RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-223ENST00000582114 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-223ENST00000582114 SSFA2P28290 1259 aa15.91■□□□□ 0.14
CDK5RAP3-223ENST00000582114 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-223ENST00000582114 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
CDK5RAP3-223ENST00000582114 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
CDK5RAP3-223ENST00000582114 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-223ENST00000582114 GRIN3BO60391 1043 aa15.89■□□□□ 0.13
CDK5RAP3-223ENST00000582114 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
CDK5RAP3-223ENST00000582114 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
CDK5RAP3-223ENST00000582114 SLC4A9Q96Q91 983 aa15.89■□□□□ 0.13
CDK5RAP3-223ENST00000582114 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
CDK5RAP3-223ENST00000582114 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-223ENST00000582114 CABP4P57796 275 aa15.88■□□□□ 0.13
CDK5RAP3-223ENST00000582114 C1orf141Q5JVX7 400 aa15.88■□□□□ 0.13
CDK5RAP3-223ENST00000582114 KDRP35968 1356 aa15.87■□□□□ 0.13
CDK5RAP3-223ENST00000582114 MTHFSP49914 203 aa15.87■□□□□ 0.13
CDK5RAP3-223ENST00000582114 C1QTNF8P60827 252 aa15.87■□□□□ 0.13
CDK5RAP3-223ENST00000582114 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
CDK5RAP3-223ENST00000582114 KIF7Q2M1P5 1343 aa15.87■□□□□ 0.13
CDK5RAP3-223ENST00000582114 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-223ENST00000582114 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-223ENST00000582114 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-223ENST00000582114 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-223ENST00000582114 PLEKHG2Q9H7P9 1386 aa15.86■□□□□ 0.13
CDK5RAP3-223ENST00000582114 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
CDK5RAP3-223ENST00000582114 GIGYF1O75420 1035 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-223ENST00000582114 MMP10P09238 476 aa15.85■□□□□ 0.13
CDK5RAP3-223ENST00000582114 IL13P35225 146 aa15.85■□□□□ 0.13
CDK5RAP3-223ENST00000582114 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
CDK5RAP3-223ENST00000582114 NFATC2IPQ8NCF5 419 aa15.84■□□□□ 0.13
CDK5RAP3-223ENST00000582114 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
CDK5RAP3-223ENST00000582114 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-223ENST00000582114 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-223ENST00000582114 HMOX1P09601 288 aa15.82■□□□□ 0.12
CDK5RAP3-223ENST00000582114 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
CDK5RAP3-223ENST00000582114 CICQ96RK0 1608 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-223ENST00000582114 RFC4P35249 363 aa15.81■□□□□ 0.12
CDK5RAP3-223ENST00000582114 ZNF526Q8TF50 670 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-223ENST00000582114 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
CDK5RAP3-223ENST00000582114 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-223ENST00000582114 ZNF831Q5JPB2 1677 aa15.8■□□□□ 0.12
CDK5RAP3-223ENST00000582114 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
CDK5RAP3-223ENST00000582114 RC3H1Q5TC82 1133 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-223ENST00000582114 GYS1P13807 737 aa15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 CRKLP46109 303 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 N4BP2Q86UW6 1770 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 SCN11AQ9UI33 1791 aa15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 C4AP0C0L4 1744 aa15.79■□□□□ 0.12
CDK5RAP3-223ENST00000582114 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 ADRA2BP18089 450 aa15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-223ENST00000582114 TJP1Q07157 1748 aa15.77■□□□□ 0.12
CDK5RAP3-223ENST00000582114 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-223ENST00000582114 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
CDK5RAP3-223ENST00000582114 PARP3Q9Y6F1 533 aa15.77■□□□□ 0.12
CDK5RAP3-223ENST00000582114 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 DIAPH1O60610 1272 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 GPBP1L1Q9HC44 474 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 KIAA1551Q9HCM1 1747 aa15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 C10orf71Q711Q0 1435 aa15.76■□□□□ 0.11
CDK5RAP3-223ENST00000582114 ADCY9O60503 1353 aa15.75■□□□□ 0.11
CDK5RAP3-223ENST00000582114 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
CDK5RAP3-223ENST00000582114 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-223ENST00000582114 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
CDK5RAP3-223ENST00000582114 DPEP1P16444 411 aa15.74■□□□□ 0.11
CDK5RAP3-223ENST00000582114 TGFB2P61812 414 aa15.74■□□□□ 0.11
CDK5RAP3-223ENST00000582114 FKBP8Q14318 412 aa15.74■□□□□ 0.11
CDK5RAP3-223ENST00000582114 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-223ENST00000582114 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-223ENST00000582114 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-223ENST00000582114 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-223ENST00000582114 MRC1P22897 1456 aa15.71■□□□□ 0.11
CDK5RAP3-223ENST00000582114 FCHSD2O94868 740 aa15.71■□□□□ 0.11
CDK5RAP3-223ENST00000582114 DDR1Q08345 913 aa15.71■□□□□ 0.11
CDK5RAP3-223ENST00000582114 KCPQ6ZWJ8 1503 aa15.7■□□□□ 0.1
CDK5RAP3-223ENST00000582114 USPL1Q5W0Q7 1092 aa15.7■□□□□ 0.1
CDK5RAP3-223ENST00000582114 ARHGAP27Q6ZUM4 889 aa15.7■□□□□ 0.1
CDK5RAP3-223ENST00000582114 COL3A1P02461 1466 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-223ENST00000582114 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-223ENST00000582114 ZPR1O75312 459 aa15.69■□□□□ 0.1
CDK5RAP3-223ENST00000582114 CYP19A1P11511 503 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-223ENST00000582114 ZBTB1Q9Y2K1 713 aa15.69■□□□□ 0.1
CDK5RAP3-223ENST00000582114 ADAMTS7Q9UKP4 1686 aa15.69■□□□□ 0.1
CDK5RAP3-223ENST00000582114 KCNA3P22001 575 aa15.68■□□□□ 0.1
CDK5RAP3-223ENST00000582114 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-223ENST00000582114 COL15A1P39059 1388 aa15.67■□□□□ 0.1
CDK5RAP3-223ENST00000582114 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-223ENST00000582114 CHRNA5P30532 468 aa15.67■□□□□ 0.1
CDK5RAP3-223ENST00000582114 CEP350Q5VT06 3117 aa15.67■□□□□ 0.1
CDK5RAP3-223ENST00000582114 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
CDK5RAP3-223ENST00000582114 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-223ENST00000582114 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms