RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
PDXDC1-217ENST00000570001 USP31Q70CQ4 1352 aa14.27□□□□□ -0.13
PDXDC1-217ENST00000570001 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
PDXDC1-217ENST00000570001 NOL8Q76FK4 1167 aaKnown RBP14.27□□□□□ -0.13
PDXDC1-217ENST00000570001 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 MYL6BP14649 208 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 CABP4P57796 275 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 KIF24Q5T7B8 1368 aa14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
PDXDC1-217ENST00000570001 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 ANXA1P04083 346 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 CHRNA2Q15822 529 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 IL17REQ8NFR9 667 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 DDX11L8A8MPP1 907 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 DIAPH3Q9NSV4 1193 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 ERC2O15083 957 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 HSPA2P54652 639 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 RABEP1Q15276 862 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 ADGRB2O60241 1585 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
PDXDC1-217ENST00000570001 PTMSP20962 102 aa14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 L1TD1Q5T7N2 865 aaKnown RBP14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 LGR6Q9HBX8 967 aa14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 MX1P20591 662 aa14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 C16orf71Q8IYS4 520 aaPredicted RBP14.24□□□□□ -0.13
PDXDC1-217ENST00000570001 CABLES1Q8TDN4 633 aa14.23□□□□□ -0.13
PDXDC1-217ENST00000570001 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
PDXDC1-217ENST00000570001 RTL1A6NKG5 1358 aa14.23□□□□□ -0.13
PDXDC1-217ENST00000570001 UBR1Q8IWV7 1749 aa14.23□□□□□ -0.13
PDXDC1-217ENST00000570001 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 PLEKHM2Q8IWE5 1019 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 CNTROBQ8N137 903 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 RNMTO43148 476 aaKnown RBP14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 HYPKQ9NX55 129 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
PDXDC1-217ENST00000570001 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.13
PDXDC1-217ENST00000570001 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
PDXDC1-217ENST00000570001 ERC1Q8IUD2 1116 aa14.21□□□□□ -0.13
PDXDC1-217ENST00000570001 USP19O94966 1318 aa14.21□□□□□ -0.14
PDXDC1-217ENST00000570001 RAB11FIP3O75154 756 aa14.21□□□□□ -0.14
PDXDC1-217ENST00000570001 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.14
PDXDC1-217ENST00000570001 KIF1BPQ96EK5 621 aa14.21□□□□□ -0.14
PDXDC1-217ENST00000570001 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.14
PDXDC1-217ENST00000570001 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 SLIT1O75093 1534 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 FGD1P98174 961 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 ADGRL3Q9HAR2 1447 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
PDXDC1-217ENST00000570001 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 SDSP20132 328 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 ARHGAP23Q9P227 1491 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 MAP4K4O95819 1239 aaPredicted RBP14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 TSHZ3Q63HK5 1081 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 ARHGEF25Q86VW2 580 aa14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 CCDC9Q9Y3X0 531 aaKnown RBP14.19□□□□□ -0.14
PDXDC1-217ENST00000570001 NEK4P51957 841 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 SLC39A6Q13433 755 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 HOXB7P09629 217 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 LARP1Q6PKG0 1096 aaKnown RBP14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 PDE1AP54750 535 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 SIL1Q9H173 461 aa14.18□□□□□ -0.14
PDXDC1-217ENST00000570001 EIF4A1P60842 406 aaKnown RBP14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 GORABQ5T7V8 394 aa14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
PDXDC1-217ENST00000570001 NUCB2P80303 420 aa14.16□□□□□ -0.14
PDXDC1-217ENST00000570001 FMNL2Q96PY5 1086 aa14.16□□□□□ -0.14
PDXDC1-217ENST00000570001 NRXN3Q9Y4C0 1643 aa14.16□□□□□ -0.14
PDXDC1-217ENST00000570001 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
PDXDC1-217ENST00000570001 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
PDXDC1-217ENST00000570001 RIMS1Q86UR5 1692 aaKnown RBP14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 KSR2Q6VAB6 950 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 NFATC2IPQ8NCF5 419 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 AACSQ86V21 672 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 MYD88Q99836 296 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 KDRP35968 1356 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 KCNQ3O43525 872 aa14.15□□□□□ -0.14
PDXDC1-217ENST00000570001 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.15
PDXDC1-217ENST00000570001 SKOR2Q2VWA4 1001 aaPredicted RBP14.15□□□□□ -0.15
PDXDC1-217ENST00000570001 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.15
PDXDC1-217ENST00000570001 SNRPA1P09661 255 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms