RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-210ENST00000571120 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
ABR-210ENST00000571120 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
ABR-210ENST00000571120 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
ABR-210ENST00000571120 ITPK1Q13572 414 aa16.42■□□□□ 0.22
ABR-210ENST00000571120 MRC1P22897 1456 aa16.42■□□□□ 0.22
ABR-210ENST00000571120 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
ABR-210ENST00000571120 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
ABR-210ENST00000571120 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
ABR-210ENST00000571120 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
ABR-210ENST00000571120 POLD1P28340 1107 aa16.4■□□□□ 0.22
ABR-210ENST00000571120 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
ABR-210ENST00000571120 AK7Q96M32 723 aa16.4■□□□□ 0.22
ABR-210ENST00000571120 HMOX1P09601 288 aa16.39■□□□□ 0.21
ABR-210ENST00000571120 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
ABR-210ENST00000571120 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
ABR-210ENST00000571120 SSFA2P28290 1259 aa16.38■□□□□ 0.21
ABR-210ENST00000571120 CABP4P57796 275 aa16.38■□□□□ 0.21
ABR-210ENST00000571120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
ABR-210ENST00000571120 TJP1Q07157 1748 aa16.36■□□□□ 0.21
ABR-210ENST00000571120 MSH5O43196 834 aa16.36■□□□□ 0.21
ABR-210ENST00000571120 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
ABR-210ENST00000571120 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
ABR-210ENST00000571120 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
ABR-210ENST00000571120 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
ABR-210ENST00000571120 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
ABR-210ENST00000571120 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 GNPATO15228 680 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 PHF14O94880 888 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
ABR-210ENST00000571120 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
ABR-210ENST00000571120 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
ABR-210ENST00000571120 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.2
ABR-210ENST00000571120 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
ABR-210ENST00000571120 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
ABR-210ENST00000571120 C4AP0C0L4 1744 aa16.33■□□□□ 0.2
ABR-210ENST00000571120 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
ABR-210ENST00000571120 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
ABR-210ENST00000571120 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
ABR-210ENST00000571120 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
ABR-210ENST00000571120 YY1P25490 414 aa16.31■□□□□ 0.2
ABR-210ENST00000571120 CHD4Q14839 1912 aa16.3■□□□□ 0.2
ABR-210ENST00000571120 U2SURPO15042 1029 aaKnown RBP16.3■□□□□ 0.2
ABR-210ENST00000571120 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
ABR-210ENST00000571120 ADRA2BP18089 450 aa16.29■□□□□ 0.2
ABR-210ENST00000571120 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
ABR-210ENST00000571120 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
ABR-210ENST00000571120 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
ABR-210ENST00000571120 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
ABR-210ENST00000571120 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
ABR-210ENST00000571120 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
ABR-210ENST00000571120 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.2
ABR-210ENST00000571120 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
ABR-210ENST00000571120 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
ABR-210ENST00000571120 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
ABR-210ENST00000571120 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.2
ABR-210ENST00000571120 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
ABR-210ENST00000571120 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
ABR-210ENST00000571120 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
ABR-210ENST00000571120 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
ABR-210ENST00000571120 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
ABR-210ENST00000571120 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
ABR-210ENST00000571120 GYS1P13807 737 aa16.25■□□□□ 0.19
ABR-210ENST00000571120 PRKAR2BP31323 418 aa16.25■□□□□ 0.19
ABR-210ENST00000571120 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
ABR-210ENST00000571120 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
ABR-210ENST00000571120 GPR162Q16538 588 aa16.24■□□□□ 0.19
ABR-210ENST00000571120 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
ABR-210ENST00000571120 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
ABR-210ENST00000571120 MMP10P09238 476 aa16.23■□□□□ 0.19
ABR-210ENST00000571120 NUDCQ9Y266 331 aa16.23■□□□□ 0.19
ABR-210ENST00000571120 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
ABR-210ENST00000571120 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
ABR-210ENST00000571120 FCHSD2O94868 740 aa16.22■□□□□ 0.19
ABR-210ENST00000571120 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
ABR-210ENST00000571120 NLGN1Q8N2Q7 840 aa16.22■□□□□ 0.19
ABR-210ENST00000571120 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
ABR-210ENST00000571120 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
ABR-210ENST00000571120 RFC4P35249 363 aa16.21■□□□□ 0.19
ABR-210ENST00000571120 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
ABR-210ENST00000571120 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
ABR-210ENST00000571120 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
ABR-210ENST00000571120 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
ABR-210ENST00000571120 TEFQ10587 303 aa16.19■□□□□ 0.18
ABR-210ENST00000571120 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
ABR-210ENST00000571120 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
ABR-210ENST00000571120 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
ABR-210ENST00000571120 COL15A1P39059 1388 aa16.18■□□□□ 0.18
ABR-210ENST00000571120 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
ABR-210ENST00000571120 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
ABR-210ENST00000571120 ZNF784Q8NCA9 323 aaPredicted RBP16.18■□□□□ 0.18
ABR-210ENST00000571120 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
ABR-210ENST00000571120 BRCA1P38398 1863 aaKnown RBP16.17■□□□□ 0.18
ABR-210ENST00000571120 FKBP8Q14318 412 aa16.17■□□□□ 0.18
ABR-210ENST00000571120 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
ABR-210ENST00000571120 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
ABR-210ENST00000571120 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
ABR-210ENST00000571120 PLEKHF1Q96S99 279 aa16.16■□□□□ 0.18
ABR-210ENST00000571120 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms