RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
SSH2-209ENST00000579954 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
SSH2-209ENST00000579954 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
SSH2-209ENST00000579954 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
SSH2-209ENST00000579954 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
SSH2-209ENST00000579954 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
SSH2-209ENST00000579954 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
SSH2-209ENST00000579954 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
SSH2-209ENST00000579954 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 SIK1P57059 783 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 AK7Q96M32 723 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 SPON1Q9HCB6 807 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 ATG3Q9NT62 314 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
SSH2-209ENST00000579954 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
SSH2-209ENST00000579954 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
SSH2-209ENST00000579954 PHF14O94880 888 aa12.06□□□□□ -0.48
SSH2-209ENST00000579954 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
SSH2-209ENST00000579954 SLC52A2Q9HAB3 445 aa12.06□□□□□ -0.48
SSH2-209ENST00000579954 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
SSH2-209ENST00000579954 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
SSH2-209ENST00000579954 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
SSH2-209ENST00000579954 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
SSH2-209ENST00000579954 FCHSD2O94868 740 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 TEFQ10587 303 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSH2-209ENST00000579954 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
SSH2-209ENST00000579954 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 MRC1P22897 1456 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 TJP1Q07157 1748 aa12.05□□□□□ -0.48
SSH2-209ENST00000579954 ZNF831Q5JPB2 1677 aa12.04□□□□□ -0.48
SSH2-209ENST00000579954 PRKRIP1Q9H875 184 aaPredicted RBP12.04□□□□□ -0.48
SSH2-209ENST00000579954 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
SSH2-209ENST00000579954 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
SSH2-209ENST00000579954 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
SSH2-209ENST00000579954 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
SSH2-209ENST00000579954 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
SSH2-209ENST00000579954 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
SSH2-209ENST00000579954 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.48
SSH2-209ENST00000579954 GNPATO15228 680 aa12.02□□□□□ -0.49
SSH2-209ENST00000579954 ITPK1Q13572 414 aa12.02□□□□□ -0.49
SSH2-209ENST00000579954 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
SSH2-209ENST00000579954 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
SSH2-209ENST00000579954 ANP32CO43423 234 aa12.01□□□□□ -0.49
SSH2-209ENST00000579954 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
SSH2-209ENST00000579954 MCM10Q7L590 875 aa12.01□□□□□ -0.49
SSH2-209ENST00000579954 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
SSH2-209ENST00000579954 MYH14Q7Z406 1995 aaKnown RBP12□□□□□ -0.49
SSH2-209ENST00000579954 POLD1P28340 1107 aa12□□□□□ -0.49
SSH2-209ENST00000579954 DCTN1Q14203 1278 aa12□□□□□ -0.49
SSH2-209ENST00000579954 SMIM5Q71RC9 77 aa12□□□□□ -0.49
SSH2-209ENST00000579954 COL23A1Q86Y22 540 aaPredicted RBP12□□□□□ -0.49
SSH2-209ENST00000579954 IL17REQ8NFR9 667 aa12□□□□□ -0.49
SSH2-209ENST00000579954 KCPQ6ZWJ8 1503 aa12□□□□□ -0.49
SSH2-209ENST00000579954 C4AP0C0L4 1744 aa12□□□□□ -0.49
SSH2-209ENST00000579954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
SSH2-209ENST00000579954 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
SSH2-209ENST00000579954 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
SSH2-209ENST00000579954 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
SSH2-209ENST00000579954 CICQ96RK0 1608 aaPredicted RBP11.99□□□□□ -0.49
SSH2-209ENST00000579954 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SSH2-209ENST00000579954 SLC16A10Q8TF71 515 aa11.98□□□□□ -0.49
SSH2-209ENST00000579954 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
SSH2-209ENST00000579954 SSFA2P28290 1259 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 CRKLP46109 303 aaKnown RBP11.97□□□□□ -0.49
SSH2-209ENST00000579954 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 DNAJC10Q8IXB1 793 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
SSH2-209ENST00000579954 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
SSH2-209ENST00000579954 CNTNAP4Q9C0A0 1308 aa11.96□□□□□ -0.49
SSH2-209ENST00000579954 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.49
SSH2-209ENST00000579954 ARXQ96QS3 562 aa11.96□□□□□ -0.49
SSH2-209ENST00000579954 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
SSH2-209ENST00000579954 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
SSH2-209ENST00000579954 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
SSH2-209ENST00000579954 RFC4P35249 363 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 PTGER2P43116 358 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 RIPK4P57078 832 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 ZNF790Q6PG37 636 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
SSH2-209ENST00000579954 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
SSH2-209ENST00000579954 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
SSH2-209ENST00000579954 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
SSH2-209ENST00000579954 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
SSH2-209ENST00000579954 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
SSH2-209ENST00000579954 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
SSH2-209ENST00000579954 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
SSH2-209ENST00000579954 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
SSH2-209ENST00000579954 CCDC87Q9NVE4 849 aa11.94□□□□□ -0.5
SSH2-209ENST00000579954 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
SSH2-209ENST00000579954 KCNQ3O43525 872 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms