RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 PHKG2P15735 406 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 SIK1P57059 783 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 EIF4A2Q14240 407 aaKnown RBP5.31□□□□□ -1.56
NUP85-209ENST00000578987 CDCA8Q53HL2 280 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 SMARCC1Q92922 1105 aaPredicted RBP5.31□□□□□ -1.56
NUP85-209ENST00000578987 RBM42Q9BTD8 480 aaKnown RBP5.31□□□□□ -1.56
NUP85-209ENST00000578987 PANK3Q9H999 370 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 ATG3Q9NT62 314 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 TMOD3Q9NYL9 352 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 A0A0G2JLW4 131 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 GNPATO15228 680 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 GRIN3BO60391 1043 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 HSPA5P11021 654 aaKnown RBP5.3□□□□□ -1.56
NUP85-209ENST00000578987 NKX1-1Q15270 411 aaPredicted RBP5.3□□□□□ -1.56
NUP85-209ENST00000578987 TPRNQ4KMQ1 711 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 IFNL2Q8IZJ0 200 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 FLAD1Q8NFF5 587 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 SLC4A9Q96Q91 983 aa5.3□□□□□ -1.56
NUP85-209ENST00000578987 GOLGB1Q14789 3259 aaKnown RBP5.29□□□□□ -1.56
NUP85-209ENST00000578987 IGSF1Q8N6C5 1336 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 SBF1O95248 1867 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 CNGB1Q14028 1251 aaPredicted RBP5.29□□□□□ -1.56
NUP85-209ENST00000578987 CD2APQ9Y5K6 639 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 KIF13BQ9NQT8 1826 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 SCN11AQ9UI33 1791 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 KIF24Q5T7B8 1368 aa5.29□□□□□ -1.56
NUP85-209ENST00000578987 C4AP0C0L4 1744 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 COL5A3P25940 1745 aaPredicted RBP5.28□□□□□ -1.56
NUP85-209ENST00000578987 KIAA1551Q9HCM1 1747 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 BRCA1P38398 1863 aaKnown RBP5.28□□□□□ -1.56
NUP85-209ENST00000578987 PTCD1O75127 700 aaKnown RBP5.28□□□□□ -1.56
NUP85-209ENST00000578987 MMP10P09238 476 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 CABP4P57796 275 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 EIF4G2P78344 907 aaKnown RBP eCLIP5.28□□□□□ -1.56
NUP85-209ENST00000578987 TRAPPC3LQ5T215 181 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 AEBP1Q8IUX7 1158 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 NFATC2IPQ8NCF5 419 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 ARHGEF1Q92888 912 aaKnown RBP5.28□□□□□ -1.56
NUP85-209ENST00000578987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.28□□□□□ -1.563e-12■□□□□ 8.9
NUP85-209ENST00000578987 NCAPD2Q15021 1401 aa5.28□□□□□ -1.56
NUP85-209ENST00000578987 AFDNP55196 1824 aaKnown RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 ERVV-2B6SEH9 535 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 ATXN8OSP0DMR3 200 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 SSFA2P28290 1259 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 MTHFSP49914 203 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 CACNB1Q02641 598 aaPredicted RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 CACNA1SQ13698 1873 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 IFFO2Q5TF58 517 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 SULT6B1Q6IMI4 303 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 ZNF530Q6P9A1 599 aaPredicted RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 ARHGAP27Q6ZUM4 889 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 GPBP1L1Q9HC44 474 aaPredicted RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 ATP10DQ9P241 1426 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 BCS1LQ9Y276 419 aa5.27□□□□□ -1.57
NUP85-209ENST00000578987 RTCBQ9Y3I0 505 aaKnown RBP5.27□□□□□ -1.57
NUP85-209ENST00000578987 CICQ96RK0 1608 aaPredicted RBP5.26□□□□□ -1.57
NUP85-209ENST00000578987 TJP1Q07157 1748 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 ARFGEF1Q9Y6D6 1849 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 RPS6KA4O75676 772 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 FCHSD2O94868 740 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 HMOX1P09601 288 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 GYS1P13807 737 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 DPEP1P16444 411 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 RFC4P35249 363 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 ERICH6Q7L0X2 663 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 CCER1Q8TC90 406 aaPredicted RBP5.26□□□□□ -1.57
NUP85-209ENST00000578987 DCAF5Q96JK2 942 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 LGR6Q9HBX8 967 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 SRP68Q9UHB9 627 aaKnown RBP5.26□□□□□ -1.57
NUP85-209ENST00000578987 TIMELESSQ9UNS1 1208 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 PARP3Q9Y6F1 533 aa5.26□□□□□ -1.57
NUP85-209ENST00000578987 ZNF831Q5JPB2 1677 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 KDM6AO15550 1401 aaPredicted RBP5.25□□□□□ -1.57
NUP85-209ENST00000578987 KCNA3P22001 575 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 HMGB2P26583 209 aaKnown RBP5.25□□□□□ -1.57
NUP85-209ENST00000578987 IL13P35225 146 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 CRKLP46109 303 aaKnown RBP5.25□□□□□ -1.57
NUP85-209ENST00000578987 SLC39A6Q13433 755 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 C1orf141Q5JVX7 400 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 RC3H1Q5TC82 1133 aaKnown RBP5.25□□□□□ -1.57
NUP85-209ENST00000578987 INTS5Q6P9B9 1019 aaKnown RBP5.25□□□□□ -1.57
NUP85-209ENST00000578987 NLGN1Q8N2Q7 840 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 CCDC87Q9NVE4 849 aa5.25□□□□□ -1.57
NUP85-209ENST00000578987 KIF3CO14782 793 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 HSP90AB1P08238 724 aaKnown RBP5.24□□□□□ -1.57
NUP85-209ENST00000578987 HSPA6P17066 643 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 CHRNA5P30532 468 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 TGFB2P61812 414 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 AMOTQ4VCS5 1084 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 CC2D1BQ5T0F9 858 aaKnown RBP5.24□□□□□ -1.57
NUP85-209ENST00000578987 DNAJC10Q8IXB1 793 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 PIAS4Q8N2W9 510 aaPredicted RBP5.24□□□□□ -1.57
NUP85-209ENST00000578987 KNSTRNQ9Y448 316 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 KDRP35968 1356 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 PXDNLA1KZ92 1463 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 ADAMTS7Q9UKP4 1686 aa5.24□□□□□ -1.57
NUP85-209ENST00000578987 RNMTO43148 476 aaKnown RBP5.23□□□□□ -1.57
NUP85-209ENST00000578987 TM4SF1P30408 202 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms