 1.03
CDK5RAP3-230ENST00000584042 COL5A3P25940 1745 aaPredicted RBP21.47■■□□□ 1.03
CDK5RAP3-230ENST00000584042 HDGFL1Q5TGJ6 251 aa21.47■■□□□ 1.03
CDK5RAP3-230ENST00000584042 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
CDK5RAP3-230ENST00000584042 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
CDK5RAP3-230ENST00000584042 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
CDK5RAP3-230ENST00000584042 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
CDK5RAP3-230ENST00000584042 RREB1Q92766 1687 aa21.46■■□□□ 1.03
CDK5RAP3-230ENST00000584042 BCAR3O75815 825 aa21.45■■□□□ 1.02
CDK5RAP3-230ENST00000584042 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP3-230ENST00000584042 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP3-230ENST00000584042 BCL2L13Q9BXK5 485 aa21.44■■□□□ 1.02
CDK5RAP3-230ENST00000584042 STK31Q9BXU1 1019 aa21.44■■□□□ 1.02
CDK5RAP3-230ENST00000584042 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
CDK5RAP3-230ENST00000584042 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
CDK5RAP3-230ENST00000584042 MRPL50Q8N5N7 158 aaKnown RBP21.43■■□□□ 1.02
CDK5RAP3-230ENST00000584042 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
CDK5RAP3-230ENST00000584042 N4BP2Q86UW6 1770 aaPredicted RBP21.42■■□□□ 1.02
CDK5RAP3-230ENST00000584042 EP400Q96L91 3159 aa21.42■■□□□ 1.02
CDK5RAP3-230ENST00000584042 TEX13AQ9BXU3 409 aaPredicted RBP21.42■■□□□ 1.02
CDK5RAP3-230ENST00000584042 LOC102724428A0A0B4J2F2 783 aa21.4■■□□□ 1.02
CDK5RAP3-230ENST00000584042 EIF2S2P20042 333 aaKnown RBP21.4■■□□□ 1.02
CDK5RAP3-230ENST00000584042 SIK1P57059 783 aa21.4■■□□□ 1.02
CDK5RAP3-230ENST00000584042 PTF1AQ7RTS3 328 aa21.4■■□□□ 1.02
CDK5RAP3-230ENST00000584042 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms