RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 FHDC1Q9C0D6 1143 aaPredicted RBP17.18■□□□□ 0.34
SSH2-205ENST00000577483 MRC1P22897 1456 aa17.17■□□□□ 0.34
SSH2-205ENST00000577483 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
SSH2-205ENST00000577483 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
SSH2-205ENST00000577483 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
SSH2-205ENST00000577483 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
SSH2-205ENST00000577483 CHD4Q14839 1912 aa17.16■□□□□ 0.34
SSH2-205ENST00000577483 ITPK1Q13572 414 aa17.16■□□□□ 0.34
SSH2-205ENST00000577483 LINC00116Q8NCU8 138 aa17.16■□□□□ 0.34
SSH2-205ENST00000577483 ARXQ96QS3 562 aa17.16■□□□□ 0.34
SSH2-205ENST00000577483 UTRNP46939 3433 aa17.15■□□□□ 0.34
SSH2-205ENST00000577483 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
SSH2-205ENST00000577483 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
SSH2-205ENST00000577483 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
SSH2-205ENST00000577483 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
SSH2-205ENST00000577483 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
SSH2-205ENST00000577483 MSH5O43196 834 aa17.13■□□□□ 0.33
SSH2-205ENST00000577483 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
SSH2-205ENST00000577483 AK7Q96M32 723 aa17.13■□□□□ 0.33
SSH2-205ENST00000577483 CABP4P57796 275 aa17.12■□□□□ 0.33
SSH2-205ENST00000577483 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
SSH2-205ENST00000577483 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
SSH2-205ENST00000577483 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
SSH2-205ENST00000577483 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
SSH2-205ENST00000577483 PHF14O94880 888 aa17.1■□□□□ 0.33
SSH2-205ENST00000577483 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
SSH2-205ENST00000577483 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
SSH2-205ENST00000577483 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
SSH2-205ENST00000577483 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
SSH2-205ENST00000577483 POLD1P28340 1107 aa17.1■□□□□ 0.33
SSH2-205ENST00000577483 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
SSH2-205ENST00000577483 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
SSH2-205ENST00000577483 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
SSH2-205ENST00000577483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
SSH2-205ENST00000577483 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
SSH2-205ENST00000577483 KIF13BQ9NQT8 1826 aa17.09■□□□□ 0.33
SSH2-205ENST00000577483 GNPATO15228 680 aa17.08■□□□□ 0.32
SSH2-205ENST00000577483 FLAD1Q8NFF5 587 aa17.08■□□□□ 0.32
SSH2-205ENST00000577483 SSFA2P28290 1259 aa17.07■□□□□ 0.32
SSH2-205ENST00000577483 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
SSH2-205ENST00000577483 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
SSH2-205ENST00000577483 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
SSH2-205ENST00000577483 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
SSH2-205ENST00000577483 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
SSH2-205ENST00000577483 NLGN2Q8NFZ4 835 aa17.05■□□□□ 0.32
SSH2-205ENST00000577483 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
SSH2-205ENST00000577483 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
SSH2-205ENST00000577483 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
SSH2-205ENST00000577483 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
SSH2-205ENST00000577483 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
SSH2-205ENST00000577483 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
SSH2-205ENST00000577483 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
SSH2-205ENST00000577483 PRKAR2BP31323 418 aa17.02■□□□□ 0.31
SSH2-205ENST00000577483 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.31
SSH2-205ENST00000577483 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
SSH2-205ENST00000577483 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
SSH2-205ENST00000577483 YY1P25490 414 aa17■□□□□ 0.31
SSH2-205ENST00000577483 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
SSH2-205ENST00000577483 CRKLP46109 303 aaKnown RBP16.99■□□□□ 0.31
SSH2-205ENST00000577483 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
SSH2-205ENST00000577483 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
SSH2-205ENST00000577483 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSH2-205ENST00000577483 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
SSH2-205ENST00000577483 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
SSH2-205ENST00000577483 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
SSH2-205ENST00000577483 ADRA2BP18089 450 aa16.97■□□□□ 0.31
SSH2-205ENST00000577483 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
SSH2-205ENST00000577483 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
SSH2-205ENST00000577483 INTS5Q6P9B9 1019 aaKnown RBP16.96■□□□□ 0.31
SSH2-205ENST00000577483 GPR162Q16538 588 aa16.96■□□□□ 0.3
SSH2-205ENST00000577483 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.3
SSH2-205ENST00000577483 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
SSH2-205ENST00000577483 FCHSD2O94868 740 aa16.95■□□□□ 0.3
SSH2-205ENST00000577483 MMP10P09238 476 aa16.95■□□□□ 0.3
SSH2-205ENST00000577483 GYS1P13807 737 aa16.95■□□□□ 0.3
SSH2-205ENST00000577483 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
SSH2-205ENST00000577483 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
SSH2-205ENST00000577483 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSH2-205ENST00000577483 RFC4P35249 363 aa16.94■□□□□ 0.3
SSH2-205ENST00000577483 TEFQ10587 303 aa16.94■□□□□ 0.3
SSH2-205ENST00000577483 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
SSH2-205ENST00000577483 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
SSH2-205ENST00000577483 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
SSH2-205ENST00000577483 NRXN2Q9P2S2 1712 aa16.94■□□□□ 0.3
SSH2-205ENST00000577483 SRP68Q9UHB9 627 aaKnown RBP16.93■□□□□ 0.3
SSH2-205ENST00000577483 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
SSH2-205ENST00000577483 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
SSH2-205ENST00000577483 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
SSH2-205ENST00000577483 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 ZNF496Q96IT1 587 aaPredicted RBP16.92■□□□□ 0.3
SSH2-205ENST00000577483 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 COL15A1P39059 1388 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms