RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 GPR162Q16538 588 aa11.66□□□□□ -0.54
SUPT4H1-206ENST00000581204 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
SUPT4H1-206ENST00000581204 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
SUPT4H1-206ENST00000581204 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
SUPT4H1-206ENST00000581204 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-206ENST00000581204 TCP11L2Q8N4U5 519 aa11.65□□□□□ -0.54
SUPT4H1-206ENST00000581204 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
SUPT4H1-206ENST00000581204 POLR3GLQ9BT43 218 aa11.65□□□□□ -0.54
SUPT4H1-206ENST00000581204 ADCY9O60503 1353 aa11.64□□□□□ -0.55
SUPT4H1-206ENST00000581204 AATKQ6ZMQ8 1374 aa11.64□□□□□ -0.55
SUPT4H1-206ENST00000581204 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
SUPT4H1-206ENST00000581204 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 BCL9O00512 1426 aa11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 C11orf95C9JLR9 678 aaPredicted RBP11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
SUPT4H1-206ENST00000581204 COL13A1Q5TAT6 717 aaPredicted RBP11.62□□□□□ -0.55
SUPT4H1-206ENST00000581204 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
SUPT4H1-206ENST00000581204 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
SUPT4H1-206ENST00000581204 WNK3Q9BYP7 1800 aa11.62□□□□□ -0.55
SUPT4H1-206ENST00000581204 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.558e-11■■■■■ 40.1
SUPT4H1-206ENST00000581204 TMF1P82094 1093 aa11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 COL5A2P05997 1499 aaPredicted RBP11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
SUPT4H1-206ENST00000581204 TULP4Q9NRJ4 1543 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 EVI5O60447 810 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 PRELPP51888 382 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
SUPT4H1-206ENST00000581204 CPDO75976 1380 aa11.59□□□□□ -0.55
SUPT4H1-206ENST00000581204 TESK2Q96S53 571 aa11.59□□□□□ -0.55
SUPT4H1-206ENST00000581204 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
SUPT4H1-206ENST00000581204 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
SUPT4H1-206ENST00000581204 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
SUPT4H1-206ENST00000581204 PRAM1Q96QH2 718 aa11.58□□□□□ -0.56
SUPT4H1-206ENST00000581204 AKAP12Q02952 1782 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 OSBPP22059 807 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 EVA1CP58658 441 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 SAFB2Q14151 953 aaKnown RBP eCLIP11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 POGKQ9P215 609 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 CRB1P82279 1406 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
SUPT4H1-206ENST00000581204 QRICH2Q9H0J4 1663 aa11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 GPR37O15354 613 aa11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 FCHSD2O94868 740 aa11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 ZNF827Q17R98 1081 aa11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 ARHGEF28Q8N1W1 1705 aaKnown RBP11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 MARCH10Q8NA82 808 aaPredicted RBP11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
SUPT4H1-206ENST00000581204 HIC1Q14526 733 aa11.55□□□□□ -0.56
SUPT4H1-206ENST00000581204 DDX12PQ92771 950 aa11.55□□□□□ -0.56
SUPT4H1-206ENST00000581204 NHSQ6T4R5 1651 aa11.55□□□□□ -0.56
SUPT4H1-206ENST00000581204 ANP32CO43423 234 aa11.54□□□□□ -0.56
SUPT4H1-206ENST00000581204 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
SUPT4H1-206ENST00000581204 USP19O94966 1318 aa11.54□□□□□ -0.56
SUPT4H1-206ENST00000581204 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 APLP1P51693 650 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 EPAS1Q99814 870 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
SUPT4H1-206ENST00000581204 ITSN1Q15811 1721 aa11.52□□□□□ -0.56
SUPT4H1-206ENST00000581204 WDR90Q96KV7 1748 aa11.52□□□□□ -0.56
SUPT4H1-206ENST00000581204 TRIM66O15016 1216 aa11.52□□□□□ -0.57
SUPT4H1-206ENST00000581204 GNPATO15228 680 aa11.52□□□□□ -0.57
SUPT4H1-206ENST00000581204 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
SUPT4H1-206ENST00000581204 DDB1Q16531 1140 aa11.52□□□□□ -0.57
SUPT4H1-206ENST00000581204 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
SUPT4H1-206ENST00000581204 PCNTO95613 3336 aa11.51□□□□□ -0.57
SUPT4H1-206ENST00000581204 NGDNQ8NEJ9 315 aaKnown RBP11.51□□□□□ -0.57
SUPT4H1-206ENST00000581204 ZNF526Q8TF50 670 aaPredicted RBP11.51□□□□□ -0.57
SUPT4H1-206ENST00000581204 EVC2Q86UK5 1308 aa11.51□□□□□ -0.57
SUPT4H1-206ENST00000581204 COL18A1P39060 1754 aa11.5□□□□□ -0.57
SUPT4H1-206ENST00000581204 JMYQ8N9B5 988 aa11.5□□□□□ -0.57
SUPT4H1-206ENST00000581204 PHF14O94880 888 aa11.49□□□□□ -0.57
SUPT4H1-206ENST00000581204 PDE4DQ08499 809 aa11.49□□□□□ -0.57
SUPT4H1-206ENST00000581204 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
SUPT4H1-206ENST00000581204 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
SUPT4H1-206ENST00000581204 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
SUPT4H1-206ENST00000581204 LRRC4BQ9NT99 713 aa11.48□□□□□ -0.57
SUPT4H1-206ENST00000581204 PNPLA7Q6ZV29 1317 aa11.48□□□□□ -0.57
SUPT4H1-206ENST00000581204 BTAF1O14981 1849 aa11.48□□□□□ -0.57
SUPT4H1-206ENST00000581204 IRF6O14896 467 aa11.47□□□□□ -0.57
SUPT4H1-206ENST00000581204 POLD1P28340 1107 aa11.47□□□□□ -0.57
SUPT4H1-206ENST00000581204 SRPK2P78362 688 aaKnown RBP11.47□□□□□ -0.57
SUPT4H1-206ENST00000581204 PANK3Q9H999 370 aa11.47□□□□□ -0.57
SUPT4H1-206ENST00000581204 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
SUPT4H1-206ENST00000581204 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
SUPT4H1-206ENST00000581204 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
SUPT4H1-206ENST00000581204 SLIT3O75094 1523 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms