RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 YY1P25490 414 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 ATP6V1AP38606 617 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 ITPK1Q13572 414 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 MSL1Q68DK7 614 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 SMIM5Q71RC9 77 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 UBR3Q6ZT12 1888 aa28.88■■■□□ 2.21
CSNK1D-215ENST00000580784 C1orf141Q5JVX7 400 aa28.87■■■□□ 2.21
CSNK1D-215ENST00000580784 CABP4P57796 275 aa28.85■■■□□ 2.21
CSNK1D-215ENST00000580784 NPC1L1Q9UHC9 1359 aa28.85■■■□□ 2.21
CSNK1D-215ENST00000580784 UTRNP46939 3433 aa28.85■■■□□ 2.21
CSNK1D-215ENST00000580784 PHF14O94880 888 aa28.84■■■□□ 2.21
CSNK1D-215ENST00000580784 HMOX1P09601 288 aa28.84■■■□□ 2.21
CSNK1D-215ENST00000580784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.83■■■□□ 2.21
CSNK1D-215ENST00000580784 DIAPH1O60610 1272 aaKnown RBP28.83■■■□□ 2.21
CSNK1D-215ENST00000580784 SLC4A9Q96Q91 983 aa28.82■■■□□ 2.2
CSNK1D-215ENST00000580784 RBM42Q9BTD8 480 aaKnown RBP28.82■■■□□ 2.2
CSNK1D-215ENST00000580784 NFATC2IPQ8NCF5 419 aa28.8■■■□□ 2.2
CSNK1D-215ENST00000580784 GNPATO15228 680 aa28.79■■■□□ 2.2
CSNK1D-215ENST00000580784 SSFA2P28290 1259 aa28.79■■■□□ 2.2
CSNK1D-215ENST00000580784 NLGN2Q8NFZ4 835 aa28.79■■■□□ 2.2
CSNK1D-215ENST00000580784 SCN11AQ9UI33 1791 aa28.79■■■□□ 2.2
CSNK1D-215ENST00000580784 AKAP4Q5JQC9 854 aa28.77■■■□□ 2.2
CSNK1D-215ENST00000580784 ZNF831Q5JPB2 1677 aa28.77■■■□□ 2.2
CSNK1D-215ENST00000580784 GPR162Q16538 588 aa28.75■■■□□ 2.19
CSNK1D-215ENST00000580784 COL3A1P02461 1466 aaPredicted RBP28.74■■■□□ 2.19
CSNK1D-215ENST00000580784 PTCD1O75127 700 aaKnown RBP28.74■■■□□ 2.19
CSNK1D-215ENST00000580784 LGR6Q9HBX8 967 aa28.74■■■□□ 2.19
CSNK1D-215ENST00000580784 VIRMAQ69YN4 1812 aaKnown RBP28.73■■■□□ 2.19
CSNK1D-215ENST00000580784 CHD4Q14839 1912 aa28.73■■■□□ 2.19
CSNK1D-215ENST00000580784 COL5A3P25940 1745 aaPredicted RBP28.73■■■□□ 2.19
CSNK1D-215ENST00000580784 MTHFSDQ2M296 383 aaKnown RBP28.73■■■□□ 2.19
CSNK1D-215ENST00000580784 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
CSNK1D-215ENST00000580784 GOLGB1Q14789 3259 aaKnown RBP28.72■■■□□ 2.19
CSNK1D-215ENST00000580784 U2SURPO15042 1029 aaKnown RBP28.71■■■□□ 2.19
CSNK1D-215ENST00000580784 MYH14Q7Z406 1995 aaKnown RBP28.7■■■□□ 2.19
CSNK1D-215ENST00000580784 RC3H1Q5TC82 1133 aaKnown RBP28.7■■■□□ 2.18
CSNK1D-215ENST00000580784 RTCBQ9Y3I0 505 aaKnown RBP28.7■■■□□ 2.18
CSNK1D-215ENST00000580784 RNMTO43148 476 aaKnown RBP28.69■■■□□ 2.18
CSNK1D-215ENST00000580784 SLC52A2Q9HAB3 445 aa28.69■■■□□ 2.18
CSNK1D-215ENST00000580784 TRAPPC3LQ5T215 181 aa28.68■■■□□ 2.18
CSNK1D-215ENST00000580784 CD2APQ9Y5K6 639 aa28.68■■■□□ 2.18
CSNK1D-215ENST00000580784 CNTNAP4Q9C0A0 1308 aa28.67■■■□□ 2.18
CSNK1D-215ENST00000580784 RPS6KA4O75676 772 aa28.65■■■□□ 2.18
CSNK1D-215ENST00000580784 ARHGEF1Q92888 912 aaKnown RBP28.65■■■□□ 2.18
CSNK1D-215ENST00000580784 TJP1Q07157 1748 aa28.63■■■□□ 2.17
CSNK1D-215ENST00000580784 ADAMTS7Q9UKP4 1686 aa28.63■■■□□ 2.17
CSNK1D-215ENST00000580784 MRC1P22897 1456 aa28.62■■■□□ 2.17
CSNK1D-215ENST00000580784 YBX3P16989 372 aaKnown RBP eCLIP28.62■■■□□ 2.172e-6■□□□□ 10.5
CSNK1D-215ENST00000580784 PPP2R1AP30153 589 aa28.62■■■□□ 2.17
CSNK1D-215ENST00000580784 CRKLP46109 303 aaKnown RBP28.62■■■□□ 2.17
CSNK1D-215ENST00000580784 SLC39A6Q13433 755 aa28.62■■■□□ 2.17
CSNK1D-215ENST00000580784 CFAP53Q96M91 514 aa28.62■■■□□ 2.17
CSNK1D-215ENST00000580784 ADRA2BP18089 450 aa28.61■■■□□ 2.17
CSNK1D-215ENST00000580784 MMP10P09238 476 aa28.6■■■□□ 2.17
CSNK1D-215ENST00000580784 RFC4P35249 363 aa28.6■■■□□ 2.17
CSNK1D-215ENST00000580784 CICQ96RK0 1608 aaPredicted RBP28.58■■■□□ 2.17
CSNK1D-215ENST00000580784 DNAJC10Q8IXB1 793 aa28.58■■■□□ 2.17
CSNK1D-215ENST00000580784 NLGN1Q8N2Q7 840 aa28.58■■■□□ 2.17
CSNK1D-215ENST00000580784 ZNF784Q8NCA9 323 aaPredicted RBP28.58■■■□□ 2.17
CSNK1D-215ENST00000580784 C4AP0C0L4 1744 aa28.57■■■□□ 2.16
CSNK1D-215ENST00000580784 GYS1P13807 737 aa28.57■■■□□ 2.16
CSNK1D-215ENST00000580784 INTS5Q6P9B9 1019 aaKnown RBP28.57■■■□□ 2.16
CSNK1D-215ENST00000580784 GAS2L2Q8NHY3 880 aa28.57■■■□□ 2.16
CSNK1D-215ENST00000580784 GNAT3A8MTJ3 354 aa28.56■■■□□ 2.16
CSNK1D-215ENST00000580784 GRIN3BO60391 1043 aa28.56■■■□□ 2.16
CSNK1D-215ENST00000580784 IL17REQ8NFR9 667 aa28.56■■■□□ 2.16
CSNK1D-215ENST00000580784 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
CSNK1D-215ENST00000580784 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
CSNK1D-215ENST00000580784 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
CSNK1D-215ENST00000580784 KCPQ6ZWJ8 1503 aa28.54■■■□□ 2.16
CSNK1D-215ENST00000580784 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
CSNK1D-215ENST00000580784 CCDC87Q9NVE4 849 aa28.52■■■□□ 2.16
CSNK1D-215ENST00000580784 SRP68Q9UHB9 627 aaKnown RBP28.52■■■□□ 2.16
CSNK1D-215ENST00000580784 WWC3Q9ULE0 1092 aa28.52■■■□□ 2.16
CSNK1D-215ENST00000580784 U2AF1L5P0DN76 240 aaPredicted RBP28.51■■■□□ 2.15
CSNK1D-215ENST00000580784 CYP19A1P11511 503 aaPredicted RBP28.51■■■□□ 2.15
CSNK1D-215ENST00000580784 U2AF1Q01081 240 aaKnown RBP eCLIP28.51■■■□□ 2.156e-7■□□□□ 10.7
CSNK1D-215ENST00000580784 TEFQ10587 303 aa28.51■■■□□ 2.15
CSNK1D-215ENST00000580784 UBR2Q8IWV8 1755 aa28.5■■■□□ 2.15
CSNK1D-215ENST00000580784 KIF13BQ9NQT8 1826 aa28.49■■■□□ 2.15
CSNK1D-215ENST00000580784 SIPA1L3O60292 1781 aaPredicted RBP28.49■■■□□ 2.15
CSNK1D-215ENST00000580784 USP42Q9H9J4 1324 aaKnown RBP28.48■■■□□ 2.15
CSNK1D-215ENST00000580784 VSIG10Q8N0Z9 540 aa28.48■■■□□ 2.15
CSNK1D-215ENST00000580784 FKBP8Q14318 412 aa28.47■■■□□ 2.15
CSNK1D-215ENST00000580784 TTC5Q8N0Z6 440 aa28.47■■■□□ 2.15
CSNK1D-215ENST00000580784 PARP3Q9Y6F1 533 aa28.47■■■□□ 2.15
CSNK1D-215ENST00000580784 FCHSD2O94868 740 aa28.46■■■□□ 2.15
CSNK1D-215ENST00000580784 SOS1Q07889 1333 aaPredicted RBP28.45■■■□□ 2.15
CSNK1D-215ENST00000580784 N4BP2Q86UW6 1770 aaPredicted RBP28.45■■■□□ 2.15
CSNK1D-215ENST00000580784 ZNF790Q6PG37 636 aa28.45■■■□□ 2.14
CSNK1D-215ENST00000580784 ZNF496Q96IT1 587 aaPredicted RBP28.44■■■□□ 2.14
CSNK1D-215ENST00000580784 ZBTB1Q9Y2K1 713 aa28.44■■■□□ 2.14
CSNK1D-215ENST00000580784 CEMIPQ8WUJ3 1361 aa28.44■■■□□ 2.14
CSNK1D-215ENST00000580784 KIAA1551Q9HCM1 1747 aa28.43■■■□□ 2.14
CSNK1D-215ENST00000580784 C10orf71Q711Q0 1435 aa28.43■■■□□ 2.14
CSNK1D-215ENST00000580784 PXDNLA1KZ92 1463 aa28.42■■■□□ 2.14
CSNK1D-215ENST00000580784 A0A0G2JLW4 131 aa28.42■■■□□ 2.14
CSNK1D-215ENST00000580784 ZPR1O75312 459 aa28.42■■■□□ 2.14
CSNK1D-215ENST00000580784 TGFB2P61812 414 aa28.42■■■□□ 2.14
CSNK1D-215ENST00000580784 USPL1Q5W0Q7 1092 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms