RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 IL13P35225 146 aa17.52■□□□□ 0.4
UBB-207ENST00000578649 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
UBB-207ENST00000578649 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
UBB-207ENST00000578649 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
UBB-207ENST00000578649 DCAF5Q96JK2 942 aa17.52■□□□□ 0.4
UBB-207ENST00000578649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
UBB-207ENST00000578649 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
UBB-207ENST00000578649 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
UBB-207ENST00000578649 GPR162Q16538 588 aa17.51■□□□□ 0.39
UBB-207ENST00000578649 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
UBB-207ENST00000578649 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
UBB-207ENST00000578649 MTHFSP49914 203 aa17.5■□□□□ 0.39
UBB-207ENST00000578649 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
UBB-207ENST00000578649 UBR3Q6ZT12 1888 aa17.49■□□□□ 0.39
UBB-207ENST00000578649 KDRP35968 1356 aa17.49■□□□□ 0.39
UBB-207ENST00000578649 SSFA2P28290 1259 aa17.48■□□□□ 0.39
UBB-207ENST00000578649 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
UBB-207ENST00000578649 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
UBB-207ENST00000578649 GNPATO15228 680 aa17.47■□□□□ 0.39
UBB-207ENST00000578649 CABP4P57796 275 aa17.47■□□□□ 0.39
UBB-207ENST00000578649 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
UBB-207ENST00000578649 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
UBB-207ENST00000578649 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
UBB-207ENST00000578649 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
UBB-207ENST00000578649 HMOX1P09601 288 aa17.44■□□□□ 0.38
UBB-207ENST00000578649 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.383e-15■■□□□ 13.5
UBB-207ENST00000578649 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
UBB-207ENST00000578649 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
UBB-207ENST00000578649 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
UBB-207ENST00000578649 CHD4Q14839 1912 aa17.42■□□□□ 0.38
UBB-207ENST00000578649 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
UBB-207ENST00000578649 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
UBB-207ENST00000578649 AKAP4Q5JQC9 854 aa17.41■□□□□ 0.38
UBB-207ENST00000578649 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
UBB-207ENST00000578649 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
UBB-207ENST00000578649 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
UBB-207ENST00000578649 RC3H1Q5TC82 1133 aaKnown RBP17.4■□□□□ 0.38
UBB-207ENST00000578649 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
UBB-207ENST00000578649 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.37
UBB-207ENST00000578649 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
UBB-207ENST00000578649 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
UBB-207ENST00000578649 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
UBB-207ENST00000578649 RPS6KA4O75676 772 aa17.38■□□□□ 0.37
UBB-207ENST00000578649 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
UBB-207ENST00000578649 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
UBB-207ENST00000578649 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
UBB-207ENST00000578649 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
UBB-207ENST00000578649 MMP10P09238 476 aa17.37■□□□□ 0.37
UBB-207ENST00000578649 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
UBB-207ENST00000578649 CRKLP46109 303 aaKnown RBP17.36■□□□□ 0.37
UBB-207ENST00000578649 WWC3Q9ULE0 1092 aa17.36■□□□□ 0.37
UBB-207ENST00000578649 GYS1P13807 737 aa17.35■□□□□ 0.37
UBB-207ENST00000578649 RFC4P35249 363 aa17.35■□□□□ 0.37
UBB-207ENST00000578649 NLGN1Q8N2Q7 840 aa17.35■□□□□ 0.37
UBB-207ENST00000578649 MYH14Q7Z406 1995 aaKnown RBP17.35■□□□□ 0.37
UBB-207ENST00000578649 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
UBB-207ENST00000578649 MRC1P22897 1456 aa17.34■□□□□ 0.37
UBB-207ENST00000578649 TJP1Q07157 1748 aa17.34■□□□□ 0.37
UBB-207ENST00000578649 SLC39A6Q13433 755 aa17.34■□□□□ 0.37
UBB-207ENST00000578649 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
UBB-207ENST00000578649 DNAJC10Q8IXB1 793 aa17.32■□□□□ 0.36
UBB-207ENST00000578649 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
UBB-207ENST00000578649 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
UBB-207ENST00000578649 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
UBB-207ENST00000578649 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
UBB-207ENST00000578649 CYP19A1P11511 503 aaPredicted RBP17.29■□□□□ 0.36
UBB-207ENST00000578649 CCDC87Q9NVE4 849 aa17.29■□□□□ 0.36
UBB-207ENST00000578649 KCPQ6ZWJ8 1503 aa17.29■□□□□ 0.36
UBB-207ENST00000578649 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
UBB-207ENST00000578649 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
UBB-207ENST00000578649 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
UBB-207ENST00000578649 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
UBB-207ENST00000578649 FKBP8Q14318 412 aa17.28■□□□□ 0.36
UBB-207ENST00000578649 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
UBB-207ENST00000578649 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
UBB-207ENST00000578649 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
UBB-207ENST00000578649 KIF13BQ9NQT8 1826 aa17.27■□□□□ 0.36
UBB-207ENST00000578649 TGFB2P61812 414 aa17.27■□□□□ 0.36
UBB-207ENST00000578649 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.36
UBB-207ENST00000578649 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.35
UBB-207ENST00000578649 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
UBB-207ENST00000578649 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
UBB-207ENST00000578649 C1QTNF8P60827 252 aa17.26■□□□□ 0.35
UBB-207ENST00000578649 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
UBB-207ENST00000578649 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
UBB-207ENST00000578649 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
UBB-207ENST00000578649 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
UBB-207ENST00000578649 DDR1Q08345 913 aa17.25■□□□□ 0.35
UBB-207ENST00000578649 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
UBB-207ENST00000578649 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
UBB-207ENST00000578649 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
UBB-207ENST00000578649 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
UBB-207ENST00000578649 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
UBB-207ENST00000578649 DPEP1P16444 411 aa17.24■□□□□ 0.35
UBB-207ENST00000578649 USPL1Q5W0Q7 1092 aa17.24■□□□□ 0.35
UBB-207ENST00000578649 ZBTB1Q9Y2K1 713 aa17.24■□□□□ 0.35
UBB-207ENST00000578649 ZPR1O75312 459 aa17.23■□□□□ 0.35
UBB-207ENST00000578649 TM4SF1P30408 202 aa17.23■□□□□ 0.35
UBB-207ENST00000578649 TEFQ10587 303 aa17.23■□□□□ 0.35
UBB-207ENST00000578649 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms