RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 FCHSD2O94868 740 aa13.12□□□□□ -0.31
GTF3C1-212ENST00000570129 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-212ENST00000570129 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
GTF3C1-212ENST00000570129 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 SIK1P57059 783 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 ITGB4P16144 1822 aa13.11□□□□□ -0.31
GTF3C1-212ENST00000570129 PNPLA7Q6ZV29 1317 aa13.1□□□□□ -0.31
GTF3C1-212ENST00000570129 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
GTF3C1-212ENST00000570129 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-212ENST00000570129 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
GTF3C1-212ENST00000570129 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
GTF3C1-212ENST00000570129 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-212ENST00000570129 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-212ENST00000570129 TFCP2L1Q9NZI6 479 aa13.08□□□□□ -0.32
GTF3C1-212ENST00000570129 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
GTF3C1-212ENST00000570129 PHF14O94880 888 aa13.06□□□□□ -0.32
GTF3C1-212ENST00000570129 PTGER2P43116 358 aa13.06□□□□□ -0.32
GTF3C1-212ENST00000570129 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
GTF3C1-212ENST00000570129 LY75O60449 1722 aa13.05□□□□□ -0.32
GTF3C1-212ENST00000570129 MSH5O43196 834 aa13.05□□□□□ -0.32
GTF3C1-212ENST00000570129 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
GTF3C1-212ENST00000570129 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-212ENST00000570129 ADRA2BP18089 450 aa13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
GTF3C1-212ENST00000570129 GNPATO15228 680 aa13.03□□□□□ -0.32
GTF3C1-212ENST00000570129 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-212ENST00000570129 PIP4K2AP48426 406 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-212ENST00000570129 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
GTF3C1-212ENST00000570129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 RIPK4P57078 832 aa13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 TEFQ10587 303 aa13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
GTF3C1-212ENST00000570129 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 APAF1O14727 1248 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 ANP32CO43423 234 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 AK7Q96M32 723 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 KCPQ6ZWJ8 1503 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
GTF3C1-212ENST00000570129 MRC1P22897 1456 aa13□□□□□ -0.33
GTF3C1-212ENST00000570129 A1BGP04217 495 aa13□□□□□ -0.33
GTF3C1-212ENST00000570129 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
GTF3C1-212ENST00000570129 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
GTF3C1-212ENST00000570129 RUNDC1Q96C34 613 aa13□□□□□ -0.33
GTF3C1-212ENST00000570129 MRS2Q9HD23 443 aa13□□□□□ -0.33
GTF3C1-212ENST00000570129 USP16Q9Y5T5 823 aa13□□□□□ -0.33
GTF3C1-212ENST00000570129 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
GTF3C1-212ENST00000570129 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-212ENST00000570129 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
GTF3C1-212ENST00000570129 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
GTF3C1-212ENST00000570129 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
GTF3C1-212ENST00000570129 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
GTF3C1-212ENST00000570129 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
GTF3C1-212ENST00000570129 C5P01031 1676 aa12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 HTATSF1O43719 755 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
GTF3C1-212ENST00000570129 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-212ENST00000570129 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
GTF3C1-212ENST00000570129 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
GTF3C1-212ENST00000570129 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 TJP1Q07157 1748 aa12.95□□□□□ -0.34
GTF3C1-212ENST00000570129 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 FKBP8Q14318 412 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 ARXQ96QS3 562 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms