RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
CCDC84-209ENST00000580556 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 EYA1Q99502 592 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 C5P01031 1676 aa16.18■□□□□ 0.18
CCDC84-209ENST00000580556 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
CCDC84-209ENST00000580556 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
CCDC84-209ENST00000580556 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
CCDC84-209ENST00000580556 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC84-209ENST00000580556 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CCDC84-209ENST00000580556 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
CCDC84-209ENST00000580556 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCDC84-209ENST00000580556 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
CCDC84-209ENST00000580556 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
CCDC84-209ENST00000580556 FCHSD2O94868 740 aa16.13■□□□□ 0.17
CCDC84-209ENST00000580556 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
CCDC84-209ENST00000580556 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
CCDC84-209ENST00000580556 AEBP1Q8IUX7 1158 aa16.12■□□□□ 0.17
CCDC84-209ENST00000580556 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
CCDC84-209ENST00000580556 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
CCDC84-209ENST00000580556 PHF14O94880 888 aa16.11■□□□□ 0.17
CCDC84-209ENST00000580556 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
CCDC84-209ENST00000580556 PALLDQ8WX93 1383 aa16.11■□□□□ 0.17
CCDC84-209ENST00000580556 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
CCDC84-209ENST00000580556 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
CCDC84-209ENST00000580556 HMOX1P09601 288 aa16.1■□□□□ 0.17
CCDC84-209ENST00000580556 APLP1P51693 650 aa16.1■□□□□ 0.17
CCDC84-209ENST00000580556 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
CCDC84-209ENST00000580556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■□□□ 11.6
CCDC84-209ENST00000580556 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
CCDC84-209ENST00000580556 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
CCDC84-209ENST00000580556 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
CCDC84-209ENST00000580556 UBR3Q6ZT12 1888 aa16.09■□□□□ 0.17
CCDC84-209ENST00000580556 HTRA3P83110 453 aa16.08■□□□□ 0.16
CCDC84-209ENST00000580556 AK7Q96M32 723 aa16.08■□□□□ 0.16
CCDC84-209ENST00000580556 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
CCDC84-209ENST00000580556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
CCDC84-209ENST00000580556 PRKAR2BP31323 418 aa16.07■□□□□ 0.16
CCDC84-209ENST00000580556 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
CCDC84-209ENST00000580556 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CCDC84-209ENST00000580556 CAPN15O75808 1086 aa16.06■□□□□ 0.16
CCDC84-209ENST00000580556 TOMM70O94826 608 aa16.06■□□□□ 0.16
CCDC84-209ENST00000580556 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
CCDC84-209ENST00000580556 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
CCDC84-209ENST00000580556 NMRK2Q9NPI5 230 aa16.06■□□□□ 0.16
CCDC84-209ENST00000580556 ITGB4P16144 1822 aa16.05■□□□□ 0.16
CCDC84-209ENST00000580556 NEFMP07197 916 aa16.05■□□□□ 0.16
CCDC84-209ENST00000580556 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
CCDC84-209ENST00000580556 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
CCDC84-209ENST00000580556 CYP27B1O15528 508 aa16.04■□□□□ 0.16
CCDC84-209ENST00000580556 PLEKHO1Q53GL0 409 aaPredicted RBP16.04■□□□□ 0.16
CCDC84-209ENST00000580556 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
CCDC84-209ENST00000580556 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
CCDC84-209ENST00000580556 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
CCDC84-209ENST00000580556 KIAA1551Q9HCM1 1747 aa16.04■□□□□ 0.16
CCDC84-209ENST00000580556 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
CCDC84-209ENST00000580556 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
CCDC84-209ENST00000580556 FAM9BQ8IZU0 186 aa16.03■□□□□ 0.16
CCDC84-209ENST00000580556 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
CCDC84-209ENST00000580556 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
CCDC84-209ENST00000580556 PIGBQ92521 554 aa16.02■□□□□ 0.16
CCDC84-209ENST00000580556 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
CCDC84-209ENST00000580556 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
CCDC84-209ENST00000580556 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
CCDC84-209ENST00000580556 A0A0G2JLW4 131 aa16■□□□□ 0.15
CCDC84-209ENST00000580556 MMP10P09238 476 aa16■□□□□ 0.15
CCDC84-209ENST00000580556 SSFA2P28290 1259 aa16■□□□□ 0.15
CCDC84-209ENST00000580556 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
CCDC84-209ENST00000580556 SMARCC1Q92922 1105 aaPredicted RBP16■□□□□ 0.15
CCDC84-209ENST00000580556 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 KIF13BQ9NQT8 1826 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 ITPK1Q13572 414 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 NFE2L2Q16236 605 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
CCDC84-209ENST00000580556 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
CCDC84-209ENST00000580556 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
CCDC84-209ENST00000580556 GNPATO15228 680 aa15.98■□□□□ 0.15
CCDC84-209ENST00000580556 HSP90AB1P08238 724 aaKnown RBP15.98■□□□□ 0.15
CCDC84-209ENST00000580556 PHKG2P15735 406 aa15.98■□□□□ 0.15
CCDC84-209ENST00000580556 SIK1P57059 783 aa15.98■□□□□ 0.15
CCDC84-209ENST00000580556 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
CCDC84-209ENST00000580556 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
CCDC84-209ENST00000580556 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
CCDC84-209ENST00000580556 TMPOP42166 694 aaKnown RBP15.97■□□□□ 0.15
CCDC84-209ENST00000580556 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
CCDC84-209ENST00000580556 DPEP1P16444 411 aa15.96■□□□□ 0.15
CCDC84-209ENST00000580556 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
CCDC84-209ENST00000580556 JMYQ8N9B5 988 aa15.96■□□□□ 0.15
CCDC84-209ENST00000580556 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
CCDC84-209ENST00000580556 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.15
CCDC84-209ENST00000580556 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
CCDC84-209ENST00000580556 APAF1O14727 1248 aa15.95■□□□□ 0.14
CCDC84-209ENST00000580556 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
CCDC84-209ENST00000580556 TNS4Q8IZW8 715 aa15.95■□□□□ 0.14
CCDC84-209ENST00000580556 PCNTO95613 3336 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 TGFB2P61812 414 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms