RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
CDK5RAP3-216ENST00000579853 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 SMIM5Q71RC9 77 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CDK5RAP3-216ENST00000579853 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
CDK5RAP3-216ENST00000579853 ITPK1Q13572 414 aa16.97■□□□□ 0.31
CDK5RAP3-216ENST00000579853 ASAP1Q9ULH1 1129 aa16.97■□□□□ 0.31
CDK5RAP3-216ENST00000579853 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
CDK5RAP3-216ENST00000579853 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-216ENST00000579853 CCDC87Q9NVE4 849 aa16.96■□□□□ 0.31
CDK5RAP3-216ENST00000579853 PHKG2P15735 406 aa16.95■□□□□ 0.3
CDK5RAP3-216ENST00000579853 RC3H1Q5TC82 1133 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
CDK5RAP3-216ENST00000579853 DNAJC5GQ8N7S2 189 aa16.95■□□□□ 0.3
CDK5RAP3-216ENST00000579853 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
CDK5RAP3-216ENST00000579853 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
CDK5RAP3-216ENST00000579853 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-216ENST00000579853 EYA1Q99502 592 aa16.94■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
CDK5RAP3-216ENST00000579853 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 FCHSD2O94868 740 aa16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ZNF831Q5JPB2 1677 aa16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
CDK5RAP3-216ENST00000579853 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-216ENST00000579853 RFC4P35249 363 aa16.92■□□□□ 0.3
CDK5RAP3-216ENST00000579853 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
CDK5RAP3-216ENST00000579853 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
CDK5RAP3-216ENST00000579853 KIAA1551Q9HCM1 1747 aa16.92■□□□□ 0.3
CDK5RAP3-216ENST00000579853 KDRP35968 1356 aa16.91■□□□□ 0.3
CDK5RAP3-216ENST00000579853 FSTL1Q12841 308 aa16.91■□□□□ 0.3
CDK5RAP3-216ENST00000579853 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
CDK5RAP3-216ENST00000579853 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
CDK5RAP3-216ENST00000579853 CNTNAP4Q9C0A0 1308 aa16.91■□□□□ 0.3
CDK5RAP3-216ENST00000579853 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 GYS1P13807 737 aa16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 DPEP1P16444 411 aa16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
CDK5RAP3-216ENST00000579853 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
CDK5RAP3-216ENST00000579853 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
CDK5RAP3-216ENST00000579853 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
CDK5RAP3-216ENST00000579853 WDR90Q96KV7 1748 aa16.88■□□□□ 0.29
CDK5RAP3-216ENST00000579853 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
CDK5RAP3-216ENST00000579853 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
CDK5RAP3-216ENST00000579853 POLKQ9UBT6 870 aa16.88■□□□□ 0.29
CDK5RAP3-216ENST00000579853 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-216ENST00000579853 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-216ENST00000579853 JMYQ8N9B5 988 aa16.86■□□□□ 0.29
CDK5RAP3-216ENST00000579853 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
CDK5RAP3-216ENST00000579853 COL5A3P25940 1745 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-216ENST00000579853 KCNA3P22001 575 aa16.85■□□□□ 0.29
CDK5RAP3-216ENST00000579853 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-216ENST00000579853 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-216ENST00000579853 CABP4P57796 275 aa16.84■□□□□ 0.29
CDK5RAP3-216ENST00000579853 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
CDK5RAP3-216ENST00000579853 MYH14Q7Z406 1995 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-216ENST00000579853 RNF181Q9P0P0 153 aa16.83■□□□□ 0.28
CDK5RAP3-216ENST00000579853 ZC3H4Q9UPT8 1303 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-216ENST00000579853 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-216ENST00000579853 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-216ENST00000579853 ZNF530Q6P9A1 599 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-216ENST00000579853 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
CDK5RAP3-216ENST00000579853 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-216ENST00000579853 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
CDK5RAP3-216ENST00000579853 MTHFSP49914 203 aa16.8■□□□□ 0.28
CDK5RAP3-216ENST00000579853 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-216ENST00000579853 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
CDK5RAP3-216ENST00000579853 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
CDK5RAP3-216ENST00000579853 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-216ENST00000579853 COL13A1Q5TAT6 717 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-216ENST00000579853 SBF1O95248 1867 aa16.78■□□□□ 0.28
CDK5RAP3-216ENST00000579853 HTRA3P83110 453 aa16.78■□□□□ 0.28
CDK5RAP3-216ENST00000579853 FKBP8Q14318 412 aa16.78■□□□□ 0.28
CDK5RAP3-216ENST00000579853 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-216ENST00000579853 ZPR1O75312 459 aa16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 DDR1Q08345 913 aa16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 TNS4Q8IZW8 715 aa16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-216ENST00000579853 CHRNA5P30532 468 aa16.76■□□□□ 0.27
CDK5RAP3-216ENST00000579853 POLRMTO00411 1230 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-216ENST00000579853 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-216ENST00000579853 TM4SF1P30408 202 aa16.75■□□□□ 0.27
CDK5RAP3-216ENST00000579853 LMNB1P20700 586 aa16.74■□□□□ 0.27
CDK5RAP3-216ENST00000579853 TIMELESSQ9UNS1 1208 aa16.74■□□□□ 0.27
CDK5RAP3-216ENST00000579853 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
CDK5RAP3-216ENST00000579853 PRELPP51888 382 aa16.73■□□□□ 0.27
CDK5RAP3-216ENST00000579853 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-216ENST00000579853 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
CDK5RAP3-216ENST00000579853 TTLL6Q8N841 843 aa16.71■□□□□ 0.27
CDK5RAP3-216ENST00000579853 TJP1Q07157 1748 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms