RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
CTC1-204ENST00000578441 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
CTC1-204ENST00000578441 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
CTC1-204ENST00000578441 KDRP35968 1356 aa13.87□□□□□ -0.19
CTC1-204ENST00000578441 ATP6V1AP38606 617 aa13.87□□□□□ -0.19
CTC1-204ENST00000578441 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
CTC1-204ENST00000578441 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
CTC1-204ENST00000578441 GNPATO15228 680 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 PHF14O94880 888 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 ADRA2BP18089 450 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
CTC1-204ENST00000578441 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
CTC1-204ENST00000578441 ITPK1Q13572 414 aa13.85□□□□□ -0.19
CTC1-204ENST00000578441 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
CTC1-204ENST00000578441 RC3H1Q5TC82 1133 aaKnown RBP13.85□□□□□ -0.19
CTC1-204ENST00000578441 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
CTC1-204ENST00000578441 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
CTC1-204ENST00000578441 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
CTC1-204ENST00000578441 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
CTC1-204ENST00000578441 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
CTC1-204ENST00000578441 TOMM70O94826 608 aa13.83□□□□□ -0.2
CTC1-204ENST00000578441 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
CTC1-204ENST00000578441 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.2
CTC1-204ENST00000578441 PANK3Q9H999 370 aa13.83□□□□□ -0.2
CTC1-204ENST00000578441 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
CTC1-204ENST00000578441 TGFB2P61812 414 aa13.82□□□□□ -0.2
CTC1-204ENST00000578441 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
CTC1-204ENST00000578441 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
CTC1-204ENST00000578441 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
CTC1-204ENST00000578441 MMP10P09238 476 aa13.81□□□□□ -0.2
CTC1-204ENST00000578441 CABP4P57796 275 aa13.81□□□□□ -0.2
CTC1-204ENST00000578441 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
CTC1-204ENST00000578441 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
CTC1-204ENST00000578441 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
CTC1-204ENST00000578441 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
CTC1-204ENST00000578441 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
CTC1-204ENST00000578441 KNSTRNQ9Y448 316 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 C10orf71Q711Q0 1435 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
CTC1-204ENST00000578441 MTHFSP49914 203 aa13.79□□□□□ -0.2
CTC1-204ENST00000578441 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
CTC1-204ENST00000578441 RFC4P35249 363 aa13.78□□□□□ -0.2
CTC1-204ENST00000578441 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
CTC1-204ENST00000578441 JMYQ8N9B5 988 aa13.78□□□□□ -0.2
CTC1-204ENST00000578441 GYS1P13807 737 aa13.77□□□□□ -0.21
CTC1-204ENST00000578441 BRCA1P38398 1863 aaKnown RBP13.77□□□□□ -0.21
CTC1-204ENST00000578441 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
CTC1-204ENST00000578441 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
CTC1-204ENST00000578441 CCDC87Q9NVE4 849 aa13.77□□□□□ -0.21
CTC1-204ENST00000578441 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
CTC1-204ENST00000578441 TJP1Q07157 1748 aa13.76□□□□□ -0.21
CTC1-204ENST00000578441 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
CTC1-204ENST00000578441 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
CTC1-204ENST00000578441 IL13P35225 146 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 AKAP4Q5JQC9 854 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
CTC1-204ENST00000578441 MRC1P22897 1456 aa13.74□□□□□ -0.21
CTC1-204ENST00000578441 CRKLP46109 303 aaKnown RBP13.74□□□□□ -0.21
CTC1-204ENST00000578441 FSTL1Q12841 308 aa13.74□□□□□ -0.21
CTC1-204ENST00000578441 AMER1Q5JTC6 1135 aaPredicted RBP13.74□□□□□ -0.21
CTC1-204ENST00000578441 KLRG1Q96E93 195 aa13.74□□□□□ -0.21
CTC1-204ENST00000578441 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
CTC1-204ENST00000578441 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
CTC1-204ENST00000578441 PTCD1O75127 700 aaKnown RBP13.73□□□□□ -0.21
CTC1-204ENST00000578441 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
CTC1-204ENST00000578441 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
CTC1-204ENST00000578441 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
CTC1-204ENST00000578441 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
CTC1-204ENST00000578441 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
CTC1-204ENST00000578441 PRELPP51888 382 aa13.71□□□□□ -0.21
CTC1-204ENST00000578441 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
CTC1-204ENST00000578441 BCS1LQ9Y276 419 aa13.71□□□□□ -0.21
CTC1-204ENST00000578441 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
CTC1-204ENST00000578441 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 FCHSD2O94868 740 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 DPEP1P16444 411 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 INTS5Q6P9B9 1019 aaKnown RBP13.69□□□□□ -0.22
CTC1-204ENST00000578441 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
CTC1-204ENST00000578441 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
CTC1-204ENST00000578441 ZPR1O75312 459 aa13.68□□□□□ -0.22
CTC1-204ENST00000578441 KCNA3P22001 575 aa13.68□□□□□ -0.22
CTC1-204ENST00000578441 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
CTC1-204ENST00000578441 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
CTC1-204ENST00000578441 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
CTC1-204ENST00000578441 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
CTC1-204ENST00000578441 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
CTC1-204ENST00000578441 TM4SF1P30408 202 aa13.67□□□□□ -0.22
CTC1-204ENST00000578441 FKBP8Q14318 412 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms