RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
PPP4R1-222ENST00000582594 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-222ENST00000582594 AGLP35573 1532 aa11.61□□□□□ -0.55
PPP4R1-222ENST00000582594 SYAP1Q96A49 352 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-222ENST00000582594 TCHHQ07283 1943 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 HMMRO75330 724 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 MCCP23508 829 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 COG3Q96JB2 828 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 CUL4AQ13619 759 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
PPP4R1-222ENST00000582594 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-222ENST00000582594 SOX12O15370 315 aa11.59□□□□□ -0.55
PPP4R1-222ENST00000582594 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
PPP4R1-222ENST00000582594 ADCY5O95622 1261 aa11.58□□□□□ -0.55
PPP4R1-222ENST00000582594 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.55
PPP4R1-222ENST00000582594 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.55
PPP4R1-222ENST00000582594 MYRIPQ8NFW9 859 aa11.58□□□□□ -0.55
PPP4R1-222ENST00000582594 CNPY2Q9Y2B0 182 aa11.58□□□□□ -0.55
PPP4R1-222ENST00000582594 CHL1O00533 1208 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 CHMLP26374 656 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 MCM2P49736 904 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 MTERF4Q7Z6M4 381 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 IL25Q9H293 177 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
PPP4R1-222ENST00000582594 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 PTPRCP08575 1304 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 MX1P20591 662 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 SRCIN1Q9C0H9 1055 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 PNMA6EA0A0J9YXQ4 647 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 PHF14O94880 888 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 SMAP1Q8IYB5 467 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 CCDC94Q9BW85 323 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 CPSF1Q10570 1443 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-222ENST00000582594 FOXO3O43524 673 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 CBX1P83916 185 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 INTS4Q96HW7 963 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 ATP7BP35670 1465 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 CPS1P31327 1500 aa11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 WDR33Q9C0J8 1336 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-222ENST00000582594 FIBPO43427 364 aa11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 GNAI2P04899 355 aa11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-222ENST00000582594 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 SALL3Q9BXA9 1300 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
PPP4R1-222ENST00000582594 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 CPA1P15085 419 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 CCT4P50991 539 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 ANAPC15P60006 121 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 HSP90AB2PQ58FF8 381 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 PPP4R3BQ5MIZ7 849 aa11.53□□□□□ -0.56
PPP4R1-222ENST00000582594 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 KIAA0232Q92628 1395 aa11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.56
PPP4R1-222ENST00000582594 AP5Z1O43299 807 aa11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 ZSCAN22P10073 491 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 PYCARDQ9ULZ3 195 aa11.52□□□□□ -0.57
PPP4R1-222ENST00000582594 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 KDM4AO75164 1064 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 CHMP3Q9Y3E7 222 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 KIF3AQ9Y496 699 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 SYT1P21579 422 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 AK2P54819 239 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 HMGN5P82970 282 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 ATP8B2P98198 1209 aa11.51□□□□□ -0.57
PPP4R1-222ENST00000582594 STX6O43752 255 aa11.5□□□□□ -0.57
PPP4R1-222ENST00000582594 HSPA4P34932 840 aa11.5□□□□□ -0.57
PPP4R1-222ENST00000582594 DDX54Q8TDD1 881 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-222ENST00000582594 RTF1Q92541 710 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-222ENST00000582594 STK31Q9BXU1 1019 aa11.5□□□□□ -0.57
PPP4R1-222ENST00000582594 LARGE1O95461 756 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms