RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	ZNF831	Q5JPB2	1677 aa		29.28	■■■□□ 2.28
ACADVL-223	ENST00000580263	ITPK1	Q13572	414 aa		29.27	■■■□□ 2.28
ACADVL-223	ENST00000580263	COL23A1	Q86Y22	540 aa	Predicted RBP	29.27	■■■□□ 2.28
ACADVL-223	ENST00000580263	LINC00116	Q8NCU8	138 aa		29.27	■■■□□ 2.28
ACADVL-223	ENST00000580263	COL5A3	P25940	1745 aa	Predicted RBP	29.26	■■■□□ 2.27
ACADVL-223	ENST00000580263	ATP6V1A	P38606	617 aa		29.26	■■■□□ 2.27
ACADVL-223	ENST00000580263	NFATC2IP	Q8NCF5	419 aa		29.26	■■■□□ 2.27
ACADVL-223	ENST00000580263	SLC16A10	Q8TF71	515 aa		29.26	■■■□□ 2.27
ACADVL-223	ENST00000580263	LGR6	Q9HBX8	967 aa		29.26	■■■□□ 2.27
ACADVL-223	ENST00000580263	MRC1	P22897	1456 aa		29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	MSH5	O43196	834 aa		29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	DDX10	Q13206	875 aa	Known RBP	29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	AMIGO3	Q86WK7	504 aa		29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	AK7	Q96M32	723 aa		29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	SLC4A9	Q96Q91	983 aa		29.24	■■■□□ 2.27
ACADVL-223	ENST00000580263	HMGB2	P26583	209 aa	Known RBP	29.23	■■■□□ 2.27
ACADVL-223	ENST00000580263	RBM42	Q9BTD8	480 aa	Known RBP	29.23	■■■□□ 2.27
ACADVL-223	ENST00000580263	RNMT	O43148	476 aa	Known RBP	29.22	■■■□□ 2.27
ACADVL-223	ENST00000580263	SMIM5	Q71RC9	77 aa		29.22	■■■□□ 2.27
ACADVL-223	ENST00000580263	RSPH6A	Q9H0K4	717 aa		29.21	■■■□□ 2.27
ACADVL-223	ENST00000580263	NUDC	Q9Y266	331 aa		29.21	■■■□□ 2.27
ACADVL-223	ENST00000580263	MYH14	Q7Z406	1995 aa	Known RBP	29.21	■■■□□ 2.27
ACADVL-223	ENST00000580263	TJP1	Q07157	1748 aa		29.2	■■■□□ 2.27
ACADVL-223	ENST00000580263	PRKAR2B	P31323	418 aa		29.2	■■■□□ 2.26
ACADVL-223	ENST00000580263	SLC52A2	Q9HAB3	445 aa		29.2	■■■□□ 2.26
ACADVL-223	ENST00000580263	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.19	■■■□□ 2.26
ACADVL-223	ENST00000580263	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
ACADVL-223	ENST00000580263	ARX	Q96QS3	562 aa		29.19	■■■□□ 2.26
ACADVL-223	ENST00000580263	PHF14	O94880	888 aa		29.18	■■■□□ 2.26
ACADVL-223	ENST00000580263	FHDC1	Q9C0D6	1143 aa	Predicted RBP	29.18	■■■□□ 2.26
ACADVL-223	ENST00000580263	SIPA1L3	O60292	1781 aa	Predicted RBP	29.17	■■■□□ 2.26
ACADVL-223	ENST00000580263	PTCD1	O75127	700 aa	Known RBP	29.17	■■■□□ 2.26
ACADVL-223	ENST00000580263	GAS2L2	Q8NHY3	880 aa		29.17	■■■□□ 2.26
ACADVL-223	ENST00000580263	PHACTR3	Q96KR7	559 aa		29.17	■■■□□ 2.26
ACADVL-223	ENST00000580263	CIC	Q96RK0	1608 aa	Predicted RBP	29.16	■■■□□ 2.26
ACADVL-223	ENST00000580263	MAP3K5	Q99683	1374 aa		29.16	■■■□□ 2.26
ACADVL-223	ENST00000580263	MSL1	Q68DK7	614 aa		29.16	■■■□□ 2.26
ACADVL-223	ENST00000580263	FLAD1	Q8NFF5	587 aa		29.16	■■■□□ 2.26
ACADVL-223	ENST00000580263	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.15	■■■□□ 2.26
ACADVL-223	ENST00000580263	GNPAT	O15228	680 aa		29.15	■■■□□ 2.26
ACADVL-223	ENST00000580263	POLD1	P28340	1107 aa		29.14	■■■□□ 2.26
ACADVL-223	ENST00000580263	UBR2	Q8IWV8	1755 aa		29.13	■■■□□ 2.25
ACADVL-223	ENST00000580263	SYT17	Q9BSW7	474 aa		29.13	■■■□□ 2.25
ACADVL-223	ENST00000580263	GNAT3	A8MTJ3	354 aa		29.12	■■■□□ 2.25
ACADVL-223	ENST00000580263	SSFA2	P28290	1259 aa		29.12	■■■□□ 2.25
ACADVL-223	ENST00000580263	SLC39A6	Q13433	755 aa		29.12	■■■□□ 2.25
ACADVL-223	ENST00000580263	KCP	Q6ZWJ8	1503 aa		29.11	■■■□□ 2.25
ACADVL-223	ENST00000580263	ZEB1	P37275	1124 aa	Predicted RBP	29.11	■■■□□ 2.25
ACADVL-223	ENST00000580263	IL17RE	Q8NFR9	667 aa		29.11	■■■□□ 2.25
ACADVL-223	ENST00000580263	DLG5	Q8TDM6	1919 aa		29.1	■■■□□ 2.25
ACADVL-223	ENST00000580263	FCHSD2	O94868	740 aa		29.1	■■■□□ 2.25
ACADVL-223	ENST00000580263	C4A	P0C0L4	1744 aa		29.09	■■■□□ 2.25
ACADVL-223	ENST00000580263	CNTNAP4	Q9C0A0	1308 aa		29.09	■■■□□ 2.25
ACADVL-223	ENST00000580263	RALBP1	Q15311	655 aa		29.08	■■■□□ 2.25
ACADVL-223	ENST00000580263	KLHL34	Q8N239	644 aa		29.08	■■■□□ 2.25
ACADVL-223	ENST00000580263	RC3H1	Q5TC82	1133 aa	Known RBP	29.07	■■■□□ 2.24
ACADVL-223	ENST00000580263	RTCB	Q9Y3I0	505 aa	Known RBP	29.06	■■■□□ 2.24
ACADVL-223	ENST00000580263	CEMIP	Q8WUJ3	1361 aa		29.04	■■■□□ 2.24
ACADVL-223	ENST00000580263	TEF	Q10587	303 aa		29.04	■■■□□ 2.24
ACADVL-223	ENST00000580263	DNAJC10	Q8IXB1	793 aa		29.04	■■■□□ 2.24
ACADVL-223	ENST00000580263	CRKL	P46109	303 aa	Known RBP	29.03	■■■□□ 2.24
ACADVL-223	ENST00000580263	RPS6KA4	O75676	772 aa		29.02	■■■□□ 2.24
ACADVL-223	ENST00000580263	TRAPPC3L	Q5T215	181 aa		29.01	■■■□□ 2.23
ACADVL-223	ENST00000580263	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.99	■■■□□ 2.23
ACADVL-223	ENST00000580263	ARHGEF1	Q92888	912 aa	Known RBP	28.99	■■■□□ 2.23
ACADVL-223	ENST00000580263	DCAF8L1	A6NGE4	600 aa		28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	ADRA2B	P18089	450 aa		28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	INTS5	Q6P9B9	1019 aa	Known RBP	28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	MCM10	Q7L590	875 aa		28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	TTC5	Q8N0Z6	440 aa		28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	NLGN2	Q8NFZ4	835 aa		28.98	■■■□□ 2.23
ACADVL-223	ENST00000580263	PLEKHF1	Q96S99	279 aa		28.97	■■■□□ 2.23
ACADVL-223	ENST00000580263	CYP19A1	P11511	503 aa	Predicted RBP	28.96	■■■□□ 2.23
ACADVL-223	ENST00000580263	DCTN1	Q14203	1278 aa		28.96	■■■□□ 2.23
ACADVL-223	ENST00000580263	ZNF790	Q6PG37	636 aa		28.96	■■■□□ 2.23
ACADVL-223	ENST00000580263	RTF1	Q92541	710 aa	Known RBP	28.95	■■■□□ 2.22
ACADVL-223	ENST00000580263	ZNF496	Q96IT1	587 aa	Predicted RBP	28.95	■■■□□ 2.22
ACADVL-223	ENST00000580263	CCDC87	Q9NVE4	849 aa		28.95	■■■□□ 2.22
ACADVL-223	ENST00000580263	RFC4	P35249	363 aa		28.94	■■■□□ 2.22
ACADVL-223	ENST00000580263	VSIG10	Q8N0Z9	540 aa		28.94	■■■□□ 2.22
ACADVL-223	ENST00000580263	KCNQ3	O43525	872 aa		28.93	■■■□□ 2.22
ACADVL-223	ENST00000580263	NEFM	P07197	916 aa		28.93	■■■□□ 2.22
ACADVL-223	ENST00000580263	HEG1	Q9ULI3	1381 aa		28.92	■■■□□ 2.22
ACADVL-223	ENST00000580263	BTBD11	A6QL63	1104 aa		28.92	■■■□□ 2.22
ACADVL-223	ENST00000580263	GYS1	P13807	737 aa		28.91	■■■□□ 2.22
ACADVL-223	ENST00000580263	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.91	■■■□□ 2.22
ACADVL-223	ENST00000580263	SRP68	Q9UHB9	627 aa	Known RBP	28.91	■■■□□ 2.22
ACADVL-223	ENST00000580263	ZBTB1	Q9Y2K1	713 aa		28.91	■■■□□ 2.22
ACADVL-223	ENST00000580263	SOS1	Q07889	1333 aa	Predicted RBP	28.91	■■■□□ 2.22
ACADVL-223	ENST00000580263	HTATSF1	O43719	755 aa	Known RBP	28.9	■■■□□ 2.22
ACADVL-223	ENST00000580263	MMP10	P09238	476 aa		28.9	■■■□□ 2.22
ACADVL-223	ENST00000580263	CHD4	Q14839	1912 aa		28.9	■■■□□ 2.22
ACADVL-223	ENST00000580263	MAPK8IP3	Q9UPT6	1336 aa		28.89	■■■□□ 2.21
ACADVL-223	ENST00000580263	KIF13B	Q9NQT8	1826 aa		28.88	■■■□□ 2.21
ACADVL-223	ENST00000580263	NFE2L2	Q16236	605 aa		28.88	■■■□□ 2.21
ACADVL-223	ENST00000580263	NLGN1	Q8N2Q7	840 aa		28.88	■■■□□ 2.21
ACADVL-223	ENST00000580263	CD2AP	Q9Y5K6	639 aa		28.88	■■■□□ 2.21
ACADVL-223	ENST00000580263	USP42	Q9H9J4	1324 aa	Known RBP	28.88	■■■□□ 2.21
ACADVL-223	ENST00000580263	FMNL2	Q96PY5	1086 aa		28.87	■■■□□ 2.21
ACADVL-223	ENST00000580263	PNN	Q9H307	717 aa	Known RBP	28.87	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms