RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.31
PRPF8-208ENST00000573716 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
PRPF8-208ENST00000573716 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
PRPF8-208ENST00000573716 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
PRPF8-208ENST00000573716 FCHSD2O94868 740 aa17.01■□□□□ 0.31
PRPF8-208ENST00000573716 CAPN15O75808 1086 aa17■□□□□ 0.31
PRPF8-208ENST00000573716 TGFB2P61812 414 aa17■□□□□ 0.31
PRPF8-208ENST00000573716 TMF1P82094 1093 aa17■□□□□ 0.31
PRPF8-208ENST00000573716 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
PRPF8-208ENST00000573716 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
PRPF8-208ENST00000573716 DPEP1P16444 411 aa16.99■□□□□ 0.31
PRPF8-208ENST00000573716 HTRA3P83110 453 aa16.99■□□□□ 0.31
PRPF8-208ENST00000573716 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
PRPF8-208ENST00000573716 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
PRPF8-208ENST00000573716 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
PRPF8-208ENST00000573716 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
PRPF8-208ENST00000573716 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
PRPF8-208ENST00000573716 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
PRPF8-208ENST00000573716 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
PRPF8-208ENST00000573716 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
PRPF8-208ENST00000573716 C4AP0C0L4 1744 aa16.97■□□□□ 0.31
PRPF8-208ENST00000573716 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
PRPF8-208ENST00000573716 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
PRPF8-208ENST00000573716 PHKG2P15735 406 aa16.96■□□□□ 0.31
PRPF8-208ENST00000573716 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.31
PRPF8-208ENST00000573716 EYA1Q99502 592 aa16.96■□□□□ 0.31
PRPF8-208ENST00000573716 BRCA1P38398 1863 aaKnown RBP16.95■□□□□ 0.3
PRPF8-208ENST00000573716 RFC4P35249 363 aa16.95■□□□□ 0.3
PRPF8-208ENST00000573716 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
PRPF8-208ENST00000573716 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
PRPF8-208ENST00000573716 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
PRPF8-208ENST00000573716 KLRG1Q96E93 195 aa16.94■□□□□ 0.3
PRPF8-208ENST00000573716 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 GYS1P13807 737 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■□□ 16.8
PRPF8-208ENST00000573716 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
PRPF8-208ENST00000573716 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
PRPF8-208ENST00000573716 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
PRPF8-208ENST00000573716 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
PRPF8-208ENST00000573716 KDRP35968 1356 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
PRPF8-208ENST00000573716 FSTL1Q12841 308 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 SLC4A9Q96Q91 983 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
PRPF8-208ENST00000573716 DALRD3Q5D0E6 543 aaKnown RBP16.9■□□□□ 0.3
PRPF8-208ENST00000573716 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
PRPF8-208ENST00000573716 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
PRPF8-208ENST00000573716 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
PRPF8-208ENST00000573716 KCNA3P22001 575 aa16.89■□□□□ 0.29
PRPF8-208ENST00000573716 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
PRPF8-208ENST00000573716 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
PRPF8-208ENST00000573716 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
PRPF8-208ENST00000573716 JMYQ8N9B5 988 aa16.88■□□□□ 0.29
PRPF8-208ENST00000573716 SRP68Q9UHB9 627 aaKnown RBP16.88■□□□□ 0.29
PRPF8-208ENST00000573716 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
PRPF8-208ENST00000573716 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
PRPF8-208ENST00000573716 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
PRPF8-208ENST00000573716 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
PRPF8-208ENST00000573716 CHRNA5P30532 468 aa16.87■□□□□ 0.29
PRPF8-208ENST00000573716 CABP4P57796 275 aa16.87■□□□□ 0.29
PRPF8-208ENST00000573716 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
PRPF8-208ENST00000573716 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
PRPF8-208ENST00000573716 ZNF530Q6P9A1 599 aaPredicted RBP16.86■□□□□ 0.29
PRPF8-208ENST00000573716 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
PRPF8-208ENST00000573716 SBF1O95248 1867 aa16.86■□□□□ 0.29
PRPF8-208ENST00000573716 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
PRPF8-208ENST00000573716 FKBP8Q14318 412 aa16.85■□□□□ 0.29
PRPF8-208ENST00000573716 SMC1BQ8NDV3 1235 aa16.85■□□□□ 0.29
PRPF8-208ENST00000573716 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
PRPF8-208ENST00000573716 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
PRPF8-208ENST00000573716 DDR1Q08345 913 aa16.84■□□□□ 0.29
PRPF8-208ENST00000573716 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
PRPF8-208ENST00000573716 RASSF7Q02833 373 aa16.83■□□□□ 0.28
PRPF8-208ENST00000573716 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
PRPF8-208ENST00000573716 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
PRPF8-208ENST00000573716 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
PRPF8-208ENST00000573716 MTHFSP49914 203 aa16.81■□□□□ 0.28
PRPF8-208ENST00000573716 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
PRPF8-208ENST00000573716 TJP1Q07157 1748 aa16.8■□□□□ 0.28
PRPF8-208ENST00000573716 PRELPP51888 382 aa16.8■□□□□ 0.28
PRPF8-208ENST00000573716 ZPR1O75312 459 aa16.79■□□□□ 0.28
PRPF8-208ENST00000573716 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
PRPF8-208ENST00000573716 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
PRPF8-208ENST00000573716 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
PRPF8-208ENST00000573716 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
PRPF8-208ENST00000573716 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
PRPF8-208ENST00000573716 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
PRPF8-208ENST00000573716 TIAM2Q8IVF5 1701 aa16.77■□□□□ 0.28
PRPF8-208ENST00000573716 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.28
PRPF8-208ENST00000573716 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
PRPF8-208ENST00000573716 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
PRPF8-208ENST00000573716 LMNB1P20700 586 aa16.76■□□□□ 0.27
PRPF8-208ENST00000573716 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
PRPF8-208ENST00000573716 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
PRPF8-208ENST00000573716 GLTPD2A6NH11 291 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms