RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 RXRBP28702 533 aa12.78□□□□□ -0.36
TOM1L1-210ENST00000572158 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
TOM1L1-210ENST00000572158 BRWD3Q6RI45 1802 aa12.77□□□□□ -0.36
TOM1L1-210ENST00000572158 ZNF853P0CG23 659 aa12.77□□□□□ -0.37
TOM1L1-210ENST00000572158 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
TOM1L1-210ENST00000572158 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
TOM1L1-210ENST00000572158 WDR63Q8IWG1 891 aa12.77□□□□□ -0.37
TOM1L1-210ENST00000572158 A0A0G2JS52 829 aa12.76□□□□□ -0.37
TOM1L1-210ENST00000572158 ABCB7O75027 752 aa12.76□□□□□ -0.37
TOM1L1-210ENST00000572158 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-210ENST00000572158 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-210ENST00000572158 RGS12O14924 1447 aa12.75□□□□□ -0.37
TOM1L1-210ENST00000572158 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
TOM1L1-210ENST00000572158 SLFN5Q08AF3 891 aa12.75□□□□□ -0.37
TOM1L1-210ENST00000572158 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
TOM1L1-210ENST00000572158 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
TOM1L1-210ENST00000572158 IL16Q14005 1332 aa12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 CHL1O00533 1208 aa12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 PDE3BQ13370 1112 aa12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 MRC1P22897 1456 aa12.74□□□□□ -0.37
TOM1L1-210ENST00000572158 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
TOM1L1-210ENST00000572158 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
TOM1L1-210ENST00000572158 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 ITGB4P16144 1822 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 KCNQ3O43525 872 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 KCNQ2O43526 872 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 KRT27Q7Z3Y8 459 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
TOM1L1-210ENST00000572158 EP400Q96L91 3159 aa12.71□□□□□ -0.37
TOM1L1-210ENST00000572158 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
TOM1L1-210ENST00000572158 BCL9O00512 1426 aa12.71□□□□□ -0.37
TOM1L1-210ENST00000572158 E9PSI1 815 aa12.71□□□□□ -0.38
TOM1L1-210ENST00000572158 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.38
TOM1L1-210ENST00000572158 TEFQ10587 303 aa12.71□□□□□ -0.38
TOM1L1-210ENST00000572158 PIGBQ92521 554 aa12.71□□□□□ -0.38
TOM1L1-210ENST00000572158 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.38
TOM1L1-210ENST00000572158 CABP4P57796 275 aa12.7□□□□□ -0.38
TOM1L1-210ENST00000572158 GNAI1P63096 354 aa12.7□□□□□ -0.38
TOM1L1-210ENST00000572158 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
TOM1L1-210ENST00000572158 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
TOM1L1-210ENST00000572158 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
TOM1L1-210ENST00000572158 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
TOM1L1-210ENST00000572158 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
TOM1L1-210ENST00000572158 BTBD11A6QL63 1104 aa12.68□□□□□ -0.38
TOM1L1-210ENST00000572158 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
TOM1L1-210ENST00000572158 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
TOM1L1-210ENST00000572158 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 ZNF790Q6PG37 636 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
TOM1L1-210ENST00000572158 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
TOM1L1-210ENST00000572158 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
TOM1L1-210ENST00000572158 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
TOM1L1-210ENST00000572158 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
TOM1L1-210ENST00000572158 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
TOM1L1-210ENST00000572158 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
TOM1L1-210ENST00000572158 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
TOM1L1-210ENST00000572158 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
TOM1L1-210ENST00000572158 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
TOM1L1-210ENST00000572158 BTAF1O14981 1849 aa12.64□□□□□ -0.39
TOM1L1-210ENST00000572158 VAMP4O75379 141 aa12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 TRIM37O94972 964 aa12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
TOM1L1-210ENST00000572158 C5P01031 1676 aa12.61□□□□□ -0.39
TOM1L1-210ENST00000572158 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
TOM1L1-210ENST00000572158 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
TOM1L1-210ENST00000572158 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
TOM1L1-210ENST00000572158 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
TOM1L1-210ENST00000572158 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
TOM1L1-210ENST00000572158 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 POLA2Q14181 598 aa12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 LY75O60449 1722 aa12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 TJP1Q07157 1748 aa12.58□□□□□ -0.4
TOM1L1-210ENST00000572158 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 KCNQ4P56696 695 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 ITPK1Q13572 414 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms