RNA–Protein interactions for RNA: ENST00000571299.5

SLC12A4-207, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-207ENST00000571299 ATP6V1AP38606 617 aa22.04■■□□□ 1.12
SLC12A4-207ENST00000571299 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
SLC12A4-207ENST00000571299 TMF1P82094 1093 aa22.03■■□□□ 1.12
SLC12A4-207ENST00000571299 DNAJC5GQ8N7S2 189 aa22.03■■□□□ 1.12
SLC12A4-207ENST00000571299 NMRK2Q9NPI5 230 aa22.03■■□□□ 1.12
SLC12A4-207ENST00000571299 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
SLC12A4-207ENST00000571299 KIF24Q5T7B8 1368 aa22.02■■□□□ 1.12
SLC12A4-207ENST00000571299 HTRA3P83110 453 aa22.02■■□□□ 1.12
SLC12A4-207ENST00000571299 BCS1LQ9Y276 419 aa22.02■■□□□ 1.12
SLC12A4-207ENST00000571299 PHKG2P15735 406 aa22.01■■□□□ 1.11
SLC12A4-207ENST00000571299 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
SLC12A4-207ENST00000571299 KDRP35968 1356 aa22■■□□□ 1.11
SLC12A4-207ENST00000571299 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
SLC12A4-207ENST00000571299 SPG7Q9UQ90 795 aa22■■□□□ 1.11
SLC12A4-207ENST00000571299 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
SLC12A4-207ENST00000571299 COL5A3P25940 1745 aaPredicted RBP21.98■■□□□ 1.11
SLC12A4-207ENST00000571299 DPEP1P16444 411 aa21.98■■□□□ 1.11
SLC12A4-207ENST00000571299 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
SLC12A4-207ENST00000571299 ARHGAP27Q6ZUM4 889 aa21.97■■□□□ 1.11
SLC12A4-207ENST00000571299 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
SLC12A4-207ENST00000571299 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
SLC12A4-207ENST00000571299 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
SLC12A4-207ENST00000571299 KCNA3P22001 575 aa21.96■■□□□ 1.11
SLC12A4-207ENST00000571299 POLKQ9UBT6 870 aa21.96■■□□□ 1.11
SLC12A4-207ENST00000571299 WDR90Q96KV7 1748 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 TOMM70O94826 608 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 GYS1P13807 737 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 APLP1P51693 650 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 IFNL2Q8IZJ0 200 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 PCNTO95613 3336 aa21.95■■□□□ 1.1
SLC12A4-207ENST00000571299 TGFB2P61812 414 aa21.94■■□□□ 1.1
SLC12A4-207ENST00000571299 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
SLC12A4-207ENST00000571299 TRAPPC3LQ5T215 181 aa21.94■■□□□ 1.1
SLC12A4-207ENST00000571299 FCHSD2O94868 740 aa21.93■■□□□ 1.1
SLC12A4-207ENST00000571299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
SLC12A4-207ENST00000571299 RTCBQ9Y3I0 505 aaKnown RBP21.93■■□□□ 1.1
SLC12A4-207ENST00000571299 SLC24A1O60721 1099 aa21.92■■□□□ 1.1
SLC12A4-207ENST00000571299 HMGB2P26583 209 aaKnown RBP21.92■■□□□ 1.1
SLC12A4-207ENST00000571299 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
SLC12A4-207ENST00000571299 KDM6AO15550 1401 aaPredicted RBP21.91■■□□□ 1.1
SLC12A4-207ENST00000571299 C9orf131Q5VYM1 1079 aa21.91■■□□□ 1.1
SLC12A4-207ENST00000571299 SRP68Q9UHB9 627 aaKnown RBP21.91■■□□□ 1.1
SLC12A4-207ENST00000571299 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
SLC12A4-207ENST00000571299 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
SLC12A4-207ENST00000571299 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
SLC12A4-207ENST00000571299 NLGN1Q8N2Q7 840 aa21.89■■□□□ 1.09
SLC12A4-207ENST00000571299 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
SLC12A4-207ENST00000571299 RPS6KA4O75676 772 aa21.87■■□□□ 1.09
SLC12A4-207ENST00000571299 DDR1Q08345 913 aa21.87■■□□□ 1.09
SLC12A4-207ENST00000571299 COL13A1Q5TAT6 717 aaPredicted RBP21.87■■□□□ 1.09
SLC12A4-207ENST00000571299 CNTNAP4Q9C0A0 1308 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 CHRNA5P30532 468 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 RFC4P35249 363 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 FKBP8Q14318 412 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 RC3H1Q5TC82 1133 aaKnown RBP21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 PARP3Q9Y6F1 533 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 TJP1Q07157 1748 aa21.86■■□□□ 1.09
SLC12A4-207ENST00000571299 SBF1O95248 1867 aa21.85■■□□□ 1.09
SLC12A4-207ENST00000571299 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
SLC12A4-207ENST00000571299 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
SLC12A4-207ENST00000571299 ERVV-2B6SEH9 535 aa21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 CDCA8Q53HL2 280 aa21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 AEBP1Q8IUX7 1158 aa21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 RBM46Q8TBY0 533 aaKnown RBP21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 DCAF5Q96JK2 942 aa21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 RRAGCQ9HB90 399 aa21.83■■□□□ 1.09
SLC12A4-207ENST00000571299 ADRA2BP18089 450 aa21.82■■□□□ 1.08
SLC12A4-207ENST00000571299 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
SLC12A4-207ENST00000571299 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
SLC12A4-207ENST00000571299 RNF181Q9P0P0 153 aa21.82■■□□□ 1.08
SLC12A4-207ENST00000571299 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
SLC12A4-207ENST00000571299 PRELPP51888 382 aa21.81■■□□□ 1.08
SLC12A4-207ENST00000571299 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
SLC12A4-207ENST00000571299 POLR3GLQ9BT43 218 aa21.81■■□□□ 1.08
SLC12A4-207ENST00000571299 CABP4P57796 275 aa21.8■■□□□ 1.08
SLC12A4-207ENST00000571299 RASSF7Q02833 373 aa21.8■■□□□ 1.08
SLC12A4-207ENST00000571299 PIM2Q9P1W9 311 aa21.8■■□□□ 1.08
SLC12A4-207ENST00000571299 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
SLC12A4-207ENST00000571299 CAPN15O75808 1086 aa21.79■■□□□ 1.08
SLC12A4-207ENST00000571299 DALRD3Q5D0E6 543 aaKnown RBP21.78■■□□□ 1.08
SLC12A4-207ENST00000571299 JMYQ8N9B5 988 aa21.78■■□□□ 1.08
SLC12A4-207ENST00000571299 NFATC2IPQ8NCF5 419 aa21.78■■□□□ 1.08
SLC12A4-207ENST00000571299 POLRMTO00411 1230 aaKnown RBP21.77■■□□□ 1.08
SLC12A4-207ENST00000571299 INTS5Q6P9B9 1019 aaKnown RBP21.77■■□□□ 1.08
SLC12A4-207ENST00000571299 C16orf71Q8IYS4 520 aaPredicted RBP21.77■■□□□ 1.08
SLC12A4-207ENST00000571299 PLEKHG2Q9H7P9 1386 aa21.76■■□□□ 1.07
SLC12A4-207ENST00000571299 AFDNP55196 1824 aaKnown RBP21.76■■□□□ 1.07
SLC12A4-207ENST00000571299 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
SLC12A4-207ENST00000571299 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
SLC12A4-207ENST00000571299 TM4SF1P30408 202 aa21.75■■□□□ 1.07
SLC12A4-207ENST00000571299 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
SLC12A4-207ENST00000571299 MTHFSP49914 203 aa21.74■■□□□ 1.07
SLC12A4-207ENST00000571299 FSTL1Q12841 308 aa21.73■■□□□ 1.07
SLC12A4-207ENST00000571299 USPL1Q5W0Q7 1092 aa21.73■■□□□ 1.07
SLC12A4-207ENST00000571299 DNAJC10Q8IXB1 793 aa21.73■■□□□ 1.07
SLC12A4-207ENST00000571299 SCN11AQ9UI33 1791 aa21.73■■□□□ 1.07
SLC12A4-207ENST00000571299 KDM2BQ8NHM5 1336 aa21.72■■□□□ 1.07
SLC12A4-207ENST00000571299 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
SLC12A4-207ENST00000571299 LGR6Q9HBX8 967 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms