RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 SLC52A2Q9HAB3 445 aa28.09■■■□□ 2.09
ABR-221ENST00000573559 MAPK8IP3Q9UPT6 1336 aa28.09■■■□□ 2.09
ABR-221ENST00000573559 SLC15A2Q16348 729 aa28.08■■■□□ 2.09
ABR-221ENST00000573559 TAF1LQ8IZX4 1826 aa28.08■■■□□ 2.09
ABR-221ENST00000573559 LOC102724428A0A0B4J2F2 783 aa28.06■■■□□ 2.08
ABR-221ENST00000573559 SIK1P57059 783 aa28.06■■■□□ 2.08
ABR-221ENST00000573559 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
ABR-221ENST00000573559 PLEKHF1Q96S99 279 aa28.06■■■□□ 2.08
ABR-221ENST00000573559 DLG5Q8TDM6 1919 aa28.05■■■□□ 2.08
ABR-221ENST00000573559 RBM42Q9BTD8 480 aaKnown RBP28.05■■■□□ 2.08
ABR-221ENST00000573559 RTF1Q92541 710 aaKnown RBP28.04■■■□□ 2.08
ABR-221ENST00000573559 TUBGCP6Q96RT7 1819 aa28.04■■■□□ 2.08
ABR-221ENST00000573559 TEFQ10587 303 aa28.03■■■□□ 2.08
ABR-221ENST00000573559 IL17REQ8NFR9 667 aa28.03■■■□□ 2.08
ABR-221ENST00000573559 AKT1S1Q96B36 256 aa28.02■■■□□ 2.08
ABR-221ENST00000573559 SIPA1L3O60292 1781 aaPredicted RBP28.01■■■□□ 2.08
ABR-221ENST00000573559 CASZ1Q86V15 1759 aa28.01■■■□□ 2.08
ABR-221ENST00000573559 C4BP0C0L5 1744 aa28.01■■■□□ 2.07
ABR-221ENST00000573559 ATP6V1AP38606 617 aa28.01■■■□□ 2.07
ABR-221ENST00000573559 PTCD1O75127 700 aaKnown RBP28■■■□□ 2.07
ABR-221ENST00000573559 MCM10Q7L590 875 aa28■■■□□ 2.07
ABR-221ENST00000573559 CCDC146Q8IYE0 955 aa28■■■□□ 2.07
ABR-221ENST00000573559 QSER1Q2KHR3 1735 aa27.99■■■□□ 2.07
ABR-221ENST00000573559 NFE2L2Q16236 605 aa27.99■■■□□ 2.07
ABR-221ENST00000573559 TFCP2L1Q9NZI6 479 aa27.99■■■□□ 2.07
ABR-221ENST00000573559 CEMIPQ8WUJ3 1361 aa27.99■■■□□ 2.07
ABR-221ENST00000573559 HMGB2P26583 209 aaKnown RBP27.98■■■□□ 2.07
ABR-221ENST00000573559 SLC39A6Q13433 755 aa27.98■■■□□ 2.07
ABR-221ENST00000573559 CCDC184Q52MB2 194 aa27.98■■■□□ 2.07
ABR-221ENST00000573559 ADAMTS8Q9UP79 889 aa27.98■■■□□ 2.07
ABR-221ENST00000573559 ZNF831Q5JPB2 1677 aa27.97■■■□□ 2.07
ABR-221ENST00000573559 ITPK1Q13572 414 aa27.97■■■□□ 2.07
ABR-221ENST00000573559 DCTN1Q14203 1278 aa27.97■■■□□ 2.07
ABR-221ENST00000573559 PDGFDQ9GZP0 370 aaPredicted RBP27.97■■■□□ 2.07
ABR-221ENST00000573559 LINC00116Q8NCU8 138 aa27.96■■■□□ 2.07
ABR-221ENST00000573559 AK7Q96M32 723 aa27.96■■■□□ 2.07
ABR-221ENST00000573559 HTATSF1O43719 755 aaKnown RBP27.95■■■□□ 2.06
ABR-221ENST00000573559 SLC4A9Q96Q91 983 aa27.95■■■□□ 2.06
ABR-221ENST00000573559 LRP5O75197 1615 aa27.95■■■□□ 2.06
ABR-221ENST00000573559 TTC5Q8N0Z6 440 aa27.94■■■□□ 2.06
ABR-221ENST00000573559 MRS2Q9HD23 443 aa27.94■■■□□ 2.06
ABR-221ENST00000573559 COL5A3P25940 1745 aaPredicted RBP27.94■■■□□ 2.06
ABR-221ENST00000573559 UBR2Q8IWV8 1755 aa27.94■■■□□ 2.06
ABR-221ENST00000573559 KCPQ6ZWJ8 1503 aa27.93■■■□□ 2.06
ABR-221ENST00000573559 TJP1Q07157 1748 aa27.93■■■□□ 2.06
ABR-221ENST00000573559 RUNDC1Q96C34 613 aa27.93■■■□□ 2.06
ABR-221ENST00000573559 PNPLA7Q6ZV29 1317 aa27.92■■■□□ 2.06
ABR-221ENST00000573559 ZBTB7AO95365 584 aa27.91■■■□□ 2.06
ABR-221ENST00000573559 UBR3Q6ZT12 1888 aa27.91■■■□□ 2.06
ABR-221ENST00000573559 CICQ96RK0 1608 aaPredicted RBP27.9■■■□□ 2.06
ABR-221ENST00000573559 BTBD11A6QL63 1104 aa27.9■■■□□ 2.06
ABR-221ENST00000573559 MSH5O43196 834 aa27.9■■■□□ 2.06
ABR-221ENST00000573559 TMPOP42166 694 aaKnown RBP27.9■■■□□ 2.06
ABR-221ENST00000573559 RIPK4P57078 832 aa27.9■■■□□ 2.06
ABR-221ENST00000573559 RRP7AQ9Y3A4 280 aaKnown RBP27.9■■■□□ 2.06
ABR-221ENST00000573559 GNPATO15228 680 aa27.88■■■□□ 2.05
ABR-221ENST00000573559 PHF14O94880 888 aa27.88■■■□□ 2.05
ABR-221ENST00000573559 NEUROD2Q15784 382 aa27.88■■■□□ 2.05
ABR-221ENST00000573559 ZNF790Q6PG37 636 aa27.88■■■□□ 2.05
ABR-221ENST00000573559 THUMPD2Q9BTF0 503 aaKnown RBP27.88■■■□□ 2.05
ABR-221ENST00000573559 SPON1Q9HCB6 807 aa27.87■■■□□ 2.05
ABR-221ENST00000573559 LMOD3Q0VAK6 560 aa27.86■■■□□ 2.05
ABR-221ENST00000573559 COL23A1Q86Y22 540 aaPredicted RBP27.85■■■□□ 2.05
ABR-221ENST00000573559 DNAJC10Q8IXB1 793 aa27.85■■■□□ 2.05
ABR-221ENST00000573559 ATF5Q9Y2D1 282 aaPredicted RBP27.85■■■□□ 2.05
ABR-221ENST00000573559 TAF7Q15545 349 aaPredicted RBP27.84■■■□□ 2.05
ABR-221ENST00000573559 SMIM5Q71RC9 77 aa27.84■■■□□ 2.05
ABR-221ENST00000573559 ZNF496Q96IT1 587 aaPredicted RBP27.84■■■□□ 2.05
ABR-221ENST00000573559 MTFR1LQ9H019 292 aa27.84■■■□□ 2.05
ABR-221ENST00000573559 CNTNAP4Q9C0A0 1308 aa27.84■■■□□ 2.05
ABR-221ENST00000573559 MYH14Q7Z406 1995 aaKnown RBP27.83■■■□□ 2.05
ABR-221ENST00000573559 KCNQ3O43525 872 aa27.83■■■□□ 2.05
ABR-221ENST00000573559 AMIGO3Q86WK7 504 aa27.83■■■□□ 2.05
ABR-221ENST00000573559 FLAD1Q8NFF5 587 aa27.83■■■□□ 2.05
ABR-221ENST00000573559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.82■■■□□ 2.04
ABR-221ENST00000573559 CRKLP46109 303 aaKnown RBP27.82■■■□□ 2.04
ABR-221ENST00000573559 PNISRQ8TF01 805 aaKnown RBP27.82■■■□□ 2.04
ABR-221ENST00000573559 FMNL2Q96PY5 1086 aa27.82■■■□□ 2.04
ABR-221ENST00000573559 SSFA2P28290 1259 aa27.81■■■□□ 2.04
ABR-221ENST00000573559 RC3H1Q5TC82 1133 aaKnown RBP27.81■■■□□ 2.04
ABR-221ENST00000573559 VSIG10Q8N0Z9 540 aa27.81■■■□□ 2.04
ABR-221ENST00000573559 RTCBQ9Y3I0 505 aaKnown RBP27.81■■■□□ 2.04
ABR-221ENST00000573559 HEG1Q9ULI3 1381 aa27.81■■■□□ 2.04
ABR-221ENST00000573559 KDM3BQ7LBC6 1761 aa27.81■■■□□ 2.04
ABR-221ENST00000573559 SLC16A10Q8TF71 515 aa27.8■■■□□ 2.04
ABR-221ENST00000573559 MIS18AQ9NYP9 233 aa27.8■■■□□ 2.04
ABR-221ENST00000573559 APAF1O14727 1248 aa27.79■■■□□ 2.04
ABR-221ENST00000573559 PPP1R1BQ9UD71 204 aaPredicted RBP27.79■■■□□ 2.04
ABR-221ENST00000573559 SRCAPQ6ZRS2 3230 aa27.78■■■□□ 2.04
ABR-221ENST00000573559 CYP19A1P11511 503 aaPredicted RBP27.77■■■□□ 2.04
ABR-221ENST00000573559 CCDC87Q9NVE4 849 aa27.77■■■□□ 2.04
ABR-221ENST00000573559 RPS6KA4O75676 772 aa27.75■■■□□ 2.03
ABR-221ENST00000573559 MSL1Q68DK7 614 aa27.75■■■□□ 2.03
ABR-221ENST00000573559 TRIM35Q9UPQ4 493 aa27.75■■■□□ 2.03
ABR-221ENST00000573559 STARD3NLO95772 234 aa27.74■■■□□ 2.03
ABR-221ENST00000573559 PTGER2P43116 358 aa27.74■■■□□ 2.03
ABR-221ENST00000573559 TRAPPC3LQ5T215 181 aa27.74■■■□□ 2.03
ABR-221ENST00000573559 INTS5Q6P9B9 1019 aaKnown RBP27.74■■■□□ 2.03
ABR-221ENST00000573559 C4AP0C0L4 1744 aa27.74■■■□□ 2.03
ABR-221ENST00000573559 FAM9BQ8IZU0 186 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms