RNA–Protein interactions for RNA: ENST00000572840.1

RFWD3-206, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-206ENST00000572840 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
RFWD3-206ENST00000572840 TMEM106CQ9BVX2 250 aa12.94□□□□□ -0.34
RFWD3-206ENST00000572840 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFWD3-206ENST00000572840 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
RFWD3-206ENST00000572840 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
RFWD3-206ENST00000572840 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
RFWD3-206ENST00000572840 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
RFWD3-206ENST00000572840 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
RFWD3-206ENST00000572840 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
RFWD3-206ENST00000572840 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
RFWD3-206ENST00000572840 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
RFWD3-206ENST00000572840 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
RFWD3-206ENST00000572840 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
RFWD3-206ENST00000572840 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
RFWD3-206ENST00000572840 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-206ENST00000572840 DOT1LQ8TEK3 1739 aa12.9□□□□□ -0.34
RFWD3-206ENST00000572840 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
RFWD3-206ENST00000572840 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
RFWD3-206ENST00000572840 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
RFWD3-206ENST00000572840 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
RFWD3-206ENST00000572840 ROCK2O75116 1388 aaKnown RBP12.89□□□□□ -0.35
RFWD3-206ENST00000572840 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
RFWD3-206ENST00000572840 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
RFWD3-206ENST00000572840 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
RFWD3-206ENST00000572840 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
RFWD3-206ENST00000572840 LY75O60449 1722 aa12.88□□□□□ -0.35
RFWD3-206ENST00000572840 NSD2O96028 1365 aa12.87□□□□□ -0.35
RFWD3-206ENST00000572840 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
RFWD3-206ENST00000572840 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-206ENST00000572840 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-206ENST00000572840 TMC1Q8TDI8 760 aa12.87□□□□□ -0.35
RFWD3-206ENST00000572840 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-206ENST00000572840 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
RFWD3-206ENST00000572840 TRPC6Q9Y210 931 aa12.87□□□□□ -0.35
RFWD3-206ENST00000572840 ANKRD36BQ8N2N9 1353 aa12.86□□□□□ -0.35
RFWD3-206ENST00000572840 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
RFWD3-206ENST00000572840 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
RFWD3-206ENST00000572840 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
RFWD3-206ENST00000572840 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
RFWD3-206ENST00000572840 FBLN1P23142 703 aa12.84□□□□□ -0.35
RFWD3-206ENST00000572840 TIE1P35590 1138 aa12.84□□□□□ -0.35
RFWD3-206ENST00000572840 IP6K1Q92551 441 aa12.84□□□□□ -0.35
RFWD3-206ENST00000572840 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
RFWD3-206ENST00000572840 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
RFWD3-206ENST00000572840 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.35
RFWD3-206ENST00000572840 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
RFWD3-206ENST00000572840 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
RFWD3-206ENST00000572840 MEGF6O75095 1541 aa12.83□□□□□ -0.36
RFWD3-206ENST00000572840 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
RFWD3-206ENST00000572840 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
RFWD3-206ENST00000572840 ZMYND10O75800 440 aa12.82□□□□□ -0.36
RFWD3-206ENST00000572840 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
RFWD3-206ENST00000572840 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
RFWD3-206ENST00000572840 USP47Q96K76 1375 aa12.81□□□□□ -0.36
RFWD3-206ENST00000572840 HSPA6P17066 643 aa12.81□□□□□ -0.36
RFWD3-206ENST00000572840 ADCY9O60503 1353 aa12.81□□□□□ -0.36
RFWD3-206ENST00000572840 HOXC9P31274 260 aa12.8□□□□□ -0.36
RFWD3-206ENST00000572840 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
RFWD3-206ENST00000572840 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
RFWD3-206ENST00000572840 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
RFWD3-206ENST00000572840 C5P01031 1676 aa12.8□□□□□ -0.36
RFWD3-206ENST00000572840 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
RFWD3-206ENST00000572840 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
RFWD3-206ENST00000572840 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
RFWD3-206ENST00000572840 AMPHP49418 695 aa12.78□□□□□ -0.36
RFWD3-206ENST00000572840 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
RFWD3-206ENST00000572840 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
RFWD3-206ENST00000572840 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
RFWD3-206ENST00000572840 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
RFWD3-206ENST00000572840 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
RFWD3-206ENST00000572840 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
RFWD3-206ENST00000572840 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.37
RFWD3-206ENST00000572840 PHF14O94880 888 aa12.76□□□□□ -0.37
RFWD3-206ENST00000572840 COG3Q96JB2 828 aa12.76□□□□□ -0.37
RFWD3-206ENST00000572840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
RFWD3-206ENST00000572840 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
RFWD3-206ENST00000572840 KIF3CO14782 793 aa12.75□□□□□ -0.37
RFWD3-206ENST00000572840 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
RFWD3-206ENST00000572840 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
RFWD3-206ENST00000572840 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
RFWD3-206ENST00000572840 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
RFWD3-206ENST00000572840 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
RFWD3-206ENST00000572840 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
RFWD3-206ENST00000572840 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
RFWD3-206ENST00000572840 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
RFWD3-206ENST00000572840 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
RFWD3-206ENST00000572840 AK7Q96M32 723 aa12.73□□□□□ -0.37
RFWD3-206ENST00000572840 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
RFWD3-206ENST00000572840 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
RFWD3-206ENST00000572840 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
RFWD3-206ENST00000572840 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
RFWD3-206ENST00000572840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
RFWD3-206ENST00000572840 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
RFWD3-206ENST00000572840 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
RFWD3-206ENST00000572840 CYP27B1O15528 508 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms