RNA–Protein interactions for RNA: ENST00000580461.5

EIF4A1-214, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-214ENST00000580461 PRELPP51888 382 aa17.15■□□□□ 0.34
EIF4A1-214ENST00000580461 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.341e-10■■■■□ 21.4
EIF4A1-214ENST00000580461 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
EIF4A1-214ENST00000580461 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
EIF4A1-214ENST00000580461 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
EIF4A1-214ENST00000580461 FCHSD2O94868 740 aa17.14■□□□□ 0.33
EIF4A1-214ENST00000580461 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
EIF4A1-214ENST00000580461 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
EIF4A1-214ENST00000580461 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
EIF4A1-214ENST00000580461 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
EIF4A1-214ENST00000580461 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
EIF4A1-214ENST00000580461 C5P01031 1676 aa17.13■□□□□ 0.33
EIF4A1-214ENST00000580461 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
EIF4A1-214ENST00000580461 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
EIF4A1-214ENST00000580461 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
EIF4A1-214ENST00000580461 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
EIF4A1-214ENST00000580461 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
EIF4A1-214ENST00000580461 SLC34A2O95436 690 aa17.1■□□□□ 0.33
EIF4A1-214ENST00000580461 HMOX1P09601 288 aa17.1■□□□□ 0.33
EIF4A1-214ENST00000580461 HTRA3P83110 453 aa17.1■□□□□ 0.33
EIF4A1-214ENST00000580461 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
EIF4A1-214ENST00000580461 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
EIF4A1-214ENST00000580461 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
EIF4A1-214ENST00000580461 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
EIF4A1-214ENST00000580461 KDRP35968 1356 aa17.09■□□□□ 0.33
EIF4A1-214ENST00000580461 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
EIF4A1-214ENST00000580461 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.32
EIF4A1-214ENST00000580461 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
EIF4A1-214ENST00000580461 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
EIF4A1-214ENST00000580461 WWC3Q9ULE0 1092 aa17.07■□□□□ 0.32
EIF4A1-214ENST00000580461 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
EIF4A1-214ENST00000580461 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
EIF4A1-214ENST00000580461 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
EIF4A1-214ENST00000580461 TOMM70O94826 608 aa17.05■□□□□ 0.32
EIF4A1-214ENST00000580461 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
EIF4A1-214ENST00000580461 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
EIF4A1-214ENST00000580461 UBR3Q6ZT12 1888 aa17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 PRKAR2BP31323 418 aa17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 MEGF6O75095 1541 aa17.04■□□□□ 0.32
EIF4A1-214ENST00000580461 KIF13BQ9NQT8 1826 aa17.03■□□□□ 0.32
EIF4A1-214ENST00000580461 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
EIF4A1-214ENST00000580461 PHKG2P15735 406 aa17.03■□□□□ 0.32
EIF4A1-214ENST00000580461 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
EIF4A1-214ENST00000580461 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
EIF4A1-214ENST00000580461 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.32
EIF4A1-214ENST00000580461 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.32
EIF4A1-214ENST00000580461 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 CYP27B1O15528 508 aa17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 MSH5O43196 834 aa17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
EIF4A1-214ENST00000580461 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
EIF4A1-214ENST00000580461 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 CABP4P57796 275 aa16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 C4BP0C0L5 1744 aa16.99■□□□□ 0.31
EIF4A1-214ENST00000580461 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
EIF4A1-214ENST00000580461 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
EIF4A1-214ENST00000580461 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
EIF4A1-214ENST00000580461 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
EIF4A1-214ENST00000580461 AMIGO3Q86WK7 504 aa16.97■□□□□ 0.31
EIF4A1-214ENST00000580461 TEFQ10587 303 aa16.96■□□□□ 0.31
EIF4A1-214ENST00000580461 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
EIF4A1-214ENST00000580461 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
EIF4A1-214ENST00000580461 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
EIF4A1-214ENST00000580461 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 TNRC6CQ9HCJ0 1690 aaKnown RBP16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
EIF4A1-214ENST00000580461 ITGB4P16144 1822 aa16.92■□□□□ 0.3
EIF4A1-214ENST00000580461 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
EIF4A1-214ENST00000580461 RIPK4P57078 832 aa16.91■□□□□ 0.3
EIF4A1-214ENST00000580461 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
EIF4A1-214ENST00000580461 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
EIF4A1-214ENST00000580461 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
EIF4A1-214ENST00000580461 SBF1O95248 1867 aa16.9■□□□□ 0.3
EIF4A1-214ENST00000580461 HSPA1AP0DMV8 641 aaKnown RBP16.9■□□□□ 0.3
EIF4A1-214ENST00000580461 HSPA1BP0DMV9 641 aaKnown RBP16.9■□□□□ 0.3
EIF4A1-214ENST00000580461 SMIM5Q71RC9 77 aa16.9■□□□□ 0.3
EIF4A1-214ENST00000580461 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
EIF4A1-214ENST00000580461 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
EIF4A1-214ENST00000580461 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
EIF4A1-214ENST00000580461 PIGBQ92521 554 aa16.89■□□□□ 0.29
EIF4A1-214ENST00000580461 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
EIF4A1-214ENST00000580461 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
EIF4A1-214ENST00000580461 FSTL1Q12841 308 aa16.88■□□□□ 0.29
EIF4A1-214ENST00000580461 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
EIF4A1-214ENST00000580461 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
EIF4A1-214ENST00000580461 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms