RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
TVP23C-208ENST00000581273 MRE11P49959 708 aa9.5□□□□□ -0.89
TVP23C-208ENST00000581273 MTERF4Q7Z6M4 381 aaKnown RBP9.5□□□□□ -0.89
TVP23C-208ENST00000581273 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
TVP23C-208ENST00000581273 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
TVP23C-208ENST00000581273 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
TVP23C-208ENST00000581273 ARHGEF28Q8N1W1 1705 aaKnown RBP9.5□□□□□ -0.89
TVP23C-208ENST00000581273 PEAK1Q9H792 1746 aa9.5□□□□□ -0.89
TVP23C-208ENST00000581273 ACEP12821 1306 aa9.5□□□□□ -0.89
TVP23C-208ENST00000581273 SSH2Q76I76 1423 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
TVP23C-208ENST00000581273 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
TVP23C-208ENST00000581273 POLD1P28340 1107 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 TERF1P54274 439 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 CALD1Q05682 793 aaKnown RBP9.49□□□□□ -0.89
TVP23C-208ENST00000581273 AAMPQ13685 434 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 NMRK2Q9NPI5 230 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
TVP23C-208ENST00000581273 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 ATP7BP35670 1465 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 USP19O94966 1318 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 USP47Q96K76 1375 aa9.48□□□□□ -0.89
TVP23C-208ENST00000581273 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
TVP23C-208ENST00000581273 OVOS2A0A0G2JMS6 1433 aa9.47□□□□□ -0.89
TVP23C-208ENST00000581273 OVOS2A0A0J9YW53 1432 aa9.47□□□□□ -0.89
TVP23C-208ENST00000581273 OVOS2Q6IE36 1432 aa9.47□□□□□ -0.89
TVP23C-208ENST00000581273 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.9
TVP23C-208ENST00000581273 ZNF827Q17R98 1081 aa9.46□□□□□ -0.9
TVP23C-208ENST00000581273 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
TVP23C-208ENST00000581273 TRIM44Q96DX7 344 aaPredicted RBP9.46□□□□□ -0.9
TVP23C-208ENST00000581273 ABHD8Q96I13 439 aa9.46□□□□□ -0.9
TVP23C-208ENST00000581273 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
TVP23C-208ENST00000581273 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
TVP23C-208ENST00000581273 PDE4DIPQ5VU43 2346 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
TVP23C-208ENST00000581273 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 GCP02774 474 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 PYGBP11216 843 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 TSPYL2Q9H2G4 693 aaPredicted RBP9.45□□□□□ -0.9
TVP23C-208ENST00000581273 LMO7Q8WWI1 1683 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
TVP23C-208ENST00000581273 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 FOXN1O15353 648 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 SOX12O15370 315 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 DDB1Q16531 1140 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 TOM1L2Q6ZVM7 507 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 CRBNQ96SW2 442 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 THRAP3Q9Y2W1 955 aaKnown RBP9.44□□□□□ -0.9
TVP23C-208ENST00000581273 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
TVP23C-208ENST00000581273 RGPD5Q99666 1765 aa9.44□□□□□ -0.9
TVP23C-208ENST00000581273 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
TVP23C-208ENST00000581273 CPDO75976 1380 aa9.43□□□□□ -0.9
TVP23C-208ENST00000581273 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
TVP23C-208ENST00000581273 RGS19P49795 217 aa9.43□□□□□ -0.9
TVP23C-208ENST00000581273 NLRP6P59044 892 aa9.43□□□□□ -0.9
TVP23C-208ENST00000581273 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
TVP23C-208ENST00000581273 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
TVP23C-208ENST00000581273 PAPPAQ13219 1627 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 COL5A2P05997 1499 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-208ENST00000581273 CRB1P82279 1406 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 PPIP5K1Q6PFW1 1433 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 ESPNB1AK53 854 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 FSTL1Q12841 308 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 SKOR2Q2VWA4 1001 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-208ENST00000581273 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
TVP23C-208ENST00000581273 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-208ENST00000581273 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
TVP23C-208ENST00000581273 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.41□□□□□ -0.9
TVP23C-208ENST00000581273 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
TVP23C-208ENST00000581273 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
TVP23C-208ENST00000581273 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
TVP23C-208ENST00000581273 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
TVP23C-208ENST00000581273 MARCH10Q8NA82 808 aaPredicted RBP9.4□□□□□ -0.9
TVP23C-208ENST00000581273 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
TVP23C-208ENST00000581273 WNK3Q9BYP7 1800 aa9.4□□□□□ -0.91
TVP23C-208ENST00000581273 QRICH2Q9H0J4 1663 aa9.39□□□□□ -0.91
TVP23C-208ENST00000581273 CGNL1Q0VF96 1302 aa9.39□□□□□ -0.91
TVP23C-208ENST00000581273 XRCC6P12956 609 aaKnown RBP eCLIP9.39□□□□□ -0.914e-8■■■■■ 31.9
TVP23C-208ENST00000581273 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
TVP23C-208ENST00000581273 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
TVP23C-208ENST00000581273 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 PNPLA7Q6ZV29 1317 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 COL18A1P39060 1754 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 MCM4P33991 863 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
TVP23C-208ENST00000581273 POLR3GLQ9BT43 218 aa9.38□□□□□ -0.91
TVP23C-208ENST00000581273 WDR17Q8IZU2 1322 aa9.37□□□□□ -0.91
TVP23C-208ENST00000581273 EXOC5O00471 708 aa9.37□□□□□ -0.91
TVP23C-208ENST00000581273 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
TVP23C-208ENST00000581273 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
TVP23C-208ENST00000581273 HS1BP3Q53T59 392 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms