RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
CDC27-212ENST00000570818 POU4F2Q12837 409 aa12.19□□□□□ -0.46
CDC27-212ENST00000570818 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
CDC27-212ENST00000570818 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
CDC27-212ENST00000570818 DNAAF2Q9NVR5 837 aaKnown RBP12.18□□□□□ -0.46
CDC27-212ENST00000570818 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
CDC27-212ENST00000570818 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
CDC27-212ENST00000570818 ITGA6P23229 1130 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 SMTNP53814 917 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
CDC27-212ENST00000570818 TIMMDC1Q9NPL8 285 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
CDC27-212ENST00000570818 TMEM229AB2RXF0 380 aa12.16□□□□□ -0.46
CDC27-212ENST00000570818 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
CDC27-212ENST00000570818 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
CDC27-212ENST00000570818 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
CDC27-212ENST00000570818 CCDC102BQ68D86 513 aa12.15□□□□□ -0.46
CDC27-212ENST00000570818 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
CDC27-212ENST00000570818 TPCN2Q8NHX9 752 aa12.15□□□□□ -0.46
CDC27-212ENST00000570818 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
CDC27-212ENST00000570818 VSIG8P0DPA2 414 aa12.14□□□□□ -0.47
CDC27-212ENST00000570818 RASA1P20936 1047 aa12.14□□□□□ -0.47
CDC27-212ENST00000570818 GMCL1Q96IK5 515 aa12.14□□□□□ -0.47
CDC27-212ENST00000570818 A6NJY4 79 aa12.13□□□□□ -0.47
CDC27-212ENST00000570818 LCE2AQ5TA79 106 aaPredicted RBP12.13□□□□□ -0.47
CDC27-212ENST00000570818 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
CDC27-212ENST00000570818 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
CDC27-212ENST00000570818 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 CDC14CA4D256 554 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 H7C1W4 665 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 CLDN10P78369 228 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 RIPOR1Q6ZS17 1223 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 SV2AQ7L0J3 742 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDC27-212ENST00000570818 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
CDC27-212ENST00000570818 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
CDC27-212ENST00000570818 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
CDC27-212ENST00000570818 ZNF358Q9NW07 568 aa12.12□□□□□ -0.47
CDC27-212ENST00000570818 CDK2AP1O14519 115 aa12.11□□□□□ -0.47
CDC27-212ENST00000570818 PHKA2P46019 1235 aa12.11□□□□□ -0.47
CDC27-212ENST00000570818 MTFR1Q15390 333 aa12.11□□□□□ -0.47
CDC27-212ENST00000570818 C4orf17Q53FE4 359 aa12.11□□□□□ -0.47
CDC27-212ENST00000570818 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
CDC27-212ENST00000570818 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
CDC27-212ENST00000570818 SIX5Q8N196 739 aa12.1□□□□□ -0.47
CDC27-212ENST00000570818 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
CDC27-212ENST00000570818 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
CDC27-212ENST00000570818 F11P03951 625 aa12.09□□□□□ -0.47
CDC27-212ENST00000570818 VWA5B2Q8N398 1253 aa12.09□□□□□ -0.47
CDC27-212ENST00000570818 M0R2N6 131 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 WIPF1O43516 503 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 CSB-PGBD3P0DP91 1061 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 TRIM22Q8IYM9 498 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
CDC27-212ENST00000570818 FAM196BA6NMK8 535 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 GMPRP36959 345 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 PLA2G4AP47712 749 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 CABP1Q9NZU7 370 aa12.07□□□□□ -0.48
CDC27-212ENST00000570818 SEC13P55735 322 aa12.06□□□□□ -0.48
CDC27-212ENST00000570818 INSM1Q01101 510 aaPredicted RBP12.06□□□□□ -0.48
CDC27-212ENST00000570818 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
CDC27-212ENST00000570818 C1orf216Q8TAB5 229 aa12.06□□□□□ -0.48
CDC27-212ENST00000570818 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
CDC27-212ENST00000570818 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
CDC27-212ENST00000570818 RFX1P22670 979 aa12.05□□□□□ -0.48
CDC27-212ENST00000570818 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
CDC27-212ENST00000570818 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L12C9JPN9 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L21D6R901 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 GPAMQ9HCL2 828 aa12.04□□□□□ -0.48
CDC27-212ENST00000570818 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
CDC27-212ENST00000570818 PTK7Q13308 1070 aa12.03□□□□□ -0.48
CDC27-212ENST00000570818 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CDC27-212ENST00000570818 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
CDC27-212ENST00000570818 TNS4Q8IZW8 715 aa12.03□□□□□ -0.48
CDC27-212ENST00000570818 ZNF837Q96EG3 531 aaPredicted RBP12.03□□□□□ -0.48
CDC27-212ENST00000570818 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
CDC27-212ENST00000570818 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
CDC27-212ENST00000570818 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.49
CDC27-212ENST00000570818 MSX1P28360 303 aa12.02□□□□□ -0.49
CDC27-212ENST00000570818 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
CDC27-212ENST00000570818 EFHC2Q5JST6 749 aa12.02□□□□□ -0.49
CDC27-212ENST00000570818 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
CDC27-212ENST00000570818 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms