RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
SNRPD1-203ENST00000579618 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
SNRPD1-203ENST00000579618 A0A0G2JLW4 131 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 CYP27B1O15528 508 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 MMP10P09238 476 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 ARHGAP27Q6ZUM4 889 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 COG3Q96JB2 828 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 TERF2IPQ9NYB0 399 aa14.03□□□□□ -0.16
SNRPD1-203ENST00000579618 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
SNRPD1-203ENST00000579618 PLEKHG2Q9H7P9 1386 aa14.02□□□□□ -0.17
SNRPD1-203ENST00000579618 FSTL1Q12841 308 aa14.02□□□□□ -0.17
SNRPD1-203ENST00000579618 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
SNRPD1-203ENST00000579618 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
SNRPD1-203ENST00000579618 GNPATO15228 680 aa14.01□□□□□ -0.17
SNRPD1-203ENST00000579618 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
SNRPD1-203ENST00000579618 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
SNRPD1-203ENST00000579618 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
SNRPD1-203ENST00000579618 FCHSD2O94868 740 aa14□□□□□ -0.17
SNRPD1-203ENST00000579618 DPEP1P16444 411 aa14□□□□□ -0.17
SNRPD1-203ENST00000579618 TGFB2P61812 414 aa14□□□□□ -0.17
SNRPD1-203ENST00000579618 ITPK1Q13572 414 aa14□□□□□ -0.17
SNRPD1-203ENST00000579618 PIGBQ92521 554 aa14□□□□□ -0.17
SNRPD1-203ENST00000579618 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
SNRPD1-203ENST00000579618 HSPA1AP0DMV8 641 aaKnown RBP13.99□□□□□ -0.17
SNRPD1-203ENST00000579618 HSPA1BP0DMV9 641 aaKnown RBP13.99□□□□□ -0.17
SNRPD1-203ENST00000579618 SIK1P57059 783 aa13.99□□□□□ -0.17
SNRPD1-203ENST00000579618 COL5A3P25940 1745 aaPredicted RBP13.98□□□□□ -0.17
SNRPD1-203ENST00000579618 SBF1O95248 1867 aa13.97□□□□□ -0.17
SNRPD1-203ENST00000579618 PANK3Q9H999 370 aa13.97□□□□□ -0.17
SNRPD1-203ENST00000579618 RRAGCQ9HB90 399 aa13.97□□□□□ -0.17
SNRPD1-203ENST00000579618 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
SNRPD1-203ENST00000579618 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
SNRPD1-203ENST00000579618 KCNA3P22001 575 aa13.96□□□□□ -0.17
SNRPD1-203ENST00000579618 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
SNRPD1-203ENST00000579618 RNF181Q9P0P0 153 aa13.96□□□□□ -0.17
SNRPD1-203ENST00000579618 ASAP1Q9ULH1 1129 aa13.96□□□□□ -0.17
SNRPD1-203ENST00000579618 INSRP06213 1382 aa13.96□□□□□ -0.18
SNRPD1-203ENST00000579618 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
SNRPD1-203ENST00000579618 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
SNRPD1-203ENST00000579618 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
SNRPD1-203ENST00000579618 KNSTRNQ9Y448 316 aa13.95□□□□□ -0.18
SNRPD1-203ENST00000579618 KDRP35968 1356 aa13.95□□□□□ -0.18
SNRPD1-203ENST00000579618 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 ZNF831Q5JPB2 1677 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 FLT4P35916 1363 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
SNRPD1-203ENST00000579618 SLC34A2O95436 690 aa13.93□□□□□ -0.18
SNRPD1-203ENST00000579618 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
SNRPD1-203ENST00000579618 DCAF5Q96JK2 942 aa13.93□□□□□ -0.18
SNRPD1-203ENST00000579618 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
SNRPD1-203ENST00000579618 GYS1P13807 737 aa13.92□□□□□ -0.18
SNRPD1-203ENST00000579618 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
SNRPD1-203ENST00000579618 ANKRD26Q9UPS8 1709 aa13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 CARD14Q9BXL6 1004 aa13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
SNRPD1-203ENST00000579618 FYB1O15117 783 aa13.9□□□□□ -0.18
SNRPD1-203ENST00000579618 RASSF7Q02833 373 aa13.9□□□□□ -0.18
SNRPD1-203ENST00000579618 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
SNRPD1-203ENST00000579618 PIM2Q9P1W9 311 aa13.9□□□□□ -0.18
SNRPD1-203ENST00000579618 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
SNRPD1-203ENST00000579618 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
SNRPD1-203ENST00000579618 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
SNRPD1-203ENST00000579618 ANP32CO43423 234 aa13.88□□□□□ -0.19
SNRPD1-203ENST00000579618 CHRNA5P30532 468 aa13.88□□□□□ -0.19
SNRPD1-203ENST00000579618 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
SNRPD1-203ENST00000579618 SPG7Q9UQ90 795 aa13.88□□□□□ -0.19
SNRPD1-203ENST00000579618 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
SNRPD1-203ENST00000579618 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
SNRPD1-203ENST00000579618 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
SNRPD1-203ENST00000579618 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
SNRPD1-203ENST00000579618 TJP1Q07157 1748 aa13.87□□□□□ -0.19
SNRPD1-203ENST00000579618 ADAMTS7Q9UKP4 1686 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 PHKG2P15735 406 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 ADRA2BP18089 450 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 RFC4P35249 363 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 DDR1Q08345 913 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 RALBP1Q15311 655 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 CCDC88AQ3V6T2 1871 aa13.86□□□□□ -0.19
SNRPD1-203ENST00000579618 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
SNRPD1-203ENST00000579618 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
SNRPD1-203ENST00000579618 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
SNRPD1-203ENST00000579618 FKBP8Q14318 412 aa13.84□□□□□ -0.19
SNRPD1-203ENST00000579618 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
SNRPD1-203ENST00000579618 IFNL2Q8IZJ0 200 aa13.84□□□□□ -0.19
SNRPD1-203ENST00000579618 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
SNRPD1-203ENST00000579618 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
SNRPD1-203ENST00000579618 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
SNRPD1-203ENST00000579618 PRKRIP1Q9H875 184 aaPredicted RBP13.83□□□□□ -0.2
SNRPD1-203ENST00000579618 NRXN2Q9P2S2 1712 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms