RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
PRPF8-203ENST00000571958 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
PRPF8-203ENST00000571958 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
PRPF8-203ENST00000571958 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
PRPF8-203ENST00000571958 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
PRPF8-203ENST00000571958 KDRP35968 1356 aa13.88□□□□□ -0.19
PRPF8-203ENST00000571958 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
PRPF8-203ENST00000571958 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
PRPF8-203ENST00000571958 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
PRPF8-203ENST00000571958 MMP10P09238 476 aa13.87□□□□□ -0.19
PRPF8-203ENST00000571958 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-203ENST00000571958 BRCA1P38398 1863 aaKnown RBP13.86□□□□□ -0.19
PRPF8-203ENST00000571958 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
PRPF8-203ENST00000571958 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
PRPF8-203ENST00000571958 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
PRPF8-203ENST00000571958 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
PRPF8-203ENST00000571958 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
PRPF8-203ENST00000571958 HSPA6P17066 643 aa13.84□□□□□ -0.19
PRPF8-203ENST00000571958 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
PRPF8-203ENST00000571958 KDM6AO15550 1401 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-203ENST00000571958 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-203ENST00000571958 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
PRPF8-203ENST00000571958 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
PRPF8-203ENST00000571958 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
PRPF8-203ENST00000571958 KIF3CO14782 793 aa13.82□□□□□ -0.2
PRPF8-203ENST00000571958 TJP1Q07157 1748 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 A0A0G2JLW4 131 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
PRPF8-203ENST00000571958 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 CNTNAP4Q9C0A0 1308 aa13.81□□□□□ -0.2
PRPF8-203ENST00000571958 ARFGEF1Q9Y6D6 1849 aa13.8□□□□□ -0.2
PRPF8-203ENST00000571958 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
PRPF8-203ENST00000571958 GYS1P13807 737 aa13.8□□□□□ -0.2
PRPF8-203ENST00000571958 TGFB2P61812 414 aa13.8□□□□□ -0.2
PRPF8-203ENST00000571958 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
PRPF8-203ENST00000571958 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
PRPF8-203ENST00000571958 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
PRPF8-203ENST00000571958 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
PRPF8-203ENST00000571958 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
PRPF8-203ENST00000571958 ADRA2BP18089 450 aa13.79□□□□□ -0.2
PRPF8-203ENST00000571958 RFC4P35249 363 aa13.79□□□□□ -0.2
PRPF8-203ENST00000571958 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
PRPF8-203ENST00000571958 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
PRPF8-203ENST00000571958 DPEP1P16444 411 aa13.78□□□□□ -0.2
PRPF8-203ENST00000571958 CABP4P57796 275 aa13.78□□□□□ -0.2
PRPF8-203ENST00000571958 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
PRPF8-203ENST00000571958 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
PRPF8-203ENST00000571958 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
PRPF8-203ENST00000571958 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
PRPF8-203ENST00000571958 ARHGAP27Q6ZUM4 889 aa13.77□□□□□ -0.21
PRPF8-203ENST00000571958 PANK3Q9H999 370 aa13.77□□□□□ -0.21
PRPF8-203ENST00000571958 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
PRPF8-203ENST00000571958 FCHSD2O94868 740 aa13.76□□□□□ -0.21
PRPF8-203ENST00000571958 MTHFSP49914 203 aa13.76□□□□□ -0.21
PRPF8-203ENST00000571958 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
PRPF8-203ENST00000571958 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
PRPF8-203ENST00000571958 KCNA3P22001 575 aa13.75□□□□□ -0.21
PRPF8-203ENST00000571958 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
PRPF8-203ENST00000571958 C1orf141Q5JVX7 400 aa13.75□□□□□ -0.21
PRPF8-203ENST00000571958 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
PRPF8-203ENST00000571958 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
PRPF8-203ENST00000571958 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
PRPF8-203ENST00000571958 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
PRPF8-203ENST00000571958 WDR90Q96KV7 1748 aa13.74□□□□□ -0.21
PRPF8-203ENST00000571958 TOMM70O94826 608 aa13.74□□□□□ -0.21
PRPF8-203ENST00000571958 DDR1Q08345 913 aa13.74□□□□□ -0.21
PRPF8-203ENST00000571958 FKBP8Q14318 412 aa13.74□□□□□ -0.21
PRPF8-203ENST00000571958 MORC1Q86VD1 984 aa13.74□□□□□ -0.21
PRPF8-203ENST00000571958 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF8-203ENST00000571958 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
PRPF8-203ENST00000571958 SBF1O95248 1867 aa13.73□□□□□ -0.21
PRPF8-203ENST00000571958 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
PRPF8-203ENST00000571958 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
PRPF8-203ENST00000571958 APLP1P51693 650 aa13.72□□□□□ -0.21
PRPF8-203ENST00000571958 C9orf131Q5VYM1 1079 aa13.72□□□□□ -0.21
PRPF8-203ENST00000571958 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
PRPF8-203ENST00000571958 KCPQ6ZWJ8 1503 aa13.71□□□□□ -0.21
PRPF8-203ENST00000571958 PIM2Q9P1W9 311 aa13.71□□□□□ -0.21
PRPF8-203ENST00000571958 TNRC6CQ9HCJ0 1690 aaKnown RBP13.71□□□□□ -0.21
PRPF8-203ENST00000571958 MRC1P22897 1456 aa13.7□□□□□ -0.22
PRPF8-203ENST00000571958 CHRNA5P30532 468 aa13.7□□□□□ -0.22
PRPF8-203ENST00000571958 IL13P35225 146 aa13.7□□□□□ -0.22
PRPF8-203ENST00000571958 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
PRPF8-203ENST00000571958 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
PRPF8-203ENST00000571958 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
PRPF8-203ENST00000571958 DLEC1Q9Y238 1755 aa13.7□□□□□ -0.22
PRPF8-203ENST00000571958 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
PRPF8-203ENST00000571958 DNAJC5GQ8N7S2 189 aa13.69□□□□□ -0.22
PRPF8-203ENST00000571958 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
PRPF8-203ENST00000571958 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
PRPF8-203ENST00000571958 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 LGR6Q9HBX8 967 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 RNF181Q9P0P0 153 aa13.68□□□□□ -0.22
PRPF8-203ENST00000571958 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms