RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
NDC80-204ENST00000575515 A0A0G2JLW4 131 aa13.89□□□□□ -0.19
NDC80-204ENST00000575515 CARD11Q9BXL7 1154 aa13.89□□□□□ -0.19
NDC80-204ENST00000575515 SBF1O95248 1867 aa13.89□□□□□ -0.19
NDC80-204ENST00000575515 FCHSD2O94868 740 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 TGFB2P61812 414 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 FSTL1Q12841 308 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
NDC80-204ENST00000575515 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
NDC80-204ENST00000575515 CYP27B1O15528 508 aa13.87□□□□□ -0.19
NDC80-204ENST00000575515 SIK1P57059 783 aa13.87□□□□□ -0.19
NDC80-204ENST00000575515 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
NDC80-204ENST00000575515 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
NDC80-204ENST00000575515 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
NDC80-204ENST00000575515 PIGBQ92521 554 aa13.86□□□□□ -0.19
NDC80-204ENST00000575515 DPEP1P16444 411 aa13.85□□□□□ -0.19
NDC80-204ENST00000575515 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
NDC80-204ENST00000575515 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
NDC80-204ENST00000575515 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
NDC80-204ENST00000575515 ITPK1Q13572 414 aa13.84□□□□□ -0.19
NDC80-204ENST00000575515 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
NDC80-204ENST00000575515 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
NDC80-204ENST00000575515 INSRP06213 1382 aa13.83□□□□□ -0.19
NDC80-204ENST00000575515 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
NDC80-204ENST00000575515 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
NDC80-204ENST00000575515 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
NDC80-204ENST00000575515 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
NDC80-204ENST00000575515 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
NDC80-204ENST00000575515 FLT4P35916 1363 aa13.83□□□□□ -0.2
NDC80-204ENST00000575515 TMF1P82094 1093 aa13.82□□□□□ -0.2
NDC80-204ENST00000575515 NLGN1Q8N2Q7 840 aa13.82□□□□□ -0.2
NDC80-204ENST00000575515 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
NDC80-204ENST00000575515 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
NDC80-204ENST00000575515 RTCBQ9Y3I0 505 aaKnown RBP13.82□□□□□ -0.2
NDC80-204ENST00000575515 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
NDC80-204ENST00000575515 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
NDC80-204ENST00000575515 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
NDC80-204ENST00000575515 SPG7Q9UQ90 795 aa13.81□□□□□ -0.2
NDC80-204ENST00000575515 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
NDC80-204ENST00000575515 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
NDC80-204ENST00000575515 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
NDC80-204ENST00000575515 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
NDC80-204ENST00000575515 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
NDC80-204ENST00000575515 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
NDC80-204ENST00000575515 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
NDC80-204ENST00000575515 FYB1O15117 783 aa13.78□□□□□ -0.2
NDC80-204ENST00000575515 RFC4P35249 363 aa13.78□□□□□ -0.2
NDC80-204ENST00000575515 DALRD3Q5D0E6 543 aaKnown RBP13.78□□□□□ -0.2
NDC80-204ENST00000575515 KIF24Q5T7B8 1368 aa13.78□□□□□ -0.2
NDC80-204ENST00000575515 PCNTO95613 3336 aa13.78□□□□□ -0.2
NDC80-204ENST00000575515 GYS1P13807 737 aa13.77□□□□□ -0.21
NDC80-204ENST00000575515 KCNA3P22001 575 aa13.77□□□□□ -0.21
NDC80-204ENST00000575515 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
NDC80-204ENST00000575515 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
NDC80-204ENST00000575515 KDRP35968 1356 aa13.76□□□□□ -0.21
NDC80-204ENST00000575515 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
NDC80-204ENST00000575515 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
NDC80-204ENST00000575515 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
NDC80-204ENST00000575515 NCAPD2Q15021 1401 aa13.75□□□□□ -0.21
NDC80-204ENST00000575515 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
NDC80-204ENST00000575515 DLEC1Q9Y238 1755 aa13.75□□□□□ -0.21
NDC80-204ENST00000575515 AFDNP55196 1824 aaKnown RBP13.74□□□□□ -0.21
NDC80-204ENST00000575515 PHKG2P15735 406 aa13.74□□□□□ -0.21
NDC80-204ENST00000575515 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
NDC80-204ENST00000575515 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
NDC80-204ENST00000575515 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
NDC80-204ENST00000575515 CHRNA5P30532 468 aa13.73□□□□□ -0.21
NDC80-204ENST00000575515 RASSF7Q02833 373 aa13.73□□□□□ -0.21
NDC80-204ENST00000575515 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
NDC80-204ENST00000575515 TESK2Q96S53 571 aa13.73□□□□□ -0.21
NDC80-204ENST00000575515 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
NDC80-204ENST00000575515 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
NDC80-204ENST00000575515 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
NDC80-204ENST00000575515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
NDC80-204ENST00000575515 TJP1Q07157 1748 aa13.71□□□□□ -0.21
NDC80-204ENST00000575515 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
NDC80-204ENST00000575515 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
NDC80-204ENST00000575515 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
NDC80-204ENST00000575515 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
NDC80-204ENST00000575515 DDR1Q08345 913 aa13.7□□□□□ -0.22
NDC80-204ENST00000575515 EYA1Q99502 592 aa13.7□□□□□ -0.22
NDC80-204ENST00000575515 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
NDC80-204ENST00000575515 GLTPD2A6NH11 291 aa13.69□□□□□ -0.22
NDC80-204ENST00000575515 LMNB1P20700 586 aa13.69□□□□□ -0.22
NDC80-204ENST00000575515 FKBP8Q14318 412 aa13.69□□□□□ -0.22
NDC80-204ENST00000575515 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
NDC80-204ENST00000575515 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
NDC80-204ENST00000575515 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
NDC80-204ENST00000575515 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
NDC80-204ENST00000575515 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
NDC80-204ENST00000575515 PTCD1O75127 700 aaKnown RBP13.67□□□□□ -0.22
NDC80-204ENST00000575515 SLC34A2O95436 690 aa13.67□□□□□ -0.22
NDC80-204ENST00000575515 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
NDC80-204ENST00000575515 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
NDC80-204ENST00000575515 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
NDC80-204ENST00000575515 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
NDC80-204ENST00000575515 CABP4P57796 275 aa13.66□□□□□ -0.22
NDC80-204ENST00000575515 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms