RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
PRKCA-204ENST00000583361 ARXQ96QS3 562 aa10.63□□□□□ -0.71
PRKCA-204ENST00000583361 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
PRKCA-204ENST00000583361 COL5A3P25940 1745 aaPredicted RBP10.62□□□□□ -0.71
PRKCA-204ENST00000583361 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
PRKCA-204ENST00000583361 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
PRKCA-204ENST00000583361 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
PRKCA-204ENST00000583361 FHDC1Q9C0D6 1143 aaPredicted RBP10.62□□□□□ -0.71
PRKCA-204ENST00000583361 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
PRKCA-204ENST00000583361 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
PRKCA-204ENST00000583361 COL24A1Q17RW2 1714 aa10.61□□□□□ -0.71
PRKCA-204ENST00000583361 CHD4Q14839 1912 aa10.61□□□□□ -0.71
PRKCA-204ENST00000583361 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
PRKCA-204ENST00000583361 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
PRKCA-204ENST00000583361 NFATC2IPQ8NCF5 419 aa10.61□□□□□ -0.71
PRKCA-204ENST00000583361 LINC00116Q8NCU8 138 aa10.61□□□□□ -0.71
PRKCA-204ENST00000583361 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
PRKCA-204ENST00000583361 MYH14Q7Z406 1995 aaKnown RBP10.61□□□□□ -0.71
PRKCA-204ENST00000583361 GNPATO15228 680 aa10.6□□□□□ -0.71
PRKCA-204ENST00000583361 PPP2R1AP30153 589 aa10.6□□□□□ -0.71
PRKCA-204ENST00000583361 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
PRKCA-204ENST00000583361 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
PRKCA-204ENST00000583361 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
PRKCA-204ENST00000583361 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
PRKCA-204ENST00000583361 DLG5Q8TDM6 1919 aa10.59□□□□□ -0.71
PRKCA-204ENST00000583361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
PRKCA-204ENST00000583361 U2AF1L5P0DN76 240 aaPredicted RBP10.59□□□□□ -0.71
PRKCA-204ENST00000583361 U2AF1Q01081 240 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRKCA-204ENST00000583361 ITPK1Q13572 414 aa10.59□□□□□ -0.71
PRKCA-204ENST00000583361 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
PRKCA-204ENST00000583361 TJP1Q07157 1748 aa10.58□□□□□ -0.72
PRKCA-204ENST00000583361 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
PRKCA-204ENST00000583361 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
PRKCA-204ENST00000583361 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
PRKCA-204ENST00000583361 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
PRKCA-204ENST00000583361 C4AP0C0L4 1744 aa10.58□□□□□ -0.72
PRKCA-204ENST00000583361 MAP3K5Q99683 1374 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 NEFMP07197 916 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 SSFA2P28290 1259 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 TEFQ10587 303 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 DDX10Q13206 875 aaKnown RBP10.57□□□□□ -0.72
PRKCA-204ENST00000583361 SLC52A2Q9HAB3 445 aa10.57□□□□□ -0.72
PRKCA-204ENST00000583361 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
PRKCA-204ENST00000583361 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
PRKCA-204ENST00000583361 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 SLC39A6Q13433 755 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 GPR162Q16538 588 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 ADAMTS7Q9UKP4 1686 aa10.56□□□□□ -0.72
PRKCA-204ENST00000583361 UBR2Q8IWV8 1755 aa10.55□□□□□ -0.72
PRKCA-204ENST00000583361 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
PRKCA-204ENST00000583361 RTF1Q92541 710 aaKnown RBP10.55□□□□□ -0.72
PRKCA-204ENST00000583361 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
PRKCA-204ENST00000583361 MRC1P22897 1456 aa10.55□□□□□ -0.72
PRKCA-204ENST00000583361 YY1P25490 414 aa10.54□□□□□ -0.72
PRKCA-204ENST00000583361 RFC4P35249 363 aa10.54□□□□□ -0.72
PRKCA-204ENST00000583361 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
PRKCA-204ENST00000583361 CNTNAP4Q9C0A0 1308 aa10.54□□□□□ -0.72
PRKCA-204ENST00000583361 CRKLP46109 303 aaKnown RBP10.53□□□□□ -0.72
PRKCA-204ENST00000583361 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
PRKCA-204ENST00000583361 NLGN2Q8NFZ4 835 aa10.53□□□□□ -0.72
PRKCA-204ENST00000583361 PHACTR3Q96KR7 559 aa10.53□□□□□ -0.72
PRKCA-204ENST00000583361 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
PRKCA-204ENST00000583361 N4BP2Q86UW6 1770 aaPredicted RBP10.52□□□□□ -0.72
PRKCA-204ENST00000583361 RPS6KA4O75676 772 aa10.52□□□□□ -0.73
PRKCA-204ENST00000583361 FCHSD2O94868 740 aa10.52□□□□□ -0.73
PRKCA-204ENST00000583361 RC3H1Q5TC82 1133 aaKnown RBP10.52□□□□□ -0.73
PRKCA-204ENST00000583361 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
PRKCA-204ENST00000583361 ADRA2BP18089 450 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 ZEB1P37275 1124 aaPredicted RBP10.51□□□□□ -0.73
PRKCA-204ENST00000583361 RALBP1Q15311 655 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 IL17REQ8NFR9 667 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 WWC3Q9ULE0 1092 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
PRKCA-204ENST00000583361 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 MAPK8IP3Q9UPT6 1336 aa10.51□□□□□ -0.73
PRKCA-204ENST00000583361 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
PRKCA-204ENST00000583361 MMP10P09238 476 aa10.5□□□□□ -0.73
PRKCA-204ENST00000583361 CANXP27824 592 aaKnown RBP10.5□□□□□ -0.73
PRKCA-204ENST00000583361 MCM10Q7L590 875 aa10.5□□□□□ -0.73
PRKCA-204ENST00000583361 NPM2Q86SE8 214 aaKnown RBP10.5□□□□□ -0.73
PRKCA-204ENST00000583361 NLGN1Q8N2Q7 840 aa10.5□□□□□ -0.73
PRKCA-204ENST00000583361 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
PRKCA-204ENST00000583361 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
PRKCA-204ENST00000583361 KIF13BQ9NQT8 1826 aa10.49□□□□□ -0.73
PRKCA-204ENST00000583361 ZPR1O75312 459 aa10.49□□□□□ -0.73
PRKCA-204ENST00000583361 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
PRKCA-204ENST00000583361 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
PRKCA-204ENST00000583361 SRP68Q9UHB9 627 aaKnown RBP10.49□□□□□ -0.73
PRKCA-204ENST00000583361 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
PRKCA-204ENST00000583361 AFDNP55196 1824 aaKnown RBP10.49□□□□□ -0.73
PRKCA-204ENST00000583361 STARD3NLO95772 234 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
PRKCA-204ENST00000583361 GYS1P13807 737 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
PRKCA-204ENST00000583361 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
PRKCA-204ENST00000583361 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms