RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 TLL1O43897 1013 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 CTHP32929 405 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 SLIT1O75093 1534 aa9.41□□□□□ -0.9
UBFD1-209ENST00000569919 NCOA2Q15596 1464 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 ARHGAP23Q9P227 1491 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 ADH1BP00325 375 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 MMP16P51512 607 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
UBFD1-209ENST00000569919 ZNF516Q92618 1163 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.9
UBFD1-209ENST00000569919 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.91
UBFD1-209ENST00000569919 SPATA31A6Q5VVP1 1343 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 CCNYL3P0C7X3 344 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 RXRBP28702 533 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 TRIM52Q96A61 297 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 SLC26A8Q96RN1 970 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 EVA1BQ9NVM1 165 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 FKBPLQ9UIM3 349 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 ABCC3O15438 1527 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
UBFD1-209ENST00000569919 CFAP65Q6ZU64 1925 aaKnown RBP9.39□□□□□ -0.91
UBFD1-209ENST00000569919 MSH6P52701 1360 aa9.38□□□□□ -0.91
UBFD1-209ENST00000569919 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
UBFD1-209ENST00000569919 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
UBFD1-209ENST00000569919 CAMSAP2Q08AD1 1489 aa9.38□□□□□ -0.91
UBFD1-209ENST00000569919 ROBO1Q9Y6N7 1651 aa9.38□□□□□ -0.91
UBFD1-209ENST00000569919 KCNH2Q12809 1159 aa9.37□□□□□ -0.91
UBFD1-209ENST00000569919 ALG2Q9H553 416 aa9.37□□□□□ -0.91
UBFD1-209ENST00000569919 ARHGAP31Q2M1Z3 1444 aa9.37□□□□□ -0.91
UBFD1-209ENST00000569919 IDI1Q13907 227 aa9.36□□□□□ -0.91
UBFD1-209ENST00000569919 ARHGEF5Q12774 1597 aa9.36□□□□□ -0.91
UBFD1-209ENST00000569919 FBXO45P0C2W1 286 aa9.35□□□□□ -0.91
UBFD1-209ENST00000569919 SOX11P35716 441 aa9.35□□□□□ -0.91
UBFD1-209ENST00000569919 NR1H3Q13133 447 aa9.35□□□□□ -0.91
UBFD1-209ENST00000569919 FGD6Q6ZV73 1430 aa9.35□□□□□ -0.91
UBFD1-209ENST00000569919 SLC6A16Q9GZN6 736 aa9.35□□□□□ -0.91
UBFD1-209ENST00000569919 PRDM15P57071 1507 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-209ENST00000569919 ZC3H4Q9UPT8 1303 aaKnown RBP9.34□□□□□ -0.91
UBFD1-209ENST00000569919 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.91
UBFD1-209ENST00000569919 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
UBFD1-209ENST00000569919 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
UBFD1-209ENST00000569919 PHLPP1O60346 1717 aa9.34□□□□□ -0.92
UBFD1-209ENST00000569919 NCOA3Q9Y6Q9 1424 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBFD1-209ENST00000569919 CCDC24Q8N4L8 307 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 NKX2-3Q8TAU0 364 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 SLC52A1Q9NWF4 448 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
UBFD1-209ENST00000569919 KANK1Q14678 1352 aa9.33□□□□□ -0.92
UBFD1-209ENST00000569919 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
UBFD1-209ENST00000569919 TET3O43151 1660 aa9.32□□□□□ -0.92
UBFD1-209ENST00000569919 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
UBFD1-209ENST00000569919 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
UBFD1-209ENST00000569919 CDK12Q9NYV4 1490 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-209ENST00000569919 ATF3P18847 181 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
UBFD1-209ENST00000569919 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 MAST1Q9Y2H9 1570 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 EFCAB6Q5THR3 1501 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
UBFD1-209ENST00000569919 S1PR4O95977 384 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
UBFD1-209ENST00000569919 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 UNC93B1Q9H1C4 597 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 QTRT2Q9H974 415 aaKnown RBP9.3□□□□□ -0.92
UBFD1-209ENST00000569919 RRP7BPQ9NSQ0 103 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 CEP152O94986 1710 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 PIK3C2BO00750 1634 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 MROH1Q8NDA8 1641 aa9.3□□□□□ -0.92
UBFD1-209ENST00000569919 KDM5AP29375 1690 aaKnown RBP9.29□□□□□ -0.92
UBFD1-209ENST00000569919 RBM6P78332 1123 aaKnown RBP9.29□□□□□ -0.92
UBFD1-209ENST00000569919 PTK2Q05397 1052 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 MYOM3Q5VTT5 1437 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 AFF2P51816 1311 aa9.29□□□□□ -0.92
UBFD1-209ENST00000569919 LRP6O75581 1613 aa9.28□□□□□ -0.92
UBFD1-209ENST00000569919 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
UBFD1-209ENST00000569919 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
UBFD1-209ENST00000569919 RFX1P22670 979 aa9.28□□□□□ -0.92
UBFD1-209ENST00000569919 CFAP70Q5T0N1 1121 aa9.28□□□□□ -0.92
UBFD1-209ENST00000569919 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBFD1-209ENST00000569919 LRRC59Q96AG4 307 aaKnown RBP9.28□□□□□ -0.92
UBFD1-209ENST00000569919 COL16A1Q07092 1604 aaPredicted RBP9.27□□□□□ -0.92
UBFD1-209ENST00000569919 KIF15Q9NS87 1388 aa9.27□□□□□ -0.93
UBFD1-209ENST00000569919 NGLY1Q96IV0 654 aa9.27□□□□□ -0.93
UBFD1-209ENST00000569919 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
UBFD1-209ENST00000569919 TFIP11Q9UBB9 837 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms