RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 MAPK8IP3Q9UPT6 1336 aa15.78■□□□□ 0.12
TRIM25-205ENST00000572021 NEFMP07197 916 aa15.78■□□□□ 0.12
TRIM25-205ENST00000572021 R3HDM1Q15032 1099 aaKnown RBP15.78■□□□□ 0.12
TRIM25-205ENST00000572021 MCM10Q7L590 875 aa15.78■□□□□ 0.12
TRIM25-205ENST00000572021 SLC52A2Q9HAB3 445 aa15.77■□□□□ 0.11
TRIM25-205ENST00000572021 CCNL1Q9UK58 526 aaPredicted RBP15.77■□□□□ 0.11
TRIM25-205ENST00000572021 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
TRIM25-205ENST00000572021 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
TRIM25-205ENST00000572021 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
TRIM25-205ENST00000572021 MRC1P22897 1456 aa15.76■□□□□ 0.11
TRIM25-205ENST00000572021 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
TRIM25-205ENST00000572021 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 PAPPAQ13219 1627 aa15.75■□□□□ 0.11
TRIM25-205ENST00000572021 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
TRIM25-205ENST00000572021 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
TRIM25-205ENST00000572021 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
TRIM25-205ENST00000572021 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
TRIM25-205ENST00000572021 TEFQ10587 303 aa15.74■□□□□ 0.11
TRIM25-205ENST00000572021 ZNF827Q17R98 1081 aa15.74■□□□□ 0.11
TRIM25-205ENST00000572021 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
TRIM25-205ENST00000572021 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
TRIM25-205ENST00000572021 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 C5P01031 1676 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 SIK1P57059 783 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 PNISRQ8TF01 805 aaKnown RBP15.73■□□□□ 0.11
TRIM25-205ENST00000572021 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
TRIM25-205ENST00000572021 TMPOP42166 694 aaKnown RBP15.72■□□□□ 0.11
TRIM25-205ENST00000572021 RIPK4P57078 832 aa15.72■□□□□ 0.11
TRIM25-205ENST00000572021 ATP6V1AP38606 617 aa15.71■□□□□ 0.11
TRIM25-205ENST00000572021 ITPK1Q13572 414 aa15.71■□□□□ 0.11
TRIM25-205ENST00000572021 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
TRIM25-205ENST00000572021 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
TRIM25-205ENST00000572021 TUBGCP6Q96RT7 1819 aa15.71■□□□□ 0.1
TRIM25-205ENST00000572021 SLC15A2Q16348 729 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 KCNQ3O43525 872 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 LINC00116Q8NCU8 138 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
TRIM25-205ENST00000572021 APAF1O14727 1248 aa15.69■□□□□ 0.1
TRIM25-205ENST00000572021 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
TRIM25-205ENST00000572021 C4BP0C0L5 1744 aa15.69■□□□□ 0.1
TRIM25-205ENST00000572021 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
TRIM25-205ENST00000572021 KCPQ6ZWJ8 1503 aa15.68■□□□□ 0.1
TRIM25-205ENST00000572021 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
TRIM25-205ENST00000572021 UBR2Q8IWV8 1755 aa15.68■□□□□ 0.1
TRIM25-205ENST00000572021 TJP1Q07157 1748 aa15.68■□□□□ 0.1
TRIM25-205ENST00000572021 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
TRIM25-205ENST00000572021 TFCP2L1Q9NZI6 479 aa15.67■□□□□ 0.1
TRIM25-205ENST00000572021 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
TRIM25-205ENST00000572021 ZNF790Q6PG37 636 aa15.66■□□□□ 0.1
TRIM25-205ENST00000572021 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
TRIM25-205ENST00000572021 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
TRIM25-205ENST00000572021 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
TRIM25-205ENST00000572021 COL5A3P25940 1745 aaPredicted RBP15.66■□□□□ 0.1
TRIM25-205ENST00000572021 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
TRIM25-205ENST00000572021 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
TRIM25-205ENST00000572021 CASZ1Q86V15 1759 aa15.65■□□□□ 0.1
TRIM25-205ENST00000572021 ZNF831Q5JPB2 1677 aa15.65■□□□□ 0.1
TRIM25-205ENST00000572021 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
TRIM25-205ENST00000572021 DNAJC10Q8IXB1 793 aa15.65■□□□□ 0.1
TRIM25-205ENST00000572021 AK7Q96M32 723 aa15.65■□□□□ 0.1
TRIM25-205ENST00000572021 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
TRIM25-205ENST00000572021 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
TRIM25-205ENST00000572021 MSH5O43196 834 aa15.63■□□□□ 0.09
TRIM25-205ENST00000572021 PHF14O94880 888 aa15.63■□□□□ 0.09
TRIM25-205ENST00000572021 ZBTB7AO95365 584 aa15.63■□□□□ 0.09
TRIM25-205ENST00000572021 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
TRIM25-205ENST00000572021 MYH14Q7Z406 1995 aaKnown RBP15.63■□□□□ 0.09
TRIM25-205ENST00000572021 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
TRIM25-205ENST00000572021 PRAMEF22A3QJZ6 481 aa15.62■□□□□ 0.09
TRIM25-205ENST00000572021 GNPATO15228 680 aa15.62■□□□□ 0.09
TRIM25-205ENST00000572021 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
TRIM25-205ENST00000572021 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
TRIM25-205ENST00000572021 QSER1Q2KHR3 1735 aa15.62■□□□□ 0.09
TRIM25-205ENST00000572021 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
TRIM25-205ENST00000572021 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
TRIM25-205ENST00000572021 FMNL2Q96PY5 1086 aa15.61■□□□□ 0.09
TRIM25-205ENST00000572021 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
TRIM25-205ENST00000572021 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
TRIM25-205ENST00000572021 HEG1Q9ULI3 1381 aa15.61■□□□□ 0.09
TRIM25-205ENST00000572021 CYP19A1P11511 503 aaPredicted RBP15.6■□□□□ 0.09
TRIM25-205ENST00000572021 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
TRIM25-205ENST00000572021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
TRIM25-205ENST00000572021 INTS5Q6P9B9 1019 aaKnown RBP15.59■□□□□ 0.09
TRIM25-205ENST00000572021 CNTNAP4Q9C0A0 1308 aa15.59■□□□□ 0.09
TRIM25-205ENST00000572021 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.09
TRIM25-205ENST00000572021 CCDC87Q9NVE4 849 aa15.58■□□□□ 0.08
TRIM25-205ENST00000572021 USP16Q9Y5T5 823 aa15.58■□□□□ 0.08
TRIM25-205ENST00000572021 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
TRIM25-205ENST00000572021 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
TRIM25-205ENST00000572021 RC3H1Q5TC82 1133 aaKnown RBP15.57■□□□□ 0.08
TRIM25-205ENST00000572021 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
TRIM25-205ENST00000572021 ZBTB1Q9Y2K1 713 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms