RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ATG3Q9NT62 314 aa24.53■■□□□ 1.52
MKS1-209ENST00000580127 UBR3Q6ZT12 1888 aa24.52■■□□□ 1.52
MKS1-209ENST00000580127 GPBP1L1Q9HC44 474 aaPredicted RBP24.52■■□□□ 1.52
MKS1-209ENST00000580127 RTCBQ9Y3I0 505 aaKnown RBP24.52■■□□□ 1.52
MKS1-209ENST00000580127 NLGN1Q8N2Q7 840 aa24.51■■□□□ 1.51
MKS1-209ENST00000580127 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
MKS1-209ENST00000580127 PANK3Q9H999 370 aa24.51■■□□□ 1.51
MKS1-209ENST00000580127 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
MKS1-209ENST00000580127 ITPK1Q13572 414 aa24.5■■□□□ 1.51
MKS1-209ENST00000580127 CABP4P57796 275 aa24.49■■□□□ 1.51
MKS1-209ENST00000580127 RC3H1Q5TC82 1133 aaKnown RBP24.49■■□□□ 1.51
MKS1-209ENST00000580127 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
MKS1-209ENST00000580127 AMIGO3Q86WK7 504 aa24.49■■□□□ 1.51
MKS1-209ENST00000580127 ADRA2BP18089 450 aa24.48■■□□□ 1.51
MKS1-209ENST00000580127 C1orf141Q5JVX7 400 aa24.48■■□□□ 1.51
MKS1-209ENST00000580127 ATP10DQ9P241 1426 aa24.47■■□□□ 1.51
MKS1-209ENST00000580127 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
MKS1-209ENST00000580127 SMIM5Q71RC9 77 aa24.47■■□□□ 1.51
MKS1-209ENST00000580127 GOLGB1Q14789 3259 aaKnown RBP24.46■■□□□ 1.51
MKS1-209ENST00000580127 MMP10P09238 476 aa24.46■■□□□ 1.51
MKS1-209ENST00000580127 RFC4P35249 363 aa24.46■■□□□ 1.51
MKS1-209ENST00000580127 MTHFSP49914 203 aa24.46■■□□□ 1.51
MKS1-209ENST00000580127 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
MKS1-209ENST00000580127 TGFB2P61812 414 aa24.45■■□□□ 1.5
MKS1-209ENST00000580127 KNSTRNQ9Y448 316 aa24.45■■□□□ 1.5
MKS1-209ENST00000580127 RPS6KA4O75676 772 aa24.42■■□□□ 1.5
MKS1-209ENST00000580127 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
MKS1-209ENST00000580127 WWC3Q9ULE0 1092 aa24.41■■□□□ 1.5
MKS1-209ENST00000580127 ZNF526Q8TF50 670 aaPredicted RBP24.4■■□□□ 1.5
MKS1-209ENST00000580127 ARHGEF1Q92888 912 aaKnown RBP24.4■■□□□ 1.5
MKS1-209ENST00000580127 PARP3Q9Y6F1 533 aa24.4■■□□□ 1.5
MKS1-209ENST00000580127 CNTNAP4Q9C0A0 1308 aa24.39■■□□□ 1.5
MKS1-209ENST00000580127 NFATC2IPQ8NCF5 419 aa24.38■■□□□ 1.49
MKS1-209ENST00000580127 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
MKS1-209ENST00000580127 ZNF831Q5JPB2 1677 aa24.37■■□□□ 1.49
MKS1-209ENST00000580127 PTCD1O75127 700 aaKnown RBP24.37■■□□□ 1.49
MKS1-209ENST00000580127 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
MKS1-209ENST00000580127 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
MKS1-209ENST00000580127 BCS1LQ9Y276 419 aa24.36■■□□□ 1.49
MKS1-209ENST00000580127 KDRP35968 1356 aa24.36■■□□□ 1.49
MKS1-209ENST00000580127 A0A0G2JLW4 131 aa24.35■■□□□ 1.49
MKS1-209ENST00000580127 ADCY9O60503 1353 aa24.34■■□□□ 1.49
MKS1-209ENST00000580127 GYS1P13807 737 aa24.34■■□□□ 1.49
MKS1-209ENST00000580127 ARHGAP27Q6ZUM4 889 aa24.34■■□□□ 1.49
MKS1-209ENST00000580127 AEBP1Q8IUX7 1158 aa24.33■■□□□ 1.49
MKS1-209ENST00000580127 HSPA6P17066 643 aa24.31■■□□□ 1.48
MKS1-209ENST00000580127 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
MKS1-209ENST00000580127 AKAP4Q5JQC9 854 aa24.31■■□□□ 1.48
MKS1-209ENST00000580127 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
MKS1-209ENST00000580127 FCHSD2O94868 740 aa24.3■■□□□ 1.48
MKS1-209ENST00000580127 IL13P35225 146 aa24.3■■□□□ 1.48
MKS1-209ENST00000580127 DPEP1P16444 411 aa24.29■■□□□ 1.48
MKS1-209ENST00000580127 PIM2Q9P1W9 311 aa24.29■■□□□ 1.48
MKS1-209ENST00000580127 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
MKS1-209ENST00000580127 CICQ96RK0 1608 aaPredicted RBP24.28■■□□□ 1.48
MKS1-209ENST00000580127 PXDNLA1KZ92 1463 aa24.28■■□□□ 1.48
MKS1-209ENST00000580127 ZPR1O75312 459 aa24.28■■□□□ 1.48
MKS1-209ENST00000580127 COL5A3P25940 1745 aaPredicted RBP24.27■■□□□ 1.48
MKS1-209ENST00000580127 C10orf71Q711Q0 1435 aa24.26■■□□□ 1.47
MKS1-209ENST00000580127 N4BP2Q86UW6 1770 aaPredicted RBP24.25■■□□□ 1.47
MKS1-209ENST00000580127 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
MKS1-209ENST00000580127 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
MKS1-209ENST00000580127 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
MKS1-209ENST00000580127 DALRD3Q5D0E6 543 aaKnown RBP24.24■■□□□ 1.47
MKS1-209ENST00000580127 USP42Q9H9J4 1324 aaKnown RBP24.24■■□□□ 1.47
MKS1-209ENST00000580127 KIF3CO14782 793 aa24.23■■□□□ 1.47
MKS1-209ENST00000580127 TOMM70O94826 608 aa24.23■■□□□ 1.47
MKS1-209ENST00000580127 FKBP8Q14318 412 aa24.22■■□□□ 1.47
MKS1-209ENST00000580127 AMER1Q5JTC6 1135 aaPredicted RBP24.22■■□□□ 1.47
MKS1-209ENST00000580127 SRP68Q9UHB9 627 aaKnown RBP24.22■■□□□ 1.47
MKS1-209ENST00000580127 DIAPH1O60610 1272 aaKnown RBP24.21■■□□□ 1.47
MKS1-209ENST00000580127 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
MKS1-209ENST00000580127 RNMTO43148 476 aaKnown RBP24.2■■□□□ 1.46
MKS1-209ENST00000580127 LGR6Q9HBX8 967 aa24.2■■□□□ 1.46
MKS1-209ENST00000580127 SCN11AQ9UI33 1791 aa24.2■■□□□ 1.46
MKS1-209ENST00000580127 HMOX1P09601 288 aa24.19■■□□□ 1.46
MKS1-209ENST00000580127 KCNA3P22001 575 aa24.19■■□□□ 1.46
MKS1-209ENST00000580127 APLP1P51693 650 aa24.19■■□□□ 1.46
MKS1-209ENST00000580127 DNAJC10Q8IXB1 793 aa24.19■■□□□ 1.46
MKS1-209ENST00000580127 C16orf71Q8IYS4 520 aaPredicted RBP24.19■■□□□ 1.46
MKS1-209ENST00000580127 TM4SF1P30408 202 aa24.18■■□□□ 1.46
MKS1-209ENST00000580127 IFFO2Q5TF58 517 aa24.17■■□□□ 1.46
MKS1-209ENST00000580127 C9orf131Q5VYM1 1079 aa24.17■■□□□ 1.46
MKS1-209ENST00000580127 VSIG10Q8N0Z9 540 aa24.17■■□□□ 1.46
MKS1-209ENST00000580127 KDM2BQ8NHM5 1336 aa24.16■■□□□ 1.46
MKS1-209ENST00000580127 CYP19A1P11511 503 aaPredicted RBP24.16■■□□□ 1.46
MKS1-209ENST00000580127 USPL1Q5W0Q7 1092 aa24.16■■□□□ 1.46
MKS1-209ENST00000580127 NARFQ9UHQ1 456 aa24.16■■□□□ 1.46
MKS1-209ENST00000580127 KIAA1551Q9HCM1 1747 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 CEP350Q5VT06 3117 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 STARD3NLO95772 234 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 DDR1Q08345 913 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 SLC39A6Q13433 755 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 TTC5Q8N0Z6 440 aa24.15■■□□□ 1.46
MKS1-209ENST00000580127 POLRMTO00411 1230 aaKnown RBP24.14■■□□□ 1.45
MKS1-209ENST00000580127 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
MKS1-209ENST00000580127 CC2D1BQ5T0F9 858 aaKnown RBP24.14■■□□□ 1.45
MKS1-209ENST00000580127 SOS1Q07889 1333 aaPredicted RBP24.13■■□□□ 1.45
MKS1-209ENST00000580127 ARFGEF1Q9Y6D6 1849 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms