RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 N4BP2Q86UW6 1770 aaPredicted RBP11.02□□□□□ -0.65
NCBP3-204ENST00000574911 GNAI3P08754 354 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 PXDNLA1KZ92 1463 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 ERC2O15083 957 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 REC8O95072 547 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
NCBP3-204ENST00000574911 NUTM2GQ5VZR2 741 aa11.01□□□□□ -0.65
NCBP3-204ENST00000574911 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 PANK2Q9BZ23 570 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 FKBP5Q13451 457 aaPredicted RBP11□□□□□ -0.65
NCBP3-204ENST00000574911 ABTB2Q8N961 1025 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 ARXQ96QS3 562 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
NCBP3-204ENST00000574911 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
NCBP3-204ENST00000574911 IBTKQ9P2D0 1353 aaPredicted RBP10.99□□□□□ -0.65
NCBP3-204ENST00000574911 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
NCBP3-204ENST00000574911 BAG4O95429 457 aaKnown RBP10.99□□□□□ -0.65
NCBP3-204ENST00000574911 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
NCBP3-204ENST00000574911 ST18O60284 1047 aa10.99□□□□□ -0.65
NCBP3-204ENST00000574911 NUCB2P80303 420 aa10.99□□□□□ -0.65
NCBP3-204ENST00000574911 RRAGDQ9NQL2 400 aaPredicted RBP10.99□□□□□ -0.65
NCBP3-204ENST00000574911 PRKCSHP14314 528 aaPredicted RBP10.98□□□□□ -0.65
NCBP3-204ENST00000574911 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
NCBP3-204ENST00000574911 LTV1Q96GA3 475 aaPredicted RBP10.98□□□□□ -0.65
NCBP3-204ENST00000574911 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
NCBP3-204ENST00000574911 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
NCBP3-204ENST00000574911 MED1Q15648 1581 aaPredicted RBP10.98□□□□□ -0.65
NCBP3-204ENST00000574911 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
NCBP3-204ENST00000574911 NFAT5O94916 1531 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 MX1P20591 662 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 GAS2L3Q86XJ1 694 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 IP6K1Q92551 441 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 USP44Q9H0E7 712 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 LRRFIP2Q9Y608 721 aaKnown RBP10.97□□□□□ -0.65
NCBP3-204ENST00000574911 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 ESYT1Q9BSJ8 1104 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 PHF8Q9UPP1 1060 aa10.97□□□□□ -0.65
NCBP3-204ENST00000574911 LTN1O94822 1766 aa10.96□□□□□ -0.65
NCBP3-204ENST00000574911 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
NCBP3-204ENST00000574911 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
NCBP3-204ENST00000574911 KLHL40Q2TBA0 621 aa10.96□□□□□ -0.66
NCBP3-204ENST00000574911 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.66
NCBP3-204ENST00000574911 TSHZ3Q63HK5 1081 aa10.96□□□□□ -0.66
NCBP3-204ENST00000574911 SRCIN1Q9C0H9 1055 aa10.96□□□□□ -0.66
NCBP3-204ENST00000574911 AOX1Q06278 1338 aa10.95□□□□□ -0.66
NCBP3-204ENST00000574911 SSH3Q8TE77 659 aa10.95□□□□□ -0.66
NCBP3-204ENST00000574911 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
NCBP3-204ENST00000574911 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
NCBP3-204ENST00000574911 CHMLP26374 656 aa10.95□□□□□ -0.66
NCBP3-204ENST00000574911 IL17RAQ96F46 866 aa10.95□□□□□ -0.66
NCBP3-204ENST00000574911 PHAXQ9H814 394 aaKnown RBP10.95□□□□□ -0.66
NCBP3-204ENST00000574911 HOXB7P09629 217 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
NCBP3-204ENST00000574911 POLA2Q14181 598 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 ZGPATQ8N5A5 531 aaKnown RBP10.94□□□□□ -0.66
NCBP3-204ENST00000574911 KDM3BQ7LBC6 1761 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 PKP1Q13835 747 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 NBPF6Q5VWK0 638 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 NBPF4Q96M43 638 aa10.94□□□□□ -0.66
NCBP3-204ENST00000574911 PHRF1Q9P1Y6 1649 aaKnown RBP10.94□□□□□ -0.66
NCBP3-204ENST00000574911 RAB11FIP3O75154 756 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 LMBRD1Q9NUN5 540 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 ZDHHC9Q9Y397 364 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 MCCP23508 829 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 MCM2P49736 904 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 ANAPC15P60006 121 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 MCTP1Q6DN14 999 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
NCBP3-204ENST00000574911 RILPL2Q969X0 211 aa10.93□□□□□ -0.66
NCBP3-204ENST00000574911 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 UNC5CLQ8IV45 518 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 EPB41L2O43491 1005 aaKnown RBP10.92□□□□□ -0.66
NCBP3-204ENST00000574911 NEK4P51957 841 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 CUL4AQ13619 759 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 TMX3Q96JJ7 454 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 PALD1Q9ULE6 856 aa10.92□□□□□ -0.66
NCBP3-204ENST00000574911 ZNF445P59923 1031 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 AKAP4Q5JQC9 854 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 KCNQ3O43525 872 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 EIF2S2P20042 333 aaKnown RBP10.91□□□□□ -0.66
NCBP3-204ENST00000574911 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 IL1RAPL2Q9NP60 686 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
NCBP3-204ENST00000574911 CHPF2Q9P2E5 772 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 AK9Q5TCS8 1911 aa10.91□□□□□ -0.66
NCBP3-204ENST00000574911 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.66
NCBP3-204ENST00000574911 CLCN1P35523 988 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms