RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
SNORD3B-1-201ENST00000577988 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
SNORD3B-1-201ENST00000577988 MRC1P22897 1456 aa18.36■□□□□ 0.53
SNORD3B-1-201ENST00000577988 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
SNORD3B-1-201ENST00000577988 MRS2Q9HD23 443 aa18.36■□□□□ 0.53
SNORD3B-1-201ENST00000577988 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
SNORD3B-1-201ENST00000577988 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
SNORD3B-1-201ENST00000577988 SIK1P57059 783 aa18.35■□□□□ 0.53
SNORD3B-1-201ENST00000577988 STK32BQ9NY57 414 aa18.35■□□□□ 0.53
SNORD3B-1-201ENST00000577988 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.53
SNORD3B-1-201ENST00000577988 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
SNORD3B-1-201ENST00000577988 SLC15A2Q16348 729 aa18.33■□□□□ 0.52
SNORD3B-1-201ENST00000577988 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
SNORD3B-1-201ENST00000577988 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
SNORD3B-1-201ENST00000577988 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
SNORD3B-1-201ENST00000577988 TMPOP42166 694 aaKnown RBP18.32■□□□□ 0.52
SNORD3B-1-201ENST00000577988 RIPK4P57078 832 aa18.31■□□□□ 0.52
SNORD3B-1-201ENST00000577988 R3HDM1Q15032 1099 aaKnown RBP18.31■□□□□ 0.52
SNORD3B-1-201ENST00000577988 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
SNORD3B-1-201ENST00000577988 TAF7Q15545 349 aaPredicted RBP18.29■□□□□ 0.52
SNORD3B-1-201ENST00000577988 MCM10Q7L590 875 aa18.29■□□□□ 0.52
SNORD3B-1-201ENST00000577988 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
SNORD3B-1-201ENST00000577988 SIPA1L3O60292 1781 aaPredicted RBP18.29■□□□□ 0.52
SNORD3B-1-201ENST00000577988 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
SNORD3B-1-201ENST00000577988 KCNQ4P56696 695 aa18.28■□□□□ 0.52
SNORD3B-1-201ENST00000577988 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
SNORD3B-1-201ENST00000577988 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
SNORD3B-1-201ENST00000577988 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 DIEXFQ68CQ4 756 aaKnown RBP18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
SNORD3B-1-201ENST00000577988 C5P01031 1676 aa18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 SLC39A6Q13433 755 aa18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
SNORD3B-1-201ENST00000577988 ITPK1Q13572 414 aa18.25■□□□□ 0.51
SNORD3B-1-201ENST00000577988 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
SNORD3B-1-201ENST00000577988 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
SNORD3B-1-201ENST00000577988 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
SNORD3B-1-201ENST00000577988 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
SNORD3B-1-201ENST00000577988 APAF1O14727 1248 aa18.24■□□□□ 0.51
SNORD3B-1-201ENST00000577988 AK7Q96M32 723 aa18.24■□□□□ 0.51
SNORD3B-1-201ENST00000577988 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
SNORD3B-1-201ENST00000577988 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 UBR2Q8IWV8 1755 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 NEUROD2Q15784 382 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
SNORD3B-1-201ENST00000577988 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
SNORD3B-1-201ENST00000577988 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
SNORD3B-1-201ENST00000577988 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
SNORD3B-1-201ENST00000577988 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
SNORD3B-1-201ENST00000577988 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
SNORD3B-1-201ENST00000577988 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
SNORD3B-1-201ENST00000577988 KCPQ6ZWJ8 1503 aa18.21■□□□□ 0.51
SNORD3B-1-201ENST00000577988 STARD3NLO95772 234 aa18.2■□□□□ 0.5
SNORD3B-1-201ENST00000577988 SSFA2P28290 1259 aa18.2■□□□□ 0.5
SNORD3B-1-201ENST00000577988 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
SNORD3B-1-201ENST00000577988 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 DNAJC10Q8IXB1 793 aa18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
SNORD3B-1-201ENST00000577988 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 KCNQ3O43525 872 aa18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 ADRA2BP18089 450 aa18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 SPON1Q9HCB6 807 aa18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
SNORD3B-1-201ENST00000577988 TUBGCP6Q96RT7 1819 aa18.17■□□□□ 0.5
SNORD3B-1-201ENST00000577988 GNPATO15228 680 aa18.17■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
SNORD3B-1-201ENST00000577988 MTFR1LQ9H019 292 aa18.17■□□□□ 0.5
SNORD3B-1-201ENST00000577988 TJP1Q07157 1748 aa18.17■□□□□ 0.5
SNORD3B-1-201ENST00000577988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CHL1O00533 1208 aa18.16■□□□□ 0.5
SNORD3B-1-201ENST00000577988 COL23A1Q86Y22 540 aaPredicted RBP18.16■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
SNORD3B-1-201ENST00000577988 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
SNORD3B-1-201ENST00000577988 KDM3BQ7LBC6 1761 aa18.15■□□□□ 0.5
SNORD3B-1-201ENST00000577988 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
SNORD3B-1-201ENST00000577988 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
SNORD3B-1-201ENST00000577988 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
SNORD3B-1-201ENST00000577988 CFAP44Q96MT7 982 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms