RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
CSNK1D-220ENST00000581737 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
CSNK1D-220ENST00000581737 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSNK1D-220ENST00000581737 AMOTQ4VCS5 1084 aa17.89■□□□□ 0.45
CSNK1D-220ENST00000581737 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-220ENST00000581737 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-220ENST00000581737 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-220ENST00000581737 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
CSNK1D-220ENST00000581737 FCHSD2O94868 740 aa17.87■□□□□ 0.45
CSNK1D-220ENST00000581737 NEFMP07197 916 aa17.87■□□□□ 0.45
CSNK1D-220ENST00000581737 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
CSNK1D-220ENST00000581737 LY75O60449 1722 aa17.86■□□□□ 0.45
CSNK1D-220ENST00000581737 MSH5O43196 834 aa17.86■□□□□ 0.45
CSNK1D-220ENST00000581737 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
CSNK1D-220ENST00000581737 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
CSNK1D-220ENST00000581737 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
CSNK1D-220ENST00000581737 GRIN3BO60391 1043 aa17.84■□□□□ 0.45
CSNK1D-220ENST00000581737 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
CSNK1D-220ENST00000581737 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
CSNK1D-220ENST00000581737 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-220ENST00000581737 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
CSNK1D-220ENST00000581737 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
CSNK1D-220ENST00000581737 HSP90AB1P08238 724 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-220ENST00000581737 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
CSNK1D-220ENST00000581737 WWC3Q9ULE0 1092 aa17.82■□□□□ 0.44
CSNK1D-220ENST00000581737 KAT6BQ8WYB5 2073 aa17.82■□□□□ 0.44
CSNK1D-220ENST00000581737 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
CSNK1D-220ENST00000581737 CYP27B1O15528 508 aa17.81■□□□□ 0.44
CSNK1D-220ENST00000581737 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-220ENST00000581737 ADCY9O60503 1353 aa17.8■□□□□ 0.44
CSNK1D-220ENST00000581737 PHKG2P15735 406 aa17.8■□□□□ 0.44
CSNK1D-220ENST00000581737 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-220ENST00000581737 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
CSNK1D-220ENST00000581737 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
CSNK1D-220ENST00000581737 AKAP4Q5JQC9 854 aa17.78■□□□□ 0.44
CSNK1D-220ENST00000581737 GPBP1L1Q9HC44 474 aaPredicted RBP17.78■□□□□ 0.44
CSNK1D-220ENST00000581737 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
CSNK1D-220ENST00000581737 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.44
CSNK1D-220ENST00000581737 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
CSNK1D-220ENST00000581737 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
CSNK1D-220ENST00000581737 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
CSNK1D-220ENST00000581737 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
CSNK1D-220ENST00000581737 PALLDQ8WX93 1383 aa17.76■□□□□ 0.43
CSNK1D-220ENST00000581737 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
CSNK1D-220ENST00000581737 TOGARAM1Q9Y4F4 1720 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 C5P01031 1676 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 HSPA6P17066 643 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 ITGB4P16144 1822 aa17.75■□□□□ 0.43
CSNK1D-220ENST00000581737 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
CSNK1D-220ENST00000581737 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
CSNK1D-220ENST00000581737 GNAT3A8MTJ3 354 aa17.73■□□□□ 0.43
CSNK1D-220ENST00000581737 NFE2L2Q16236 605 aa17.73■□□□□ 0.43
CSNK1D-220ENST00000581737 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
CSNK1D-220ENST00000581737 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
CSNK1D-220ENST00000581737 PHF14O94880 888 aa17.72■□□□□ 0.43
CSNK1D-220ENST00000581737 KIF3CO14782 793 aa17.71■□□□□ 0.43
CSNK1D-220ENST00000581737 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-220ENST00000581737 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
CSNK1D-220ENST00000581737 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-220ENST00000581737 MRC1P22897 1456 aa17.7■□□□□ 0.42
CSNK1D-220ENST00000581737 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
CSNK1D-220ENST00000581737 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
CSNK1D-220ENST00000581737 C4BP0C0L5 1744 aa17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 PIGBQ92521 554 aa17.69■□□□□ 0.42
CSNK1D-220ENST00000581737 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-220ENST00000581737 CABP4P57796 275 aa17.68■□□□□ 0.42
CSNK1D-220ENST00000581737 FAM9BQ8IZU0 186 aa17.68■□□□□ 0.42
CSNK1D-220ENST00000581737 AK7Q96M32 723 aa17.68■□□□□ 0.42
CSNK1D-220ENST00000581737 TAF1LQ8IZX4 1826 aa17.68■□□□□ 0.42
CSNK1D-220ENST00000581737 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
CSNK1D-220ENST00000581737 RIPK4P57078 832 aa17.66■□□□□ 0.42
CSNK1D-220ENST00000581737 TEFQ10587 303 aa17.66■□□□□ 0.42
CSNK1D-220ENST00000581737 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
CSNK1D-220ENST00000581737 ITPK1Q13572 414 aa17.65■□□□□ 0.42
CSNK1D-220ENST00000581737 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-220ENST00000581737 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
CSNK1D-220ENST00000581737 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-220ENST00000581737 APAF1O14727 1248 aa17.64■□□□□ 0.41
CSNK1D-220ENST00000581737 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
CSNK1D-220ENST00000581737 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 SIK1P57059 783 aa17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
CSNK1D-220ENST00000581737 SSFA2P28290 1259 aa17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 MCM10Q7L590 875 aa17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 DNAJC5GQ8N7S2 189 aa17.62■□□□□ 0.41
CSNK1D-220ENST00000581737 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms