RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 FAM184AQ8NB25 1140 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 E9PCH4 1651 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 PNMA6EA0A0J9YXQ4 647 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 FLIIQ13045 1269 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 TEFQ10587 303 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 FILIP1Q7Z7B0 1213 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
RNF43-207ENST00000583753 PDRG1Q9NUG6 133 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 STX6O43752 255 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
RNF43-207ENST00000583753 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
RNF43-207ENST00000583753 GPATCH3Q96I76 525 aa12.66□□□□□ -0.38
RNF43-207ENST00000583753 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
RNF43-207ENST00000583753 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
RNF43-207ENST00000583753 A0A0G2JS52 829 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 GJB2P29033 226 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 ZDHHC9Q9Y397 364 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 CCDC192P0DO97 292 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 CHMLP26374 656 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 IL13P35225 146 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
RNF43-207ENST00000583753 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
RNF43-207ENST00000583753 WASLO00401 505 aaPredicted RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 AK2P54819 239 aa12.64□□□□□ -0.39
RNF43-207ENST00000583753 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
RNF43-207ENST00000583753 ABCC4O15439 1325 aa12.63□□□□□ -0.39
RNF43-207ENST00000583753 SF3A1Q15459 793 aaKnown RBP12.63□□□□□ -0.39
RNF43-207ENST00000583753 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
RNF43-207ENST00000583753 AACSQ86V21 672 aa12.63□□□□□ -0.39
RNF43-207ENST00000583753 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
RNF43-207ENST00000583753 SYT1P21579 422 aa12.62□□□□□ -0.39
RNF43-207ENST00000583753 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF43-207ENST00000583753 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
RNF43-207ENST00000583753 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
RNF43-207ENST00000583753 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
RNF43-207ENST00000583753 KRT85P78386 507 aa12.62□□□□□ -0.39
RNF43-207ENST00000583753 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
RNF43-207ENST00000583753 PTGS1P23219 599 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 GUCY1B3Q02153 619 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
RNF43-207ENST00000583753 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
RNF43-207ENST00000583753 ERICH4A6NGS2 130 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
RNF43-207ENST00000583753 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 BRD1O95696 1058 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 DDIT3P35638 169 aa12.61□□□□□ -0.39
RNF43-207ENST00000583753 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
RNF43-207ENST00000583753 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
RNF43-207ENST00000583753 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 CDC42BPBQ9Y5S2 1711 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.391e-8■■□□□ 13.9
RNF43-207ENST00000583753 MCM5P33992 734 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
RNF43-207ENST00000583753 PTPRCP08575 1304 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 UBE2HP62256 183 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
RNF43-207ENST00000583753 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
RNF43-207ENST00000583753 HOMER1Q86YM7 354 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
RNF43-207ENST00000583753 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 PREX2Q70Z35 1606 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 LETM1O95202 739 aaPredicted RBP12.59□□□□□ -0.39
RNF43-207ENST00000583753 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
RNF43-207ENST00000583753 F13A1P00488 732 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 TNNT1P13805 278 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 FAM69CQ0P6D2 419 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 NPATQ14207 1427 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms